Atta colombica: 108687715
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Entry
108687715 CDS
T11098
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
acoc Atta colombica
Pathway
acoc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108687715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoc03021
]
108687715
03036 Chromosome and associated proteins [BR:
acoc03036
]
108687715
Transcription machinery [BR:
acoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108687715
Coactivators
SAGA/TFTC/STAGA complex
108687715
Chromosome and associated proteins [BR:
acoc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
108687715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
SAGA-Tad1
TAF
Motif
Other DBs
NCBI-GeneID:
108687715
NCBI-ProteinID:
XP_018049124
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MASAKFLEEALSTDVDESAVNAIVGSLETQLVTSTPTVAGHQASSASVSQQNHQVNSAIS
NGGTITAVQPQKHGVSNGGGATTVNSLMTQEVTKSITTSTLLPVNVVTSNTVAPQVITTQ
QQQPPPQVQPQQQQQQQHTQPPGISPATYINQVTTNQVSSNQTTHIPSLTKTHEPVKLIY
PTVGQVIATTGVANANNKLSFPAQTVGQLANGTLGITSQAVLQTTANVVTNVGSVSQAGS
QTVTAVNKPTGAALVIKTSVAPGMVSVPMSVPVSVAGNAVSTALQAKGGVTSTIVPSNVQ
ILNVNTMRPATPVAGQQANKQVTPRVVIGQHQLVGARAGGPGITLQALHSLQAGAQGHLL
LKTENGQYQLLRVGPAPTAGTPTGTAVTPNSITGNAVVAAPSPGTTYRLTSVPTVSRLNT
QFTGPPLATLRKSVQTVAPTLTTSTTTPGTVTTAPTTTSTPTATTVQTAQTSTPRQTTDN
TKEKCRKFLANLLELSSREPKAVERNVRTLIQELIDTKVEPEEFCDRLEKLLNASPQPCL
IGFLKKSLPLLRQSLVTKELVIEGIKPPPANVVFSIASAVVPTITQSQYRPAVAVAAAAA
ATVPVTATATATTQVRVMTPLPTAVTTATVVTTTVPRPVQTIPQRLVRPVTTVVRSPTAA
YTVKSTVATTGIRPTAPVVQKPPIITTTVVKPITTTQGKTLNTTTTVNKAVVPSLVQKPA
AKEKEKKTFSSAGYTADDDINDVAAMGGVNLAEESQRILGSTEFVGTQIRSCKDEVFLHM
TPLQQRIKQIASSHGLEEPNQEVAALISHAVQERLKNLVEKLAVITEHRIDLIKVDPRYE
VTQDVRGQLKFLEDLDRIERRKHEEQERELLLRAAKSRAKTEDPKQAELKAKAKEMQRAE
MEQLRTRDANITALQAIGPRKKPKLDTAGSTNSTPSANASVSGLNRQMPMRPRLKRVNFR
DLIFLLEQEKETCRSTTLYKSYLK
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagctaagtttctggaggaagctctgagcacggatgtcgatgaatccgcagtg
aatgcgatagtgggctccctcgagacgcagcttgtgacgtccacgccgaccgtcgccggc
catcaagcgagttccgcatcggtcagccagcagaatcaccaggtgaacagcgctatttcc
aacgggggcaccatcaccgcggtacagccacagaaacatggggtttcaaacggcggcggt
gcgactaccgtgaatagtctaatgactcaggaggtcactaagtcgattactaccagcact
ctgctgcctgtgaacgtggttacctcgaacacagtggcgccacaggtcatcaccacgcag
cagcagcagccgccgccgcaggtacagccacagcagcaacagcagcagcagcacacacaa
ccgccaggaatatctcctgctacttatatcaatcaagtgacgactaatcaggtgtccagt
aatcagactacacatataccaagtttgaccaagacgcacgaaccagtgaagctcatctat
cccacagtcggacaagttattgccactacgggggtggcaaatgctaataataagctctcc
