Atta colombica: 108687263
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Entry
108687263 CDS
T11098
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
acoc Atta colombica
Pathway
acoc03013
Nucleocytoplasmic transport
acoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108687263
03015 mRNA surveillance pathway
108687263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108687263
03041 Spliceosome [BR:
acoc03041
]
108687263
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108687263
Spliceosome [BR:
acoc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
108687263
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
108687263
NCBI-ProteinID:
XP_018048440
LinkDB
All DBs
Position
Unknown
AA seq
926 aa
AA seq
DB search
MDDANDKVVQVKEEAEIKKEDTNITGRIFVKQFHQLLEDPLLKSTSDDVQRAIKGLREIP
DEELNEFLDDEDFMKGLDVVDAWERDEDKNREIEQNRTESTKQGKNQISREHHRPEKDKR
KKPKKEEKKREETRRDPLKSTKDIERDKMRTKRDTENKLLAEKEKAIKYLLDSDNVVPPG
TETEAIQSIAEEQQNRERAQREAQRSREHRRSKSLERYERASPSRRRTPDRSRLSPHRRK
SPFVSPDRRRSPFKKSVERHRSPYRYSPSRLKNSPRSYDRRSPKLSPDSRRRSPRRLSGE
RRSSIERRRSAERRRRRADWMHERRRSRSRDRRSRSMERSRRRLSRSPMSRRYSPRRRSR
TRSRSLEKRPRKRSPFINELARQLGHEAMSTAVNTSGYVPSATMEGIAPLLNPSTYQQEA
DRTLPPTQPPQPQPSLPPPSSSAMLPPMSSGPSFMNFEPMPTAPLMNFEPMPPPSMTPTI
APTMTPTSYASGPVMYNQPNAAAPPVMCSPLLPVPSPQPVPPPVMDRAHASYNPSYTAPF
VQQSSIHQFEKKSVNHSTTSSTSSQKQNYAEHGSATSYKEVYSPPQQERMKTPEPPIISK
PKQKTSLSSLLEASVSAKDSSNIPVLYPGFKPEIMRHCEQAIYQLPVEDPRLKMKGRFFY
DRSEENNTKDVSDDHTSNSILLQKSKTKIFWKETNAEQPISVPRTTQTHQKICQTDEVET
ETKGVQVCITTIDFASQVYADDLQQIKEERRPIMDRLDWSARDTYEYGSKFREVEDLRWS
LSNSSQRRTWNRQSSPSRRSDEQEHHLDPMNHESRSSRLDSPIRSNEFSAQSNIRDHYSH
DRYSPNYQRRSIERDEFHDRRSNHSRGESPMELEESDNELMTGHTFQRGSDWHGRGKVSR
GKSHNLRGKHVGGRLYRSHGNYRGKF
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgcaaatgataaagttgttcaagtgaaagaagaagcagaaataaaaaaagaa
gatacaaatattactggcaggatatttgtgaagcaattccaccaattactggaggatcct
ttgttgaagagtactagtgatgatgtgcaacgtgcgatcaagggtcttcgagaaataccg
gatgaagaactgaatgagttcctcgatgatgaagactttatgaaaggattggatgtcgtg
gatgcatgggaaagagatgaagataaaaaccgcgagattgagcaaaacaggacagaatct
acaaagcagggaaagaaccaaatctctagggaacatcatcgtcccgagaaggacaaacgc
aaaaagccgaagaaagaagagaaaaaacgtgaggagactcggcgggatcctttgaagagc
actaaggacatcgaaagggacaagatgcgaacgaagagagacaccgagaacaagcttctt
gctgaaaaggagaaagcgatcaaatacttgttggattcggacaatgtagtcccacctggc
acggaaactgaagccatccagagcatcgctgaggaacaacagaatagagaacgagctcag
cgtgaagcccaacgaagcagagagcatcgtagaagcaaatcgttagaacgttatgaaaga
gcgagtccatctcggcggagaactcctgatcgatctcggttgagtcctcatcgacgaaaa
agtccctttgtaagcccggatcgtcgtaggagcccttttaaaaaaagcgtagaaagacat
agaagtccttacagatacagtccaagtagattgaaaaattcaccgcgctcctacgaccgg
agaagccccaaattaagtcctgattctcgacgaagaagtcctagacgacttagtggagaa
cgacgatccagtatagaaagaagacggagtgctgagcgacgtaggagacgcgctgattgg
atgcatgaacgccgaagaagccgatctcgcgatcggaggagtcgcagtatggaacgttcg
agaagacgattaagccgttcaccaatgagcagacgatacagtcctcgtcgtcgaagtcgc
acacgtagcagatcattggagaagcgtcccaggaagcgttcacccttcatcaatgaacta
gcaagacaactaggacatgaagcaatgtcgactgctgtgaacaccagtggatacgtaccg
tccgcgacgatggaaggaattgcaccgttactcaatccgtccacatatcagcaagaagcg
gataggacattgccgccaacgcagccgccacaaccacaaccatcactgccaccaccatca
tcatcagctatgttaccacctatgtcaagtggaccgtcatttatgaactttgaacctatg
ccgactgcaccgttaatgaatttcgaacctatgcctcctccatctatgaccccaaccatt
gccccaaccatgactccaaccagttatgcatccggtccggttatgtacaatcagccgaat
gctgctgcgccaccggtgatgtgttcaccgttgcttcctgtaccctcgccgcaacctgta
cctcctcctgtgatggatcgtgcgcatgcatcgtataatccatcgtatactgcacccttt
gtccaacaatcatcgatccatcaatttgaaaagaaatctgtaaatcattcaaccacatcc
tccacgtcatcacagaagcagaattatgcagaacatggatcagcaacatcgtacaaggaa
gtttactctccaccccagcaggaacgaatgaagacacctgaaccaccgatcatctccaaa
ccaaaacaaaaaaccagcttatccagtctattggaagcatctgtttcagccaaagattca
tctaatataccagtactatatccaggattcaagcctgaaataatgcgacattgcgaacaa
gcgatatatcagcttcccgtggaggatccgcgtttaaagatgaagggtagatttttctat
gatcgcagcgaagaaaacaatacgaaagatgtttccgacgaccatacatcgaattcgata
cttttgcagaaaagtaaaactaaaatattttggaaagagactaatgcggaacagccgata
tcggttccgagaacaactcaaacgcatcagaaaatctgtcagacagatgaggtggaaacg
gaaactaaaggcgtgcaagtatgcattaccaccatcgactttgcatcgcaggtttatgcg
gacgacctccagcaaataaaagaagagagacggccgataatggatcgtttagattggagc
gcacgagatacttacgaatatggatctaaatttcgcgaagtagaggatctaagatggagt
ctaagtaactcttcgcagagacgtacttggaacaggcaatcgtctccttctagaagatcc
gacgaacaggagcatcatttagatcctatgaatcatgaatctagaagctcgaggctggat
tctcctattagaagcaatgagttttctgctcaatctaatatacgtgatcactatagtcat
gacagatattcgcctaattatcaaagacgttctatcgaacgtgatgaatttcatgataga
agaagcaatcatagccgtggagaaagtccgatggaactagaagaatctgataatgaatta
atgactggccatacattccaaagaggatctgattggcatggaagagggaaagtctcaagg
ggtaaaagtcataatttgcgaggaaaacatgtaggaggaagattatatcgaagtcacggg
aactatcggggcaagttttaa
DBGET
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