Atta colombica: 108687707
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Entry
108687707 CDS
T11098
Name
(RefSeq) integrin alpha-PS2 isoform X1
Organism
acoc Atta colombica
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_2
Integrin_A_Ig_1
Integrin_A_Ig_3
FG-GAP
FG-GAP_3
Integrin_alpha
bCoV_NAB
Motif
Other DBs
NCBI-GeneID:
108687707
NCBI-ProteinID:
XP_018049114
LinkDB
All DBs
Position
Unknown
AA seq
1654 aa
AA seq
DB search
MWSTRLLWASLLVGFAIVVSSTWHVADGFNIETKHYAVYRMEERSMFGFAVSTYRDRYAR
GWAIVGAPEAETAQVGVYRGGAVYKCDIAADDRCNIIHFDDKGHNHVRNPNLAGSLNQID
NKTLQWFGATVSASSKDGGPILACAPRYIWFSVSQPKYDDNRWNKESTVGNRREPVGTCW
VASNNFNESQEYSPCRTRYWGYHRQGSCQAGLGAAISKNGERLFIGAPGSYYWQGQIYSI
AAAMRLKFVATMLITEAEASGQAFSQPLNSRSRIMFTKEGPAKEDDSYMGYSVATGDFVG
NGDSGTAVGVPRGSDLLGKVLLFTSNMTNPRNLTGEQMGAYFGYAVTAGDIDGDGLDDLI
VGAPMYTVPDNPEMTIETGRVYIIYQGDGVEKFRKFDTRDGESNRGRFGLSLASLGDIDR
DGYGDFVVGAPYAGPNGRGAVYIYHGSRTGVLEKYSQVIHAEDLDNPVQTFGFSVAGGLD
LDGNVYPDLVVGAYESGAAMFFRSRPVIKMDSYVSFDSESKLISLDNRNCTLSDNNRVTC
FPLRACFKYTGEGVLIRHNFNIQYVLDVKKTKNPRLFFLELENKNTMNHTISVERDRQFC
RTVQVYVTPNIRDKLTSLDAEMRMSLEEERIPDNRHRDPRMPLRPVLGATTSRKDTLSIR
KNCGSDNICIPDLQLKVRPNVGRYLLGSGKRLELEVLVENAGEDAFEATYNLQLPAGIDY
IKIERIETLEIPVHCSAPKQSNNNTLRCDIGNPLPQRKLVKFKVLLQPVTSHGMKPIYEF
NMHVNSTNPEDLNTIYDNKENLSLPIWIETDLRVDGESKPKDLYYNPDNYTAANITTELE
LGPAVTHNYTIRNQGPSDIVEAEAFLVWPAQTLSGKTLMYLLEQPETAGPIACESANANY
LSLKLDQRKRVHLNYPDYSGVILDESQSGRTINVQRGFEIDRNKVNQKEEAEINSGDSSN
IQKSRHSSSSLSSSSSSSSITETRRIQLNPTGEKPEVLTTTYTHNSSGTSSIDSSNLSNN
RGGVVFHTESSGNYGSTTLGGGFRESEEKSFGSRLPDLEQSYGTRTNQSVRIESRWKESG
EAPGHTISPSGRYDSIITESERRYQELLKQQEDARLRQEEETRQRKFQEETQEEEIRQRK
LQEELRLRQEEETRQRKVQEEQERNFALQRHREELERRRQEEERREEWRKEEEERRRQQE
ERRLQEEREHSYDAERRYGATTDGHHPSTEDDFITGDREEAIGSREFDLHNVSSTQELNR
IFGTLSKDAAGYQVYSRQGQQYVQFKARFRTSADRKEYIEFQDGSMFPLQDRYGSQSYIS
ESTEPRDSRFLRIEGQLFIAPDSKGYIVLKDGRRFPLQGSFTHTEERTYTLRGSHDDLGS
NADNQDQGTYSQSWHEESSSATSDGGYESRYNTRTHEEKRTEERTSNTRVYGRNRDQFND
EFLTDRPDFPSSRYRRESDMVDIEEFKKFEWLHRHRRDLDEMDDPSDATTFQDDDYYQEN
DPELQTPVRPCDSAKCVMLRCVLGPLKKDQEVWISARYRVDARTLKEVALEEKVKVSTKL
VARVTKQPFIGTPAEQVIRSDEVMTNIEPSAAPSAPDMIPIWVVVLSACAGMIILLLLIY
LLYKCGFFKRNRPSDAPERQPLNRNGHFQQGEDH
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcgacgaggcttctctgggcgagcctcctcgtcgggttcgcgatcgtcgtttca
tcaacctggcacgtcgccgacggtttcaacatcgagacaaaacattatgcggtatatcgt
atggaggagaggtccatgtttggatttgctgtatcgacgtatcgtgacagatatgcccgc
ggatgggcaatcgtgggcgcaccagaggctgaaactgcgcaagttggcgtctaccgagga
