Atta colombica: 108686843
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Entry
108686843 CDS
T11098
Name
(RefSeq) aladin-like
KO
K14320
aladin
Organism
acoc Atta colombica
Pathway
acoc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108686843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108686843
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108686843
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_Aladin
Beta-prop_THOC3
WD40
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_IFT140_1st
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Ge1_WD40
WDR55
WDCP
Motif
Other DBs
NCBI-GeneID:
108686843
NCBI-ProteinID:
XP_018047822
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MLKILSLHDFESPAFGDVAAVGLIEGVVHYCTYDALQDEMQPFAKYLRDYPEVSITQEIL
ATRETARTINADELFLPVHDSIFKKIANVWRERGLSEAIRFAAAADPEQITNVVHWIATR
LNSILDLMDRGIYHRDVLPTSGNGSVADIVATRDWHTSLVRCLSWHPHCARLAVAMRDDR
IRIFSQGLLGVPVLRHSRQKSVCCLSWRPHAGRELAVACYSGVLIWTIELGAASNLLSHA
VLLNQRNHAPVTSVAWHPQGDLLASCSPTDLNIIIWNVSKEEGIPLKRIGGGGICFSCWS
TCGLRLFSASCRKIFRVWNTGVSTTWHAERWTVPQGRVATACFGPNLTLLFAITEDPSTI
FSLPLQNNIFDVKKANNNDIKIATRLIDLTKVNFSSENNDDYVTVGGRIVSMEWDLTGKY
LAILFQDSPVIALVKTSLSHLSRIVEAQASCLIKGFTGEVPNCINFFQKSSSWICLTIAW
SSGRVQHFPIVESESKVDPHTHSTLLSQSMRPSKLYSFDCYRQY
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagatattgtcgcttcacgatttcgaaagtcctgcttttggcgatgtggccgcc
gtcggcttgattgagggcgtcgtccattattgtacctatgatgcgctacaggacgagatg
caacccttcgccaagtacctgcgtgactaccctgaggtttccatcacacaggagatcctt
gcgacccgtgagactgcacgtacaatcaacgctgatgaattgtttcttcccgttcatgat
agcatctttaaaaagattgccaatgtatggagagaaagaggattgtctgaggctattcgc
tttgccgctgctgcagatccagaacagatcacaaatgttgtacattggattgcaacaaga
ctaaattcgatattggatttaatggacagaggaatatatcacagagatgtgttaccaaca
tcgggaaatggatctgttgctgacattgttgctacccgagattggcatacatcgctggta
cgatgtttatcctggcatccacactgcgctcgcctggctgtggctatgagagatgataga
attcgtattttttcgcaaggtctattaggggtgccagtattgagacatagtaggcaaaag
tcagtctgctgtttaagttggagacctcatgccggtcgcgaattagcagtggcttgttac
tccggagtattaatttggacaatagagttgggagcagctagtaatttacttagtcatgca
gtacttttaaatcaaagaaatcatgctcccgtcacaagtgtcgcatggcatccacaaggt
gacttgttggcatcttgctcaccaacggatttaaatataataatctggaatgtttctaaa
gaggaaggaattccgctaaaacgtattggtggaggtggtatatgtttttcatgttggtcg
acttgtggcttgcgattattctctgcttcatgcagaaagatcttcagagtttggaatact
ggcgtttcgacgacatggcatgcagaaagatggactgtaccccagggtcgtgtagcaact
gcatgttttggtcccaatttaacgttactctttgctattactgaagatccttctacgata
ttttcattgccactgcagaataatatatttgatgttaaaaaggcaaataataacgatata
aaaatagctacgcgcctaattgatttaacaaaagtgaatttctcatcagagaataatgat
gattatgtcacggtgggaggtagaattgtttctatggaatgggatctgacaggaaaatat
cttgctattctttttcaggacagtccagttattgctctggtcaaaacaagcttaagtcat
ttatcgcgaatagtggaagcgcaggcaagctgccttattaaaggatttactggagaagtg
ccaaactgcatcaatttctttcaaaaatcttcgtcatggatttgtttaacaatagcttgg
agcagtggacgagtgcagcatttcccgattgtggaaagtgaatccaaggttgatcctcac
acacattccacgttattgtcacaatccatgagaccaagtaaattgtacagctttgattgt
tatagacaatattaa
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