Atta colombica: 108686812
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Entry
108686812 CDS
T11098
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
acoc Atta colombica
Pathway
acoc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108686812
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
PDZ_2
Yop-YscD_cpl
RA_3
Motif
Other DBs
NCBI-GeneID:
108686812
NCBI-ProteinID:
XP_018047774
LinkDB
All DBs
Position
Unknown
AA seq
2072 aa
AA seq
DB search
MATELVNKKAERDALRGVIQQWNANRLDLFELSEPNEDLEFHGVMRFYFQDSGQKVATKC
IRVASDATSQAVIETLIEKFRPDMRMLSVPEYALYEIHENGEERKLDLEEKPLLVQLNWH
MDDREGRFLLKRIDDKTNAQGVGFTSAEGSSFRRKLSKREKKQIKKQEKLSRLKSLEQDE
NAIPGDQNGVAEKLYTELPETSFTRSISNPEAVMRRRRQQKLERRLQQFRSKDGGPDTGG
TLKIYGEALCKDVPYKTLLLSVRDSAAQVVREMLSKYGLEKVDPQLYCLVQVNSENVSGN
VHQEYILDDDECPLAILMNHPSTRGSIMFHVRRRPADYMPRKRKKKPAGKWNELDHKYED
ERLPFLLELNPDSSDIPNGAGVRHRLQPNVTEVGSERPIGPQAVQAQTLTLPGPMVMPRH
CVIAFTENIVTLTPCSRDAHTYVNNQRIHQTTILQNGAIIKFGRMHTFRFIDPAPEERIR
QRHDSNKQIDYSYDRRSPDATNQDVSSEKFHPGSGTPNGGGQIPGQAQERATPSSPSKSA
VAAVRSPRSPTHPPEPTHNYETTFDLDGNVETASLSSSRDGNSRLSQYDRQPRGTDPILP
AVLEFLEETEETFLHAVITDIEPSAPQFKLAPTYTLYLSARYRASTHYRPELQPTERAHR
LTVMLANVATMIQRVIQERYMDASSLAFWLANGSELLHMLKSDRHVGAFSTRAQDILAEA
VHTAFGSLVRCITLELTPAMTQFMADADEPAKEAGVLQIFSNTMALLRRCRVNAALTIQL
FSHLFHAINATAFNTLVSNGNLCVRWFGRRLKARLNALETWAERQGLELASQCHLATIMQ
ATHLLQAPKYNAEELATLSSTCFKLNSLQVRALLQKYQPAADEPRLPAELIENVVRVAES
VADTLARADGREIRLEEEPVLGLALLLPEDGYSCEVIRGVPPGLAEFLAPLQRDGLCRMA
AQPTSSGYWTIYMIDHHNNLRSPSAMSNRSGGYISHLNQNQAQPEIHVIKLHKSTNGMGL
SIVAAKGAGQDRLGIYIKSVVAGGAADADGRLTAGDQLLKVDGQSLVGITQEKAAEYLVR
TGPIVTLEVAKQGAIYHGLATLLSQPSPVMSRGPRRMSERDLPSRLGHDATLQQIHSSKS
VPALHNMGTEAKQQHEVFNPGYSRASSSNSVTPPVQPPPMATINSATSLRSRSSHNLHEN
PMRIGTLSTGLVSRQQSSPNLNPSTSHMNTPSNVQGTEAERFYQNLSIYRNQDSTVKQQI
SPQQSEDRNPQHIQKGSLKGSQNSLNRPSTMEVGSHFRDRPTSAYITQSQQSYSAVSNQM
QQQTGGPPPRSQSSRDIIRQEAKMQEMQEEVRRRELRGGVPLLNQHKPPMYNISTRMAVP
PAQQVSNLRLPRPLGSTSNLGTTSNYMARQNAPSYNYLDAQYAQYNSTQYSQYNHPNRYP
VIVNQYGPMMIPKSKNEMIARDHQSIPNENLLGRDSSSQEAKSYAEQNRHFASSQNNPHY
PNGNLEHRVDQYENDNVNRAQNGDGHSTEVPPTRPALPPEDTFSNESPPPPPPSTSTHPL
YKQADMRYTASMQDPPRGSYYPVGGISAMQQPRQYQYSATNPWQREEREKEQARRREAAR
QWRDQQIAELSALTHRTQQQEEQLRALQLERDFQKRAEEIANQDDDEESNDLDNESVQRV
QGLLRMAASQDRAVQGVLQPSTLSRTITGNQSMRGGLPLLSNQSVTSSHVHILPNQTAPQ
