Atta colombica: 108687789
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Entry
108687789 CDS
T11098
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
acoc Atta colombica
Pathway
acoc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108687789
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
acoc01009
]
108687789
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoc04131
]
108687789
03029 Mitochondrial biogenesis [BR:
acoc03029
]
108687789
Protein phosphatases and associated proteins [BR:
acoc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108687789
Membrane trafficking [BR:
acoc04131
]
Autophagy
Autophagosome formation proteins
ULK complex
108687789
Mitochondrial biogenesis [BR:
acoc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
108687789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
ubiquitin
DUF6664
Motif
Other DBs
NCBI-GeneID:
108687789
NCBI-ProteinID:
XP_018049228
LinkDB
All DBs
Position
Unknown
AA seq
1459 aa
AA seq
DB search
MLYIFHVDTGTTITFDIKLALQSVSQLMEAIERECGVVAAHQVLLMSGGECLEPNARVCS
YSAGTDTNPIYLFSKAAIESSLPPTPSIDYGSDVDLQTQIDASLAMPATYQTLCARAHLA
QQCCGLAREQTRICERLVHDQHLQQQGWAAVVANLEDITHMFQSRAEQFQQAFVLYLAER
QQHMKLLDNFSADLGTLAKIPILPALRAQAEGLLSPDDQPSQTSETVSEDSGEVLSLLRW
ISAKDNQSSLEQVAEQCSRGLEQFDERLMQALKAEVNGAVDNANKQDMKEIKGLGERLFA
LEQLMVQTKRLVHEQGELAQGFLQNQNRASNLGDASVLPDLCNSHRRQLLVMLQNHNQLR
DIRRRCTKAKEELSVNIYHRLKWIMYVENKMVEVGNKLIIYHESLKRLRRHLEVLQQIHL
APQMYISAVVEVVRRRTFSQAFLVWASNLACQLLTVHSEELARRREFQSKFDGHFLNTLF
PGLEDTPPPFATQAPSVFDNGLPKLTADDMESLRSQLPDLALTISTPDLSSITQFFLSKS
FTEGSTDGTKEKDTTSVSTDIPTKEQERTRAPLLSDRGDFESETDTEEFEKIGQAGVEVT
KPGVFDGAKQKRQKQLEVGASRSVSPASSTSTNVSPLNSKVADLTTRSTTSSEPGSFQFP
SLSATSERPVQLSPLTECVENGAADSSSCLLRRGVSGLLNYRDAIPLEEQHSLSPNPPSL
RSSIMCDGQHQQHQHPLSGSGGSSPSVGVGATDFMGTEFYMDESLPSSLSEHPADGQHQA
IVSLLQENLGNTREEVERLRSILKTMKTVVCEELSSVRNELAILRNQSNEDKNGIVEMTE
RVRVALSLHSREYDRRLQEREQEMTIEHEYEIADVKKLMQNREEEICTLKRNLLERETEL
AEHERLVATMHQKLEDEQIERRNLHDRLHQQLEDYSRVLEQARIDKEEAVKKLNDERFLE
ITSLTNSLTQCQKRIQELEENLVTARNDQERMVKEATDKLQMEYKTELETIRSRFKLMTA
STMERSPSDSSLEKIERTDVIELVNHEAILAQAREDMKIENAVAIRTAIIKERADCMTKL
DNELRLAKEVVEEKNREIEMYRMRTIALIEQGKHYKHTIDRLLGDFELKSEIQQTLMEKM
KNLEADKACLENKEAADKAMRTVVEQNDDIVYPLEAGVCKDLSYDRLDASQILEDIFKES
EKYEVEVSESKKVRLEADDDDLARLSRRLESLENDNKRLSCELNSIRASKIAAEAKVEAL
MTDKIRLEVELLKERTKRTFGIDPMPENRDKDMNASVAVVSDSNSSRDAATSPEPMSRRS
SSKSMCFHPSLPSYVHKKVAEKVAKMVQQGIVTITSCNPGDVVLVVWDAVHCNYAVYQES
STFYFLHSDCVGAMEGMNPSASRKCVLAEVIDKEYCHARKHENRYHVPRGTKFYRVHAKP
RDARALTDETGLMSKSQLP
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgctgtacatcttccacgttgacaccggcaccaccatcaccttcgacatcaagctggca
ctgcaaagtgtcagtcagctgatggaggcgatcgagagggaatgcggtgtggtagcggcg
catcaggtgctgcttatgagcggaggcgaatgcttggaaccaaatgcacgtgtgtgctct
tactcggctggaaccgacacaaatcctatttatctgttcagcaaggccgccattgaaagc
agcctcccgcctacgccgagtatagattacggttccgatgtcgacctgcagactcagatc
gatgcttcactggcgatgccagccacttatcagaccctttgcgcacgtgctcatttagcc
caacagtgttgtggcctggcgcgtgagcagacgaggatctgcgagaggctggttcacgat
cagcatctccagcaacaaggctgggccgcagtggtcgccaatctcgaggacatcacgcat
atgtttcaatcacgagccgagcagttccagcaagccttcgtcttgtacctcgccgagagg
cagcagcacatgaagctccttgataacttcagcgccgatctcggtactcttgcaaaaatt
ccaattttgccggccttgagagctcaagccgagggcttgttgagtccggatgatcaaccg
agtcaaacttccgaaactgtatcggaggatagtggggaagtactaagtctgttacgatgg
atctctgcgaaagacaatcaaagcagcctagagcaagtggcagagcaatgctcgcgtggc
ctggagcagttcgatgaacgattgatgcaggccttgaaggcagaagtgaacggggctgtc
gataatgctaataaacaggatatgaaagagattaagggtctaggcgagaggctgtttgct
