Atta colombica: 108686703
Help
Entry
108686703 CDS
T11098
Name
(RefSeq) WD repeat-containing protein 18
KO
K14829
pre-rRNA-processing protein IPI3
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acoc03009
]
108686703
Ribosome biogenesis [BR:
acoc03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
108686703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_Vps41
NBCH_WD40
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_VPS8
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
WDR54
Ge1_WD40
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_NWD2_C
eIF2A
HSBP1
WD40_alt
Not3
Motif
Other DBs
NCBI-GeneID:
108686703
NCBI-ProteinID:
XP_018047625
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MNRVTDAKEVILTSDTTGESWSAAVWDPRNGSLLSVYKNATALGHRSLQLLSDSYVLGAD
ATRPRIHIWPLNSPSPLPNIRLNTPGKVNALTCTPNGSYLIASVGEKLFIWQTCNGRLLV
NLTRHYQTVSCLATTKDGSLFASAGEDGLVFVWSLYSALNDARCSPVHAFSNHSLPVRDL
HFGHGDARARLYTISLDRTANIYELGSGALLVSLVFDAPLTAITVNVRESKLFVGCTTGE
IFQCNLHEPPRGIEHHLTVSSCEESAVFQAHKSNVTALSVSMDCRTLLSGSTDGAVHVWD
IVSRQVLRTLKHKGPVTAAFFAKGFDNFRTSVLKPRLQVQSLQRTSDDGGRENVVEVVSR
GRNSAEILNFESYIEGSSDSRGSDQMSKKLDDLQKEINKLKKINAAIYQYGVTHILKKIV
DD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgagtaactgacgcgaaagaagtgatcttgacgagcgacaccaccggggagagt
tggagcgccgctgtgtgggatcctcggaacggctctctgttgtccgtgtacaagaacgcg
acagcacttggacatcgtagccttcagcttttgagcgacagctatgtgttgggagcggac
gctacgagacctcgcatacacatctggccattgaatagcccgtcaccgttgcccaatatt
cgattgaatacgccaggcaaagtcaatgccttgacctgcacaccaaatggatcttatcta
attgcctccgtgggagagaagctgttcatctggcagacatgcaacggcaggttactggtc
aatctgaccaggcattatcaaaccgtcagctgtctagccactacaaaagacggttcgtta
tttgctagcgctggcgaagacggtcttgtgttcgtatggtcgctctatagtgcgctgaac
gacgcacgttgttcgcctgttcacgctttctctaaccatagtttgccagtcagggatctg
cactttgggcatggtgacgctcgcgcgagattgtatacaatctcgctagatcgaaccgcg
aacatctatgagcttggcagtggagctctcctagtttccttggtgtttgacgcgccgctc
acagcgattaccgtgaacgtccgcgagagcaaactcttcgtgggctgcacaaccggcgag
atattccagtgtaacctgcacgaaccgccacgtggaatcgagcatcatctcacggtgagc
tcgtgcgaagagagcgccgtgtttcaggcgcacaagtcaaacgtgactgccctgtcggta
tccatggattgccgtactctgctgtccggatctaccgacggtgcagtccatgtctgggat
attgtcagccgacaggtgctcaggacactcaagcataaaggcccagttaccgctgcattt
tttgccaaaggctttgacaattttcgcacctctgtccttaaaccacgtttgcaggtgcaa
agtttacagaggacatcagacgatggtggcagagagaacgtcgtcgaggtcgtctccaga
ggacgaaattcggcggagatcctgaacttcgaatcttatatagaaggcagtagcgattct
cgaggatcggatcagatgtcgaagaaattggacgatctacagaaagagattaacaaatta
aagaaaattaatgctgccatatatcaatatggtgtcacacatatcttaaagaagattgtt
gatgattaa
DBGET
integrated database retrieval system