NVEMSSPGQENNDLHVQSNQQQQQTASQNEEHISSANYGTHSHFSSGQKSYSMGMSHSVE
DRELQWKIDEVKRKQVGYEENQKKQEEQQQQTYQSNQHPRSQLHPGMLRLDNLIINGPNI
STSSQNNVNDAPPPPERGSSYAIMSQQSALRSNGSTTSNLPHTSQQSASIKRVSFHDSNT
NNESMLRNVSSGMSNPPSISMDTIREDPNNFINDAENLLASPKTPEGSGTSFTGATPGVI
GAQEVYKDPRQKRLAEKQKQQQNSQIGAVPEKLSFKEKMKMFAMETGEDGTPRDKVKISR
AQREIDNISSPLNSNNNNNNTTSGNNTNNNRT
NT seq
6219 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggaattggtgaataaaaaggcggagcgggacgctctcaggggagttatacag
caatggaatgccaatcgcttggacctgtttgaactttcggagcccaacgaagacttggag
tttcacggcgtgatgaggttttatttccaagacagcggtcaaaaagtcgctactaaatgc
atcagggttgcctcggacgcgactagccaggcagtgatagaaacgcttatagaaaaattt
cgtcccgacatgagaatgctgtccgtcccagaatatgctctttacgagattcatgagaat
ggagaggagcgtaagcttgatttagaagaaaaaccactactagttcaactaaattggcat
atggacgatcgggagggacgcttcttgctgaagaggatcgacgataaaaccaatgcgcaa
ggcgtcggttttacttcagccgagggttctagcttccgaagaaaattgagcaagcgggag
aaaaaacagattaagaagcaagagaagctcagtcgattaaagagtttagagcaggatgag
aatgcgattcctggtgatcagaacggtgtcgctgagaagctttacacggaattgcctgaa
accagttttacgagaagcatctcgaatccagaagcggtgatgagacgacgtcgtcaacag
aagcttgaaagaagactccaacaatttcgtagtaaggacggtggtcctgacacaggcggc
acattgaaaatttatggtgaggcgttgtgcaaagacgtgccatacaaaacgctgctattg
agtgtgcgagattccgccgctcaggttgtacgagaaatgctttctaaatatggtctggaa
aaagtggacccacagttatattgccttgtgcaggttaatagtgagaacgtgagtggcaat
gtgcatcaggaatatatattggacgacgatgagtgtcctttggcgatattaatgaatcat
ccttccacacgaggttccattatgtttcacgtgagaaggaggcccgcagattacatgccg
cggaaacgtaaaaagaaaccagccggaaagtggaatgagctggatcataagtatgaggat
gagaggctaccatttttgctggagcttaatcctgacagcagcgatatcccgaatggcgcc
ggagtgcgacatcgattacaaccgaatgtcacggaggtaggatcagagagaccgatagga
ccacaagcggtgcaagcgcaaacactgacgctgccgggaccgatggtgatgcccaggcat
tgcgttatagcttttaccgagaacattgtgactctcacgccatgttccagagatgcacat
acgtatgttaacaatcagaggatacatcagacgaccattctacagaatggagctatcatc
aaatttggcagaatgcacacttttcgattcattgatccggcgccggaagagcgcattagg
cagagacacgattccaacaaacagatcgactactcttacgaccgacgctcgccggacgcg
accaatcaggatgtcagctcagagaagtttcatccggggtctggaacaccgaacggcggt
ggtcagatcccgggtcaagctcaagagcgagcaaccccgtcaagtccctcgaagtctgct
gttgcagcagttcgtagtcctcgtagtcccacacatccgccggagcccacacacaattat
gagaccacattcgacctggatggaaacgtggagaccgctagtctaagcagcagcagggat
ggcaacagcaggctctcacaatacgatcgacaaccgcgaggcaccgatccaattctgcca
gctgtcttagaatttctcgaggaaacagaggagacatttcttcacgctgtcatcaccgat
