Atta colombica: 108686606
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Entry
108686606 CDS
T11098
Name
(RefSeq) F-box only protein 11
KO
K10297
F-box protein 11
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoc04121
]
108686606
Ubiquitin system [BR:
acoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108686606
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
zf-UBR
F-box
Bac_chlorC
Motif
Other DBs
NCBI-GeneID:
108686606
NCBI-ProteinID:
XP_018047494
LinkDB
All DBs
Position
Unknown
AA seq
938 aa
AA seq
DB search
MPSASFSSSRSYVRRSRRKNGNRIPLPRTAEPCDLPCPTANQIIPVVVGGGGGGSGARGS
SPSVSGVAAPSPSPQSHSSPYDLRRKSPPHPDPAPGTSSALPPSGGIAATFGSSSLPARK
RPRRTCSLSTDGINTNTAAHYLQYELPDEVLLTIFNYLMEQDLCRVSQVCKRFQVIANDT
ELWKSLYQQVYEYDLPLFNPGPCKFEFVSPDETEYQNPWKESFRQLYRGVHVRPGFQDLK
FKGRNLPYFNTVQGALDYVDEYRSNSASANSGATTAGGQGCCNSTSQTSGEDTSTQHLVF
LHAGTYRGEFLVIDSDVALIGAAPGNVAESVILERESESTVMFVEGAKRAYAGHLTLKFT
PDVTSTVPHHKHYCLEVGENCSPTVDHCIIRSSSVVGAAVCVSGVGANPLVKNCDISDCE
NVGLYVTDYAQGTYEDNEISRNALAGIWVKNYANPIMRRNHIHHGRDVGIFTFDNGLGYF
EANDIHNNRIAGFEVKAGANPTVVHCEIHHGQTGGIYVHENGLGQFIDNKIHSNNFAGVW
ITSNSNPTIRRNEIYNGHQGGVYIFGEGRGLIEHNNIYGNALAGIQIRTNSDPIVRHNKI
HHGQHGGIYVHEKGQGLIEENEVYANTLAGVWITTGSTPVLRRNRIHSGKQVGVYFYDNG
HGKLEDNDIFNHLYSGVQIRTGSNPVIRGNKIWGGQNGGVLVYNSGLGLLEQNEIFDNAM
AGVWIKTDSNPTLKRNKIFDGRDGGICIFNGGKGILEENDIFRNAQAGVLISTQSQPILR
RNRIFDGLAAGVEITNNATATLEFNQIFNNRFGGLCLASGVQPTTRGNKIFNNQDAVEKA
VGNGQCLYKISSYTSFPMHDFYRCQTCNTTDRNAICVNCIKTCHAGHDVEFIRHDRFFCD
CGAGTLSNQCQLQGEPTQDTDTLYDSAAPMESHTLMVN
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcgcgtcgttttcgtcgtcgcgcagctacgtgcggaggtcgcgtcggaaaaac
ggaaacaggatccccttgccgagaacggccgagccgtgcgatctaccatgtccaacggcc
aatcagatcattccagtagtagttggcggtggaggcggaggaagtggtgcacgaggctcg
tcccctagtgtatccggagttgctgctccctcaccgtcacctcaatcgcactcgtcgccg
tatgacctgagacgtaaaagtccaccacatcctgatccagcgcctggcacgagttccgct
cttccgccatcgggtggcattgctgctacttttggttcatcgtctttaccggcgaggaag
cgaccaagacgaacatgttcgttgtccacagatggtataaatacaaacacggcagcgcat
tacctccaatatgaactccccgatgaagtgctactcacaatatttaattatctaatggaa
caagatctttgtcgcgtatcgcaagtctgcaagcggttccaagtaattgcgaacgatacg
gaattatggaaatctctataccaacaggtctacgagtacgacctgccactatttaatcca
gggccatgtaaatttgagtttgtctcaccggacgaaactgaataccagaatccatggaag
gaaagttttaggcaactatatagaggcgtgcacgtgcgacctggctttcaagacttaaag
tttaagggccgtaatttgccgtacttcaacacggttcaaggcgcgttggattacgtcgat
gagtacaggagcaatagcgcatcggcaaacagcggtgctacaactgctggcggccaaggt
tgttgcaacagcacttcgcaaaccagcggagaggatacatcgacgcagcatttagtcttt
ttacacgctggcacatatagaggcgaattccttgtgatcgacagcgatgtagcattgatt
ggtgcagcgccaggaaatgtcgcggaatccgttattctggaacgagaaagcgagtcaacg
gttatgtttgtggaaggtgcaaaacgcgcttacgccgggcatcttacattgaaattcaca
cccgacgtcacgagtacggtaccccatcataaacactattgtttggaagttggcgaaaat
tgcagtcccactgttgatcattgtatcatcagaagctcgagtgttgttggtgcagcagtt
tgtgtatcaggtgtaggtgccaatccattagtgaagaactgcgacatatcagattgtgag
aatgttggattgtatgtgactgactacgcccagggcacatatgaggataatgaaatctca
cggaatgccctcgctggcatctgggtgaagaattacgcgaatcccatcatgcgacggaat
cacattcatcacggtcgcgatgtcggaatattcacgttcgataatgggcttggttacttt
gaagccaacgatattcacaacaatcggatagcaggttttgaagtaaaagctggtgctaat
cctactgttgttcattgtgaaatccatcatggccagactggaggtatttatgtgcacgag
aatggtctgggacaattcatcgataacaagattcattcaaacaattttgctggcgtatgg
attacgtcgaattctaacccgactatacgtcgaaatgaaatatacaatggccatcaaggt
ggagtgtacattttcggcgagggtagaggtttgatcgaacacaacaacatttacggcaac
gcactagctggtatacaaattagaacaaattcggatccgatcgtccggcacaataaaata
catcatggtcagcacggcggtatttatgtacacgaaaaaggccagggcttaatagaggaa
aacgaggtatatgccaatactttggcaggcgtatggatcacaacgggttcgacgccggtt
ttaaggcgaaatcgaattcacagtggtaaacaggtcggcgtatatttttacgacaacggc
catgggaaattggaagacaatgatattttcaatcacttatattcaggagtacaaataagg
actggaagtaatccggtcatacgtggtaataagatatggggaggacaaaacggcggagtt
ctagtgtataatagtggcttaggcttactcgaacaaaatgagatttttgacaatgcaatg
gctggcgtttggattaaaacagacagcaatccaactcttaaaagaaataagatattcgat
ggacgagatggcggaatttgcatatttaatggaggcaaaggtattttggaggagaatgac
atatttcgcaatgcgcaagcgggtgtgcttatatcgacacaatcgcaaccgattctgagg
aggaatcggattttcgacgggttggcggctggtgttgaaataactaacaacgccactgct
accctggaattcaatcaaatattcaataatcgattcggcggtctgtgtctggcgagtggg
gtgcaaccgacaactagaggcaataaaatatttaataatcaagacgcggtggagaaagca
gttgggaatggccaatgtttatacaaaatctcttcgtacacctccttccccatgcacgac
ttctatcgttgtcaaacgtgtaacacgacagatcgaaacgcgatatgcgtcaactgtata
aaaacttgtcatgccggtcacgatgtggaattcattagacatgatcgattcttttgcgat
tgcggcgccggaacattgagcaatcagtgtcaactgcagggtgaacctacgcaagacacg
gatacgttgtacgatagtgcggcgcccatggaatcgcatacacttatggtcaactag
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