Atta colombica: 108687528
Help
Entry
108687528 CDS
T11098
Name
(RefSeq) rap guanine nucleotide exchange factor 2-like isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
acoc Atta colombica
Pathway
acoc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108687528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
PDZ
RA
PDZ_6
RA_2
cNMP_binding
PDZ_2
MLIP
Motif
Other DBs
NCBI-GeneID:
108687528
NCBI-ProteinID:
XP_018048810
LinkDB
All DBs
Position
Unknown
AA seq
1495 aa
AA seq
DB search
MHKHTSQLRGPGGHNGGYHSANRGPVRRWNSFHGGGGGGGGGGGGGGGGMGNFNDGVGNG
GIVTKACQEPFRAVPKAVQALRSESVDRTHRVQPPPPPAFPRRRFSVCFGKRTGGSARRP
NECFVLEPSEMIVIDYPEVHGGGRMHRPPHPHPITDHRQVNLVFDDTFSQGLTGRPELYQ
KSNRSSHSSDTSSAYSGSDTMTSVQSSLDADPDEVDLSGLVESIVDSDEEEDLAESMDSL
TVRDPVRECLEKDPVERTEDDIETLLEFTQQLKAFTNMTLAVRRALCAVMVFAVVDRAGM
VVLNDGEELDSWSVLINGAVEIEHSNGEIEQLGLGDSFGILPTMERLLHRGVMRTKCDDC
QFVCVTQADYFRIQHQGEENTRRHEENGRVILVTELRGALDGAARRGHVVIRGTPERLML
QLIEENSITDPTYVEDFLLTHRTFIDSPLLVASQLLEWFDQAQVRDRVARVVLLWVNNHF
TDFETDPAMMEFLEAFETGLEREKMLGQQRLLNIACAAKARTRNVTLARPNRDEVLNFSI
LGGFERGFGIFISKVDKRSKAEDVGLKRGDQILEVNGQSFEHVNHAKALDILRASTHLSI
TVKSNLLAFKEMLQMPDNSPRPRGRTSKPEIPRLQSDPRARLSTHVDPMTPVNPLNPMIG
GVPLLIPDNNVSPCKDSKKEHKGFMTLGPKRRLQKALMKMNILPKNTINDGVHLDDPLAP
PHTPPGTGLTQTTTNLYHSKSNPDLTSLYCYDDLRANDYPEHVLKVYKADQTCKYLLIHK
ETTAHEVVMLALQEFGITESSSNFSLAEVSVGEGGMIKQRRLPDQLQNLAERIGLSSRYY
LKTNGISETLVADDQAPELIRESQVHFLQLNAVEVAIQLTLQDFSIFRQIESTEYVDDLF
ELKSRYGVPMLSQFAELVNREMFWVVTEVCSEHNLVRRSKIIKQFIKIARQCKECKNFNS
MFAIVSGLGHGSVSRLRASWEKLPTKYQRLFSDLQELMDPSRNMSKYRQLVASEQTQPPI
IPFYPVVKKDLTFIHLGNDSRVEGLVNFEKLRMIAKEVRTLTNMCSSPYDLLTMLERGGQ
PPSSAMVALNQMTTGNQGGQTATVKRRKKSTAAPNPKKMFEEAQMVRRVKAYLANMKVIT
DEERLHQLSVDCEPHAGAVAVAAAVPLSGSRGRRHPSPTLSTTSSASSTSEGRKSIQGTK
FGAASPQAVRKMLALSDPHKTRPYQPKHCAPPLPVPGLALHSSGLEPSPGAPRRVGSGSR
VPMHERSHSDTPASLPPPVDLSAESSSVTSLSNLQPLRKTLTSGSVTSSDSGHSTQLDSH
SGSSVEAGGSPPPPQRRHSALQGSVIRGGAPPFPHAVAVLPPLPANQNHNHNHHHHHHHQ
HYHDHLLHHHHQPPTPQGTTGLGVNMGLGMPAPLPPPGAGTTTIMTTMSAMAGNMTSSIR
SGMTNTPQCRQPPAYKVAQQMARLHRLGRANSHEGVTYRGTDHEDDDEDAQVSAV
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atgcacaagcataccagtcagcttcgcggtccaggtggccataatggcggctatcacagc
gctaacaggggcccagtgaggagatggaacagcttccatggtggaggtggcggtggcggt
ggcggtggcggtggcggtggcggtggcatgggtaatttcaacgatggcgttggaaacggc