atagaaccctcggcaccacagttcaagttggcgccaacatacaccctctatctcagcgcc
agatatcgcgccagtactcattacagaccagaattgcagcctacggaaagagcgcaccga
cttactgtcatgttggcgaatgttgctactatgatacaacgcgttattcaggaacgttac
atggatgcttcgtcattggccttttggctagcgaatggctcggagctattacatatgttg
aagagtgaccggcatgtgggtgcattttccacgcgagcgcaagatatcttggcagaagcg
gtacatacagctttcggctcgttggtgcgatgcatcacattagaacttacaccagcaatg
acacagttcatggcggacgcagatgaaccagcgaaggaggctggagtgctgcagattttt
tcaaacacgatggccttattacgacgatgccgtgtgaatgccgcattgacgatacaatta
tttagtcatctgtttcacgcgatcaatgccacagctttcaatactcttgtctcaaatgga
aatctgtgtgtcagatggttcggacgcagactcaaagcgagactgaacgcattagagacc
tgggccgaaaggcaaggcctggaacttgccagtcaatgccatttggcgacgatcatgcag
gcgactcatctattacaagctccgaaatataatgctgaagagctggctacgctaagctcg
acttgctttaaattaaattctctacaagtgagagcattactacaaaaatatcaaccggcc
gcggacgagcctaggctacctgccgaattgatcgaaaacgtagtgagagtagcagagagt
gtcgcagatacacttgcgcgtgcagatggccgtgaaataagactagaagaggaacctgtc
ctagggttagcattgttacttcccgaggatggctacagttgcgaggtaataagaggtgtt
ccaccaggattagcggaatttctggcacctctgcaacgagacggattatgtcgaatggca
gcccaacctactagtagtggttattggaccatttacatgatagatcatcacaacaatttg
cgtagtcctagcgcaatgagtaatagatctggtggctatatcagtcacttaaatcaaaac
caagctcaacctgagatacatgttattaaattacacaagagtaccaacggtatgggctta
agcatcgttgcagcaaagggtgcaggacaggatcgattaggtatctacatcaaaagtgtt
gttgctggtggtgccgcagatgctgacggtagattgacggcaggtgatcaactactcaag
gtagatggacaaagtctggtcggaataacacaggaaaaagctgctgagtatcttgtacgt
accggtccgatcgtgacattggaagttgcgaaacagggcgctatatatcacggacttgca
acgttattatctcaaccttctccggtgatgtcaagaggtcctcgtcgcatgagcgagcgg
gatttaccgtcgcggcttggacacgatgccactcttcagcaaatccatagcagcaagtct
gtaccggcattgcataatatgggtaccgaggctaagcaacagcatgaagtgttcaatccc
ggatacagcagagcttcttccagcaacagcgttacaccgcctgttcaaccacctcctatg
gcaacgattaacagtgcaacttctttacgttccagatcgagtcataacttgcatgagaat
cccatgagaatcggaactttatccactggcttggtcagcaggcagcaatcgtcacctaat
ttaaatccaagtacgtcgcacatgaatacaccgtcgaatgtacaaggcacagaagcagag
cgattttatcagaatttgagtatttatcgaaaccaagactcgacggtgaagcaacaaatc
agtccacaacagtcagaagatagaaatcctcagcacatccaaaagggttcattaaagggt
tcacagaactcattgaatcgtccctctactatggaagttggcagccatttccgagaccgt
ccgacatccgcttacattactcaaagccaacagagctactcggcggtcagcaatcaaatg
cagcaacaaactggtggtccaccaccacgttctcagtcttcgcgcgacattatccgccag
gaggcgaaaatgcaggagatgcaggaggaagttcgtcgacgagaattgcgtggcggcgta