ggcgcagtctataaatgcgatatcgcggctgatgatagatgcaacataatccattttgac
gataaaggacataatcacgtcagaaatccaaatctcgctggtagcttgaatcagatcgac
aataagacgttgcagtggttcggtgctacagtctcagcttctagcaaggacggaggtccg
attctggcatgtgcgcccaggtacatctggttctcggtgtcacagccaaagtatgatgat
aatagatggaataaggagtctacagtgggcaataggagagaaccagtgggtacatgctgg
gtcgcctctaataacttcaacgagtcgcaggaatattcgccttgtcgtacgaggtattgg
ggctaccacagacagggttcttgtcaagctggtttaggagctgcgatatccaagaatggc
gagagacttttcataggagcaccaggcagttattactggcaaggtcaaatatactcgatc
gccgccgccatgaggttgaagttcgtggcgacgatgttaatcaccgaagccgaagcatca
ggacaagcgttttcacaacccttgaatagccgatcgagaatcatgttcaccaaagagggt
cctgcgaaggaggacgatagttatatgggttattctgtcgcgacaggagattttgttgga
aacggagatagtggtaccgcggttggcgtcccgcgcggttccgatcttctgggcaaggtc
ttactttttacatcgaatatgacgaatcctcgaaatcttactggcgaacaaatgggcgct
tatttcggttacgcagtaactgccggcgatatagatggagatgggttggatgacctgata
gtcggtgcacccatgtatacggtcccagataatccggaaatgaccatcgaaactggaaga
gtttacattatctatcagggtgatggtgtggaaaaattccgcaaattcgacacaagggac
ggcgaaagcaaccgcggacgtttcggtttgtcgctggcttctctgggggacatcgaccgt
gatggttacggtgacttcgtcgtcggcgcgccctatgctggtccaaacggtcgcggtgcc
gtctacatttatcatggttcacggactggagtactggaaaaatattcccaagtaatccac
gcagaggacctggacaatccagtgcagaccttcggattctctgtagccggtggccttgac
ctcgatggcaatgtttatccagacttagtagtcggtgcatatgagtcgggagcagcaatg
tttttcagatcacgaccggtaatcaagatggactcctacgtatccttcgactccgaatcc
aagttgatttccttagacaatagaaactgcacactttcggacaacaacagagttacgtgt
tttccacttagagcttgcttcaagtatacgggagagggtgttcttataaggcacaatttc
aacatacaatatgtactcgacgtaaagaaaacaaaaaatccgagactgttcttcttagag
ttggaaaacaagaacacgatgaatcatacaatctcggtagaacgcgatcgccagttttgt
cgtacagtccaggtctacgtgactcctaatattcgtgataaactaacgtcgttggatgcc
gagatgcgtatgagtctggaggaagaacggattcctgacaatcgccatcgtgatcctaga
atgccattgagaccagttctcggcgcgacaacttccaggaaggatactctctctatcaga
aagaactgcggatccgataacatttgtatacccgatttacaactcaaagtgagacccaac
gttggcagatatttgttaggatctggtaaaaggcttgaactcgaagtcttagttgaaaac
gcaggcgaagatgcattcgaggcaacgtacaatctgcaattaccggccggtatcgattat
atcaaaatcgaacgtatagaaaccttagaaattcctgttcactgttctgcacccaaacaa
tcgaacaataatactttacgttgtgatattggaaatccactgccacagagaaagctggtg
aaatttaaggtgttacttcagcctgtgacgtctcacggcatgaagcctatctacgagttt
aatatgcatgttaattctacgaaccctgaagatctcaatactatctatgataacaaagag
aacttgtcattgccgatctggatagagacagatttacgcgtcgacggtgagagtaagccc
aaggatctgtattataaccctgacaattacactgccgcaaacattacaacggagctcgaa
ttggggccagcggtgacacataattataccattcgcaatcaaggcccatcggatatcgtc
gaggcagaagcattccttgtatggcctgcgcagactttatctggaaagacattgatgtat
