Atta colombica: 108686440
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Entry
108686440 CDS
T11098
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
acoc Atta colombica
Pathway
acoc04140
Autophagy - animal
acoc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108686440
04148 Efferocytosis
108686440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoc04131
]
108686440
Membrane trafficking [BR:
acoc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108686440
Hops complex
108686440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf-RING_16
zf_RING_Vps8
zf-C3H2C3
zf-RING_2
zf-C3HC4
zf-RING_Vps41
zf_RING_Vps8_fungal
zf-RING_UBOX
zf-rbx1
COMP
Motif
Other DBs
NCBI-GeneID:
108686440
NCBI-ProteinID:
XP_018047238
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MTSMFDQYEQASQRSKQVLAPPIRPDISTAGFIQMKLQDDGPIFTKQKVNFLPSDKILHL
VVSSNTIVIAMANNILLRIDMKQPDKTEEIDISKYALSMKMSGLFLDPLGHHLLITLVPR
HGENPLPELFYLHRKTTKLKQAGKFKGHEITAVGWNFSNASETSTGPILLGTAKGLIFET
EIGLETDKIFNTSLEQYWRQVFDIGKNSKPPITGIEFHKIPNSDKYVIIVTTLMRIYQYI
GAIGNPEEKPLLQQVFYRYLNAQETFNEVINSLSYSKMQFYYPSLGVLPKSFGWLTEAGI
LYAQVDAKPDTNNVLINQRMLTCPETSLMGSNGPQTTSIPLSFVLTEFHALLLYSDHVKG
ISLLNQELIFEDVYNDAVGKLIGITKDPATRSIWAYSERAVFKYKVTKEDRNVWQVYVDK
GEFELAKQYCKDNPAHIDQVLVKQAEMLFKNKEYEKSALIYADTHSSFEEISLKFLQEWQ
IEALKTFLCKKLDGLKTQDKTQITMIVIWVTELFMNQMGALRSSNTSYLHDMQYMELQKQ
FDSFLTIPKVEECIRRNRSTIYDLMASHGDKDNLIRLTIMHCNYEEVIRQHLYKNNYLEA
LGVLKSQNNKDLFYQFAGILLQELPRPTVAVLISQGSSLKPAKLLPALVSCNSDEKHAKE
IIKYLEFCVYKQGSQEQAIHNFLLSLYARYKQDEVMRYISSQGQDISMVHYDVHYALRLC
QEVSLTEACVQLSALLGLWITAVDLALTISVELAKQIAAMPSDHDDELRKKLWLKIAEHV
VREKDDIQQAMEFLQHCDLVRIEDILPFFSDFVTIDHFKEAICNSLQEYNQHIQDLKEEM
QEATKAAELIRKDIQAFRTRCTFVHARDTCNTCEVQLLLRPFYVFPCGHKFHSDCLVAAL
TPMLSMDQRTKLADLQRQFTAISNRPEDTTSITSVSLSTRDKIKTDIDELVASECLYCGE
LMIESIDKPFIEEEDYERVMKEWT
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatgtttgaccagtacgaacaagcttctcagcgttccaagcaagtactggca
ccaccaattcgtccggatattagcacagctggttttattcaaatgaagttacaagatgat
ggaccgatattcactaagcaaaaagtcaactttctgccatcggacaaaattcttcattta
gttgttagcagtaacacaattgtaatagctatggctaacaatattttgttgcgcattgac
atgaaacaacctgataaaactgaagaaattgacatatccaaatatgcactaagcatgaaa
atgtccggcttgtttttggatccattgggtcatcacttgttgataactctggtaccaagg
catggagagaatccacttccagaattattctacttacatagaaagacaacaaaactcaag
caggctggaaagttcaagggccacgaaatcaccgcagtgggttggaatttttctaatgct
tcggaaacgagtaccggtcctattttactgggtactgcgaagggcctgatttttgagaca
gagattggcttagagaccgacaagatttttaatacgagtttagagcagtattggcgtcag
