Atta colombica: 108686455
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Entry
108686455 CDS
T11098
Name
(RefSeq) transcription factor IIIB 90 kDa subunit
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoc03021
]
108686455
Transcription machinery [BR:
acoc03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
108686455
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
PhoU
Motif
Other DBs
NCBI-GeneID:
108686455
NCBI-ProteinID:
XP_018047269
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MSGNKCRNCGSTNIETDPGRGDAICIECGFVLEDSVIISQTTFEESSSGKVRVPGHFVAN
DSTGSATNFGASYYVNGKESRRITLQNARKGITHLCLQLGLNQNCIETSVNFYKMALCYH
LTRGRKQAHNQAACVYITCRIEKTEHMLIDISDVLHICVHELGRTYLRFTTALRIHIPAM
DPCLYIMRFAHKLEFGDKTHAVSMTALRVVQRMKRDSIHSGRRPSGLCGAALLIAARLHE
FSRSTADIIKIVKVHESTLRKRLLEFGDTPSSALTLDEFMTVDLEEEQDPPAFKAARKKD
RERLQKLENIDVEINELQAEIDKQLEDYRVGKVKKRKDASSIENEDADRFIRESNLSIIQ
QYVENNIGDSDEKIHDVILNENNSTLITGLGPDIASMISGNDHSKELNEKDNNFENSSEE
IYANDIDDEELDSYILSEKESQSKSALWNKVNADYLVQQKEKEEKRLKEKEEGKPEKKRR
RTTKKYKTPANTAGEAIEKMLQEKKISSKINYEVLKNLNNQQSNEDLPITNTSELDTISF
KKPITINSTLKSAEVLLTKKYPIKLNIPKTSLDKTLDNAYRKEDEVTKKEISSLEMDTPI
VDTSEIVYDDYLDEEEADAAEMSLGQMLESRATFESEFCDDGYEYE
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaaacaaatgtcgcaattgtggatctaccaatattgaaactgatcctggacgt
ggagatgcaatttgtatagaatgtggttttgtattagaagattcagttattattagtcaa
acaacttttgaagaatcatcctctggtaaagtaagagtacctggacattttgtcgctaat
gacagcacaggtagtgctacaaattttggtgcatcctattatgttaatggaaaagaatct
agaagaattactttacaaaatgcacggaaaggtataacacatctttgtttgcaattaggc
ttaaatcaaaattgcattgagacatcagtgaacttctataaaatggctttgtgttatcat
ttgactcgtggaaggaaacaagctcacaaccaggctgcttgtgtatatattacttgccgt
attgaaaaaactgaacatatgctcattgacattagcgatgttcttcatatttgtgttcac
gaacttggacggacatatctgcgatttactacagctctacgaatccacataccggcaatg
gatccttgtttatacatcatgagatttgcgcataaacttgaatttggtgataaaactcac
gccgtatctatgacagctttaagagttgttcaaagaatgaaaagggatagtattcatagt
ggccgtaggccatcaggtctatgtggcgcagctttattaatagctgcgcgattgcatgaa
tttagcagatcaactgctgatattataaaaattgttaaggtacacgaatctactctacgt
aaaagattgctggaatttggtgatacaccatccagtgccttaacattagacgaatttatg
acagtggatttagaagaagaacaggatcctccagcatttaaagcagcacgtaaaaaagat
agagaacgtttacaaaaattagaaaatatagatgtggaaataaatgagctgcaagcagaa
attgataaacaattagaagattatagagtaggaaaagtaaaaaaacgaaaggatgcttct
tctatagagaatgaggatgcagatagatttattcgggaaagtaatttgagcataatccaa
caatatgttgagaataatattggtgattctgatgagaaaattcatgatgtgattttaaat
gaaaacaatagtacacttataactggattaggtccggacatagcatctatgatatcagga
aatgatcattcaaaagaactcaacgagaaagataataattttgaaaattcttctgaagaa
atttacgcaaatgatatcgatgatgaagaattggacagttacattctttcggaaaaagaa
tcgcaatctaaatctgctctttggaataaagtaaacgctgattatcttgttcaacaaaaa
gaaaaggaagaaaaacgtttgaaagaaaaagaagaaggtaaacctgaaaagaaaagaaga
agaacgaccaaaaaatataaaacgcctgcgaatactgcaggcgaagcaattgaaaaaatg
ttgcaagaaaaaaagatatcttccaaaatcaattatgaagtgttgaaaaatttaaataat
caacaaagcaatgaagatttacctatcacaaacacatcggaattggacacaataagtttt
aaaaaaccgataacaattaattctacactgaagtctgcagaggttttattaacaaaaaaa
tatcctattaaactaaatatcccaaaaacatcattggataaaacattagataatgcatac
agaaaagaagatgaagttacaaaaaaagaaatcagttcactggaaatggatacacctata
gtggacacgtccgaaatagtatatgatgattatcttgatgaagaagaagctgatgctgcg
gaaatgtcacttggacagatgctcgaatctcgcgcaacatttgagagtgaattttgtgat
gatggttatgaatatgaatga
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