ggcatagtcacgaaggcctgtcaggagcccttcagggctgtgcctaaggcagtgcaagcc
ctcaggagtgagtccgtcgacaggacccatcgagttcagccaccgccaccacccgcattt
cccagaagaagattttccgtgtgcttcgggaagcggacgggtggcagcgccaggcgaccc
aacgaatgcttcgtcctcgagccctccgagatgattgtcatcgactatccggaagtccat
ggtggagggaggatgcatcgaccaccgcatccccatcccataaccgaccaccgtcaagtc
aatctggtcttcgatgatacgttctcacagggccttacaggcaggccggagttatatcag
aaatcaaacaggagcagtcattcgagtgacacaagttcagcatacagtggatccgacact
atgacatccgtacaaagttcgttagatgcagatcctgatgaagtggatttgtcgggtctt
gtggagtccattgttgatagcgatgaagaggaagatctggcagaaagcatggatagttta
acggtacgtgatcctgtacgagaatgtttagagaaggatcctgttgagagaacagaagac
gatatagagacgcttttagaatttacgcaacaattgaaagctttcacaaatatgactttg
gctgtcagaagagcgctgtgtgctgtgatggtgttcgcggtagtcgatcgtgctggaatg
gtagtcctgaatgacggcgaggaacttgacagttggagcgtgttaatcaacggtgctgtt
gagattgagcatagcaatggtgagattgaacaactcggtctcggtgatagctttggtatc
ttgcctactatggagaggctgttacatcgtggagttatgagaacaaagtgtgacgattgc
caatttgtttgtgtcacgcaagcagattattttcgaatacaacatcaaggtgaagagaat
accaggagacacgaagagaatggaagggtaattttagtgactgaattgcggggagctttg
gatggtgcagcgcgaagaggtcatgtggtgattcgaggaacgccagagcgtttgatgtta
cagctcattgaagaaaacagtattacagatcctacttatgtggaagattttttattaact
catcgaacgtttatcgatagtccgttgttagtcgcaagtcaattgttggagtggtttgat
caagcgcaagtgcgagatcgcgttgctcgcgtcgtgctcttatgggtgaacaatcatttt
accgatttcgaaactgatccagcgatgatggaatttttagaagcatttgaaactggactg
gaaagagagaaaatgttaggacagcaaaggttattaaatattgcatgtgcggcgaaagcg
agaacgcggaatgtaacgttagccaggccaaacagggacgaggtcctaaattttagcatt
ttaggaggatttgagagaggttttggtatatttatctcaaaagttgacaagagatccaag
gctgaagatgtcggtttaaagaggggtgaccagatcttagaagtaaacggccaaagtttc
gagcatgtaaatcatgcgaaagctcttgatattttgagagcttctacgcatctcagtata
actgtaaaatctaatttacttgctttcaaagaaatgcttcaaatgccagataattctccg
agacctcgaggtagaacaagtaagccggaaataccgaggcttcaatcagatccacgagct
agattatcaacacatgtggatcccatgactcctgtaaatcctttaaatcctatgattggt
ggagtaccattattaataccggacaacaatgtgtcaccgtgtaaagactctaaaaaggag
cataagggatttatgactcttggacctaaacggcgattacagaaagcacttatgaaaatg
aacatactgccaaagaatacgatcaacgacggtgtacatttggatgatcctcttgctcca
ccgcacacaccaccgggaacagggcttacgcaaactactactaatctatatcattcgaaa
agtaatccagatcttacgtcgctttattgttacgacgacttaagggcaaacgattatcct
gaacatgtgctcaaggtatataaagctgatcaaacctgcaaatatcttcttattcacaaa