gtatttgatataggaaaaaatagcaagcctccaatcactggaatagaattccacaaaatt
cctaattcggataaatacgtgatcatcgtaaccactcttatgcgcatttatcaatacatc
ggcgccattggcaatcctgaagagaagcctctcttacaacaagtgttctacagatatttg
aatgcacaagagaccttcaacgaagtaataaattctttatcatattcaaagatgcaattt
tattatccatcattgggcgtcctgccaaaatcttttggatggctgacggaagctggtatt
ctgtacgctcaggtggacgcgaaaccggacacaaacaatgtgctgataaaccaacggatg
ttgacatgcccggaaacgagtctcatgggtagtaacggtccgcaaaccacttcgataccg
ttatcttttgtgctgacggaattccatgcgctattgttgtattcagatcatgtgaagggc
atatcactgctaaatcaggaattgattttcgaagatgtttataacgatgcagtcggtaaa
ttaattggcattaccaaagatccggcgacaagatcgatttgggcttatagcgagcgagct
gttttcaaatataaagtaacgaaggaagataggaatgtttggcaggtatatgtcgataaa
ggcgaatttgaactagctaagcaatattgtaaagataatccggcacacatcgaccaagtg
ctcgtgaaacaagcagaaatgcttttcaagaataaagaatacgaaaagagtgctctaata
tacgctgacactcattcgtctttcgaggaaatttcattgaaatttttgcaggaatggcaa
atcgaagcactgaaaacgttcttatgtaagaaactcgacggcttgaagacacaagacaag
acgcagataacaatgattgtcatttgggtaacagagttgtttatgaatcaaatgggagct
ctccgcagtagcaacacatcctatcttcacgatatgcagtacatggaattgcagaagcag
tttgacagcttcctcactattccaaaagtcgaggaatgtatcaggagaaatcgcagcaca
atatacgacttaatggccagtcacggtgacaaagataatctgatacgtctgacaataatg
cactgcaattatgaggaagtgattcgtcaacatctgtataaaaataactatttagaggcg
ctaggggtgcttaaaagtcagaataataaagatctcttctatcaattcgccggcatattg
ttacaagagttgccacggcctacggtggctgtcttgatttcgcaaggatcctcactgaaa
ccagcaaagcttctgccagctttggtctcatgcaatagtgacgagaaacacgcgaaagaa
attattaaatatttggagttttgcgtatacaaacagggttcacaagagcaagcaattcac
aattttcttttgtccctgtatgcacgttacaagcaggacgaagtaatgcgatatataagc
tctcaaggtcaagatatcagcatggtgcactatgatgtgcattacgcgctgcgattgtgt
caagaggtaagcttgacagaagcctgtgtgcaattatcggctttactcggtctgtggatc
actgctgtagatcttgcgcttacaatcagtgtagaacttgccaagcagattgctgctatg
ccatctgatcatgatgacgagctgaggaaaaaactatggttgaagatagcggagcatgtg
gtacgagaaaaagacgacatacagcaagcaatggaatttttgcaacactgcgatttagtt
aggatagaagacattttaccttttttctccgatttcgtcacgattgatcatttcaaagaa
gctatttgcaattcgctgcaggaatataatcagcatattcaagatcttaaggaggagatg
caggaagccacgaaagcagcagagctaatacggaaagacattcaagccttcagaactaga
tgcacttttgtgcatgcgcgagacacatgtaatacatgtgaggtgcaactattgctgaga
cctttctatgtatttccctgcggtcataaatttcacagcgattgtttagtggcagcgtta
acgccgatgctatccatggatcagagaacaaaattagcagatcttcaacgacaatttaca
gctatttcaaatcggcccgaagataccacctcgataacttctgtgtcattgtccacgaga
gataaaatcaagactgatatcgatgaattggtcgcttcggagtgtctctattgtggagaa
cttatgatagaatcaatagataaaccattcattgaggaagaggattatgaacgcgtaatg
aaggaatggacgtaa
DBGET
integrated database retrieval system
