Atta colombica: 108686713
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Entry
108686713 CDS
T11098
Name
(RefSeq) poly(A) polymerase type 3
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
acoc Atta colombica
Pathway
acoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108686713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108686713
Enzymes [BR:
acoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
108686713
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
108686713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Polbeta
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
108686713
NCBI-ProteinID:
XP_018047638
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MWSAQSNNNSNPNSASNEKNNLRTLGMTSAISVAEPKPMDISRTNELKEALKPYNVFESE
EELNHRMEILSKLNALVKQWIRDTSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADID
ALCVVPRHIYRQDYFTSFFDLLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTL
KEIPDSMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHG
IYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNL
GYPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSVSTRTIMQEAFENGLAITEEIIMGK
ATWDKLFEPPNFFGKYKHYIVLLAKSLSAEDQLEWCGLVESKIRHLIGMLERNPHITLAH
VNPEAFPPLNPESGKHCSMWFIGLAFSKCEKNEKSEKGENINVDLTYDIKSFVDTVERQA
EQINMFKEGMWIEAKHVKRKDLHTYVSPSLLKKERKVSSNMHRNGNIAGNGNSGSVSPRS
QGDTSSRKRLSDQTLDACGKKRRINEAEEQAENTTLVVQSCGEDSNSGFSMDEYKPTLST
NKDEGPTSTTSVAQEGFVCT
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcagcacaaagtaataataattctaatccgaactctgcgtcaaatgaaaagaac
aatttacgtactctggggatgacatcagccatcagcgtagctgaacctaaacccatggac
atctctagaaccaatgaattgaaggaggccctgaaaccctataatgtttttgaatctgaa
gaagaattgaatcataggatggagattttaagtaaactgaacgcattggttaaacagtgg
ataagagatacgagtatagctagaaacatgccacctaatgtggccgaacaagtgggtggt
aaaatatacacattcggttcatataggttaggggtacatcacaaaggcgctgacattgac
gcattgtgtgttgtaccacgtcatatatatagacaagattattttacgtcctttttcgac
ttattgaaaatgcaagaagaagttacagatttaagggcagtagaagaagcctttgtacca
gttataaaaatgaattttgacggcatagaaatcgacatgctatttgcgaagttaactctt
aaggaaattccagattcaatggatctcagggatgatatgctactaaaaaatcttgatcag
aagtgtgtcagaagtcttaatggttgcagagtaacggatgaaatactacgtttagtacct
aatatagaaaatttcagattggctctgagagctataaaattatgggcaaaacgacatggc
atatatagtaatgtcttaggttatcttggtggtgtatcttgggcaatgctagtcgctcgg
acatgtcagctttatcctaatgccgtggctgcaactctaatagaaaaatttttccttgta
ttctctcaatggaaatggccacaaccagtacttttaaaacaacctgataatgtcaattta
ggttatccagtttgggatccaagagtaaatgtagcagacagatatcatctaatgccaata
attacaccagcatatcctcaacaaaattctaccttcaacgtgtctgtatcaaccagaacc
atcatgcaagaagcgtttgaaaacggactagctataacggaagaaattatcatgggtaaa
gcaacgtgggacaagttgttcgagccgccaaatttttttggcaaatacaaacattatatt
gtattgttagccaaaagtttaagcgcggaagatcaacttgaatggtgcggtcttgtcgag
tcaaaaatacgacatttaataggtatgttggaaaggaatcctcatattactttggcacac
gttaatccggaagcgttcccaccattaaatcccgaatcgggcaaacattgttctatgtgg
tttatcggcctggctttttctaagtgcgaaaagaacgagaaaagcgaaaagggcgagaat
atcaatgttgaccttacatacgatatcaaatcctttgtggatacagttgaaaggcaagca
gaacaaataaatatgttcaaggagggaatgtggattgaggctaaacatgtaaaaagaaag
gatttgcacacttatgtatctccaagtttactgaaaaaggaaaggaaggtttctagcaat
atgcatcgaaatggcaatattgctggaaatggaaacagtggtagtgtatcgccgcggagt
caaggcgatacaagtagcagaaagagattatcagatcagacgcttgatgcgtgtggaaaa
aagcgacgaatcaatgaggcagaagaacaagcggagaacacaacgttagtagttcaatct
tgcggagaagatagtaattctggcttcagtatggatgaatacaaaccgactctatcaact
aataaggacgaaggacctactagtacaacttcagtagcgcaggaaggattcgtatgcact
tga
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