ttattggagcaaccggagactgcgggtccgatcgcttgcgaatctgccaatgcaaattat
ctcagtttgaagttggatcagcgcaaaagagtgcacttgaattatcccgattactccggc
gtaatcttagatgagtcgcagtcaggcagaacaatcaatgttcaaagaggctttgagata
gatcgtaacaaagtgaatcaaaaggaagaagcggagattaatagtggcgatagttcgaat
attcagaaatcacgacactcctcctcctcgttatcgtcttcttcctcttcttctagtatt
accgagactaggaggattcagctaaacccaacgggagaaaaacccgaagtacttaccaca
acgtatacgcacaattcttctggaactagctcgatcgatagcagtaatttatctaataat
cgcggcggcgttgtttttcatacggaatcaagcggtaattacggttccacaactttaggc
ggagggttccgtgaatctgaagaaaaatcctttggttcgagattgcctgatctcgagcag
tcctatggaacacgtacgaaccaatctgttaggatagaaagtcgttggaaagaaagcggt
gaagcgccaggacacacgatctcaccttcaggaagatacgattcaattattacagaaagc
gaaaggagataccaagagctattgaaacagcaggaggatgctcgtttgcgtcaagaggag
gagactcgacagaggaagtttcaggaagaaactcaggaggaggagattcgacaaaggaag
cttcaggaagagcttcgtctgcgacaggaggaggaaactcgacagaggaaggtgcaagag
gagcaagaacgtaactttgccctacaacgtcatcgagaagagttagagcgacgtcggcag
gaagaggaacgaagagaggaatggcgaaaagaagaagaagaacggcgaagacaacaagag
gaaagacgcttgcaggaagagagagaacatagctacgacgcggaaagacgctacggagcg
accacggatggtcatcatccatctacggaagatgatttcatcactggcgaccgcgaagag
gcaatcggaagtcgagaatttgatttgcataatgtcagctccacgcaagaattgaaccga
atctttggcacattgtcgaaggatgcagctggttaccaagtatatagtagacagggacaa
cagtatgtacagttcaaggcaagattcagaacatccgctgacaggaaggaatacatagag
ttccaggacggttctatgtttcctcttcaagatcgttatggtagtcaaagttacatctcg
gaatccacagaacctcgcgacagtcgattcctcagaatagaaggtcagctatttattgct
ccagatagtaaaggttacatcgtgttgaaagatggccgaagatttcctcttcagggttct
ttcacgcacacagaggaaagaacgtacactttacgtggttcacatgatgatttaggtagc
aatgctgataatcaagatcagggaacttacagtcaatcttggcatgaggaatcatctagt
gcaacttcggacggaggttacgaaagcagatataatactcgtacacatgaagaaaaacgg
acggaagagagaacaagcaataccagagtctacggaagaaaccgtgaccagtttaatgat
gagtttctcactgacagacccgattttccaagctcgcgatatagacgcgagagcgacatg
gtcgatattgaggaattcaagaaattcgagtggcttcacagacatcgacgagacctcgac
gagatggacgatccgtcagatgcaactacgttccaagatgacgattattatcaggaaaac
gatcccgagttacagacaccagtacgaccgtgcgattcagcaaagtgcgttatgttgcga
tgcgtgctaggaccattgaagaaagatcaagaagtatggattagtgcgagatatcgcgtg
gatgctaggactttgaaggaagtagctcttgaagaaaaagtgaaagtgtcaacgaaattg
gtagctcgtgtcacgaagcaaccattcatcggtacgcctgctgaacaggtcattaggagc
gacgaagttatgacgaatatcgagcctagcgcggcaccttctgctccagatatgattcca
atatgggtggtagttctgtcggcctgcgcgggaatgattatcctcttgctactcatttat
ttgctttataagtgtggtttcttcaagaggaacagaccttccgacgctccagagagacaa
ccgctaaaccgaaacggccattttcaacaaggcgaggatcactaa
DBGET
integrated database retrieval system