ccgctacttaatcaacataaaccaccaatgtacaatatcagtactcgaatggcggttcct
cctgctcagcaagtgtcgaacttgcgtttaccaaggccactcggttccacgtcgaatcta
ggaacgacctccaattacatggcgagacaaaacgcgcctagttataattacctagatgcc
caatatgctcaatataacagcacgcagtatagtcaatacaatcatcctaaccgatatccg
gtaatcgtaaatcaatacggaccgatgatgatacccaaatcgaaaaacgagatgatcgcg
cgcgaccatcagtcgattcctaatgaaaatctactcggtagagactcgagcagtcaagaa
gcaaagtcatacgccgaacagaaccgacatttcgcgagttcacagaataatccacattat
ccgaatggtaatctagaacaccgcgtcgatcaatatgagaatgacaacgtcaatcgtgcg
caaaatggagatggccactctacagaagtgccgccaacgagaccggctttgccacctgag
gatacatttagtaatgaaagtccaccaccaccgccgcccagcacttcgacgcatcctcta
tataagcaagccgatatgagatataccgcaagcatgcaggatccaccacgaggtagttat
taccctgtgggaggaatcagtgccatgcagcaaccgcgtcaatatcaatatagcgcgacg
aatccttggcaacgcgaagaaagagagaaggaacaagctcgtagaagagaagccgctcgt
caatggcgagatcagcagattgctgaactaagcgcgctgacacatcgaactcagcagcag
gaggagcaactgcgagctcttcaactggaaagagattttcagaagcgtgcggaagagatt
gccaatcaagacgatgatgaggagagcaatgatttagacaacgagagtgtgcaacgcgtt
cagggcttgctaagaatggcagccagtcaagacagagcagtccaaggagttctgcagcca
tcgactttatcgagaacaattacaggcaatcagtctatgagaggtggtttacctctcctg
agcaaccaatctgtcaccagcagtcacgttcacattctgcccaatcaaacagcacctcaa
aatgtcgaaatgagcagtcctggtcaagaaaataatgatttgcatgtacaatcaaatcag
cagcaacaacaaacggcgagtcagaatgaagagcatatatcgtcagctaattatggcaca
cacagccatttcagttctggtcagaagtcttattccatgggtatgtcgcactctgtagaa
gatagggaattgcaatggaaaatagatgaagtgaagcggaaacaggttggatatgaggag
aaccagaaaaaacaagaagaacagcagcagcaaacatatcaatcgaatcaacatccgcgg
agccagctacaccctggcatgttgcgcttagacaatttgattattaatggtcctaacata
tctacatcttcgcaaaacaatgtaaacgatgcacccccaccaccagaacgaggttctagt
tacgccattatgtcacagcagagtgctctcagatcaaacggctcgaccacatctaatcta
cctcacacttctcaacagtcagcatctataaaaagagtttcttttcatgattcgaataca
aacaatgagtccatgctgcgcaatgtatcatctggaatgtcaaatccgccgtcaatctca
atggataccattagagaagatcccaacaattttatcaacgatgcagagaatttattagcc
tctcccaagacaccggaaggatccgggacttcatttactggcgccactcctggtgtaata
ggagctcaagaagtctataaggacccgagacaaaagcgactggcggaaaagcagaaacag
cagcaaaactcgcagattggtgcggtaccggaaaaactcagctttaaagagaaaatgaaa
atgttcgcgatggaaactggcgaggatggcacaccgcgagataaagtaaagatctcgcgc
gctcagcgtgagatcgacaacatcagtagcccacttaattccaacaataataataataac
accaccagcggcaataacactaataacaataggacctaa
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integrated database retrieval system