tttcccgctcaaactgtcgggcagttagcaaacggtactttaggtataacgtcgcaagca
gtgctgcagactacagcgaacgttgttactaatgttggctctgtgagccaggcggggagc
caaacagtgaccgcagtgaataagccaacaggggcagctttagtgattaagacaagtgta
gcgcctggcatggtttctgttccaatgtctgtaccagtctctgtggctggcaatgcagtc
agcacagcattgcaggctaagggtggggttacttcgacgatagtacccagtaatgttcaa
atccttaatgtaaatacaatgcgtcctgcaacgccggtagcgggacagcaagctaataaa
caagttacaccaagagtggtgattggacaacatcaattggttggagctagagctggaggt
ccagggataacgttacaggcacttcatagccttcaagctggtgctcaaggtcatctgtta
ttaaaaacagaaaatggacagtatcagttactaagggtgggtccagctccaactgcgggt
actcccactggtactgctgttacaccgaatagtataactggcaatgcagtagttgctgca
ccatctccaggcactacgtaccgcctaacttcagtgccgactgtaagtaggctgaatact
cagttcactggcccaccactcgccaccctaagaaaatctgttcagactgttgctcctact
cttactacatctactacaaccccaggaacagtgactactgcacccacaactacttctaca
ccaacggctaccactgttcaaacagctcaaacttctacaccgcgtcaaactactgataat
accaaagaaaagtgccgtaaattcttagcaaacttattagagttatctagtcgagagcct
aaagcagtggaacgcaatgttcgaactttgatacaagaactgattgatactaaagtcgag
ccagaagaattttgtgacagacttgaaaaattattaaatgcttcaccacaaccatgtctc
attggatttttaaagaaaagtttgcctcttttacggcaatcactcgtcacgaaggaattg
gtcatagagggaataaagcctcctccagccaatgttgttttttctatagcgtcggctgtt
gttccaactattacgcaatcacaatacagacctgcagtagcagtggcagcggcagcggca
gcaaccgttcctgtaacagcaactgcaacagcaacaacacaagtgagagtaatgacaccg
cttccaacagcagtaacgacagcaacagtagttacaacaacagttccacgaccagttcaa
actattccacagaggctggttcgaccagtaacgacggtggttcgaagtcctaccgcagca
tatacagtgaaatcgacagtagcaacaactggaattcgccccactgcccctgttgttcaa
aaaccacctataattacaaccacagttgtaaaaccaatcactactacgcaaggaaaaaca
ctcaataccaccactactgttaataaagccgtagtgccttctcttgttcaaaaaccggct
gcgaaggaaaaagagaaaaaaacgttttcatcagcaggatatacggcggatgatgacata
aatgatgtagcagctatgggtggtgttaatcttgcggaggaatctcaaagaatactcggt
tctacagaatttgttggaacccagatacgatcttgtaaagatgaagtatttttgcacatg
acgccattacaacaaagaattaaacaaattgcatccagtcatggactagaagaacccaat
caagaagtagcagcattaatttcgcacgctgttcaagaaaggttaaagaatttagtagaa
aagttagcagtcatcacagaacataggatagatcttataaaggtcgatcctagatatgaa
gtaacacaagatgtaagaggacaattaaaatttttggaagatctagatagaatcgaacgt
agaaaacacgaagaacaagaacgggaattacttttacgtgccgcaaagagtcgtgcaaaa
acagaagatcccaagcaagcagaattaaaagctaaggccaaagagatgcaacgcgcagag
atggaacaattaagaacaagggatgcgaatataacagctttgcaagcaattggccctcgt
aaaaagcctaaactcgatacggcaggatcgaccaacagtactcctagcgcaaatgcatca
gtgagcggattaaataggcaaatgcccatgagaccacgtttgaagagagtgaacttcagg
gatttaatatttcttctcgaacaagagaaagaaacatgtagaagcacaacactgtataaa
tcgtacttgaagtga
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integrated database retrieval system
