Atta colombica: 108687121
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Entry
108687121 CDS
T11098
Name
(RefSeq) protein CASC3-like isoform X1
KO
K14323
protein CASC3
Organism
acoc Atta colombica
Pathway
acoc03013
Nucleocytoplasmic transport
acoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108687121
03015 mRNA surveillance pathway
108687121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108687121
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108687121
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
108687121
NCBI-ProteinID:
XP_018048222
UniProt:
A0A195BFA6
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Position
Unknown
AA seq
798 aa
AA seq
DB search
MSDTRRRRKSNQSCGSDDLSDSYEELNATKETQSSEQTDGHQDSECDIYESDSDAESQEG
GEQRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTTDEVTENNTEQQTNAK
ETKEKKVWKDKEDRWDHDRYNDEEQAPKRSEELIATYGYDIRNEEGPPRARRRRRYGRGP
NKYTRNWEDEDAYGKTTTSRGNNRRFHKNNEDFPALGNSKNTPNKVEEPVISSAWYSSKN
KTQNKTQNFPPLQSQQDNAKTKPAIASNTSTSENKTSDESTNTSWKKDSRHITQNQNTNG
NTGSGDAEKLTNTKPLSRENNKRNTQESVSLVASRTRGRGFKSNANNNMVTNRIVENKAK
GRGPGPVTIENRRNNTAQHNEEHQLAHDMKQLNINDGSQYHQPARHNKGFFTSTNQHRSN
TVPPRMQQQQQQQQQQQSHQQQTHSSQQTLQQQQQQQDSSGNRPKRYSSLRQRPTITETS
AQQNYPSQHAQHGYFPPQAGNSRAVLESQGYPQSHFEQSSPVAPATAPMAGQPVISLPPG
GQAASYAPPPFLVPPPQFIPPQTAPPSIINYVPGPNGPTFPPNFQGYQGYNPSVQPQGPP
PPQELFQPQGCTYYSPAQQQQQQQQAAPLRRPKAAIPILPPPDNQQSGRGRGRSTQYQNN
QSSSNTQQQTEQEAKSGNMVESDEKPVPGQFDSAQTEQPSTLNQESQKDQDMEIRTVNNI
DQEVEMITNADSHINIDTSPIKKDNLDDSVSVKELLEATSNEKNTVSHSPTTLASVETEL
GNIESAIPESTIVEKAAA
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatacacggcgacgtcgtaaatccaatcagtcatgcggttccgacgatctctcg
gattcgtacgaggagctaaacgctacgaaagaaactcaaagtagtgaacaaaccgatgga
catcaagattcagaatgtgacatttatgaaagcgactcagacgccgaatcacaagaaggc
ggggaacaacgtgaaagtggagatggacaagaagaggaaaaaccacagaagaagttggac
gatgacgaggacagacgtaacccgcagtatataccaaaacgaggaacgttttatgagcat
gatgatcgtacaactgatgaagtaactgagaataacacagaacagcagacgaatgcaaaa
gaaaccaaagaaaagaaggtgtggaaagataaggaagacagatgggaccacgatcgatac
aatgacgaagagcaagctccaaaaagatctgaggaattgatagcaacatatggttatgat
attagaaatgaagaagggccacctagagctagaaggagaagaagatatggtcgtggacct
aacaagtacacaaggaattgggaggacgaagacgcttatggaaagactacaactagtaga
ggaaataacagacgcttccataaaaataacgaagattttcccgctcttggtaatagtaag
aatactccaaacaaagtagaggaacctgtaatttcgtcagcttggtatagcagcaagaat
aaaacacagaataaaactcaaaacttcccaccgcttcaatcccaacaggataatgcaaaa
actaagcctgctattgcttccaatacatccacaagtgaaaataagacgtcagatgaatcc
actaatacatcctggaaaaaggatagtagacacattactcaaaatcaaaatacaaatgga
aatactggttctggcgatgcagaaaaattgactaataccaagccattatcaagggagaat
aacaagaggaacactcaggagtctgtaagcttggtcgcaagtaggacacgtggaagaggt
ttcaaatccaatgctaataacaacatggtcactaacagaatagttgagaataaagcgaaa
gggcgcggcccgggtccggttacaatagagaatcgaaggaataataccgcgcagcacaat
gaagagcaccaacttgctcatgatatgaaacaacttaatattaatgatggtagtcagtat
catcaacctgcacgacacaacaaaggttttttcacatccaccaatcaacacagatcaaac
acagtaccccctagaatgcaacaacaacaacaacagcaacaacaacagcaatcacatcaa
caacaaacgcattcgtcacagcaaacattacagcaacaacaacaacagcaggatagttct
ggaaatagacctaaacgatattccagtcttcgtcaacgacctactattacggaaacttcc
gcacaacagaattatccatctcaacatgcccaacatggatattttccacctcaagctgga
aattcaagagccgttctagaatctcaaggttatcctcaaagtcattttgagcagtcttct
ccggttgctccagccactgcacccatggcagggcaacctgttatttctctgccacctggt
ggacaagctgctagttatgcgccaccaccattcttagtaccaccaccgcaattcatacca
cctcaaacagcaccacctagtataattaattacgttcctggtccaaatggcccgacattt
ccaccaaactttcaaggctatcagggatataatccttcagtacagcctcagggtccaccg
ccgcctcaagaattgtttcaaccgcaaggatgtacttattatagtcctgcgcaacagcaa
cagcaacagcagcaagcagctcctttgcggcgaccgaaagcagcgatacctattcttcca
ccacctgataatcagcagagcggtcgaggaagaggtagaagcactcagtatcagaataat
caatctagcagtaacacgcaacaacagactgaacaagaagccaagagtggtaacatggtg
gaaagtgacgaaaaacctgtgccgggacaattcgacagtgctcaaaccgagcagccgagc
acattgaatcaggaatcccagaaagatcaagatatggaaatcagaacagtgaacaatatc
gaccaagaggtagagatgattactaatgctgactctcatataaatattgacacatcaccc
attaaaaaagataacttggacgatagcgtcagtgttaaggaactattagaagcgacttct
aatgaaaagaatacggtttcgcacagtccaacgacattggctagcgtcgagactgaatta
ggtaacattgaatccgcgattcccgaaagtaccattgttgagaaagctgcagcctaa
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