gaaacaacggcgcatgaggtagtaatgcttgcacttcaagaatttggcataacagaaagt
agttcaaatttctctctggcggaagtaagcgtcggcgaaggtggcatgattaaacagcgt
agattaccagatcaattacagaatcttgctgaacggatcggattaagctctcgatactac
ttgaaaactaacggaatttccgaaactttagtagctgacgatcaagctccggaactcatt
cgagagtctcaagtacactttctgcaattgaatgccgtggaagtagcaatacaattgact
ctgcaagacttcagtatattcaggcaaatcgagtccacggagtatgtggatgacctgttt
gaattgaagagtaggtatggtgttcctatgctcagtcagtttgcagaactagtcaacaga
gaaatgttctgggttgtaacggaagtttgttcggaacataatctcgtacggcgcagtaaa
attataaagcaatttattaaaattgcgcgtcaatgcaaggaatgcaagaatttcaattcc
atgttcgcgattgtatccggtttgggtcatggctcagtgtcgagattaagagcttcatgg
gaaaaattgccaaccaaatatcaaagattatttagtgatttacaagaattaatggatccc
agccgtaatatgagtaaatatcgacaattggtggcgtctgaacaaacgcaaccacccata
atacctttctatccagttgtgaaaaaggatttgacctttatacatcttggtaatgactca
agagtagaaggtctagtgaatttcgaaaaactcagaatgattgcgaaggaagtgagaaca
ttaacaaatatgtgttcctcaccttatgatttactaactatgttagaaaggggtgggcaa
ccaccaagttccgcgatggtagctctgaaccaaatgactactggcaatcaaggtggccaa
actgcaacggtgaaacgacgaaaaaaatccacggctgcaccaaatccaaaaaaaatgttt
gaggaagcacagatggttcgaagagtgaaggcctatctcgcgaacatgaaagtgatcacc
gatgaagaacggttacatcaactttctgtcgattgcgaaccacatgcaggagccgttgca
gttgcagctgcagtaccattaagtggcagtcggggaaggaggcatccgtcgcctactctg
tcgactaccagtagcgccagtagtaccagtgaaggcaggaagagtatacaaggtacaaaa
ttcggcgccgcatcgccacaggcagttaggaagatgttggctctgtctgatcctcacaag
acacggccatatcaacctaagcactgtgcaccgccgctacctgtaccgggattagcgttg
cattcgagcggtttagaacctagtccaggtgcacctagaagagtaggatccggcagcagg
gtaccaatgcacgaacgatcccacagtgatacacctgccagtttaccaccgcctgtcgat
ctcagtgcagagagcagtagtgtaactagtttgagcaatctccagcctctaagaaaaacc
ttaacaagtggttcggtgacgagcagtgacagtggtcatagcactcaactggacagccac
agcgggagcagcgtggaagcgggcggcagcccaccgccaccacaaagacggcactccgct
ctgcaagggtctgttataagaggcggagcacctccatttcctcacgcggtagcagtgtta
cctccgcttcctgccaatcagaatcacaaccacaatcatcaccatcatcaccatcaccaa
cattatcacgatcatcttcttcatcatcatcaccaacccccaactcctcaaggtactacg
ggattaggagtaaacatgggcctagggatgccagctccgctgccaccacctggagcgggg
accacgaccataatgacaacgatgagtgccatggcgggtaacatgacgtcgtcgatacga
tccggcatgactaacacaccgcaatgccgtcaaccaccggcgtacaaagttgcgcagcag
atggcgagattgcatagactcggtcgtgctaacagccatgagggggtcacctatcgagga
accgatcacgaagatgatgacgaggacgctcaagtgtcagcggtttaa
DBGET
integrated database retrieval system