ctggaacagttgatggtgcagaccaagagacttgttcacgagcaaggcgagcttgctcaa
ggttttctgcagaatcagaatcgcgcgagcaatttaggcgatgcgagcgtcctgccagat
ctttgcaattctcatcggcggcaattgctcgtcatgttgcaaaatcacaatcaactgcgc
gatatccgccgcagatgcaccaaggcgaaggaagagttgtcggtgaatatctatcatcgc
ttgaaatggatcatgtacgtggagaataagatggtggaagtgggcaacaagctaatcata
tatcacgagagcctgaagcggttgcgacggcatctggaagtgctccaacagatacactta
gctccgcagatgtatattagcgcggtggttgaggttgttagaaggcgcaccttctcgcaa
gcttttctcgtatgggcaagcaatctggcgtgccaactgttgactgttcatagcgaggag
ttggcacgtaggcgagagtttcagagcaaatttgacggtcacttcttgaacactctcttc
cccggtctggaggacacaccaccgccttttgcaacgcaagcaccttccgtttttgacaat
gggctacctaagctgaccgcggacgacatggagtcattgcgatcccagcttccggatttg
gcgcttacaatttctacgccggatttgagcagcataacgcaattcttcttatcgaaaagc
ttcaccgaaggtagcaccgatggtactaaggaaaaagacaccacatcagtgagcaccgat
attcccacaaaggaacaagaacgcactagagcgccattgttatctgataggggcgatttt
gaatccgaaactgatacggaggagttcgagaaaattggtcaagccggcgtggaagtaacc
aagcctggcgtgttcgacggggcgaaacagaaacggcagaagcaattggaggttggtgcc
tctcgaagcgtgtcccccgcttcctcgacctcgactaatgtctccccgttaaactcgaaa
gtcgcggatttaacaacacgttcgaccacatcaagcgaacccggctctttccaatttccc
agtctatccgccacgagcgagcgtccggtgcagctaagtccgttgaccgagtgcgtggag
aacggtgccgccgattcttccagttgtttgcttcgcagaggcgtgagcggtctcttgaat
tatcgtgacgctataccgctcgaggagcaacattccctgagtccgaatcctccttccttg
cggtcctccatcatgtgcgacggccagcatcagcaacatcagcatccgctatccggtagc
ggaggtagcagtccctccgtcggtgtaggtgctaccgacttcatgggtacggaattttac
atggatgaatctctgccgagcagccttagcgaacatcccgccgacggccagcatcaggct
atcgtgtccctccttcaggagaatctcggtaatacgcgtgaggaagtggaaaggttgcgt
tctatcctgaagaccatgaaaacggttgtatgcgaggaactcagttccgtgcggaatgaa
ttggcgattctgcgaaatcaatctaatgaggacaagaacggtatcgtcgagatgacggag
cgcgttcgagtggcattgtccttgcactcgcgagagtacgatcgacgtcttcaagaacgt
gaacaggaaatgacaatcgagcacgagtatgagatcgcggatgttaaaaagctaatgcag
aatcgtgaggaagagatctgcacgctcaagcgtaatcttcttgaaagagaaactgaattg
gcggagcatgagcgactggtggccacgatgcatcaaaaattggaagacgaacaaattgag
aggagaaatttacatgatcgtttacatcaacaactcgaggactattcgagggtactagaa
caagcgcgcatagataaggaagaggccgtaaaaaaattgaatgacgagagatttctcgag
atcacttctttaacgaattcattgacacaatgccagaagcgaattcaagaattagaggag
aatctggtcaccgcgcgcaatgatcaggagagaatggtgaaggaggcaactgataaattg
cagatggaatataaaacggaattagagaccattcggagccgcttcaaacttatgaccgct
tctaccatggaaaggagtcctagcgattctagtttagagaaaatcgaacgaacagatgtt
attgaacttgtaaatcatgaggcaattttggcgcaagcaagagaagatatgaaaattgag
aatgctgtagcaatccgtactgctatcataaaggaaagggccgattgcatgacaaaattg
gacaacgaattaagattggcgaaggaagtggtcgaagagaaaaatagggaaatagaaatg
tacagaatgagaacgatcgcgctgatcgaacagggtaaacattataagcatacgatagat
cgattacttggagatttcgaactgaaatcggagatacagcaaactttgatggagaagatg
aaaaatcttgaagcggacaaggcgtgtttggaaaacaaagaagccgcagacaaagcaatg
cgaacagttgtggaacaaaacgatgatattgtgtatcctctagaagctggagtatgcaaa
gacttgagttacgatcgattggatgctagtcaaattctagaagacattttcaaggaatcc
gaaaagtatgaggttgaggtttcagaatcgaagaaagtacgattggaagctgacgatgat
gatctggctcgactatcgagacgacttgaatctctcgaaaatgacaataaaaggctgtcc
tgcgagctaaattcgatacgcgcgagtaaaatagcggctgaagcaaaagtagaggcatta
atgacggataaaattcgtttggaggttgagttgctgaaagagcgtaccaagaggacattt
ggtattgatccgatgccggaaaatcgcgacaaagacatgaatgcgtcggtcgcagtcgtt
tcggactctaattcaagtcgggacgcggccacgagtccagagccgatgagtcgacgatca
tcttccaaatcaatgtgcttccacccctcccttccctcatacgtacataagaaggtcgca
gaaaaagtggcaaagatggtgcaacagggaattgtcaccatcactagttgtaatccaggt
gatgtggtactcgtagtctgggacgctgtacattgcaattatgcggtgtatcaagaatct
tcgactttttatttccttcattcggactgcgtaggtgcaatggaaggaatgaatccgagt
gcttctcggaagtgcgttctcgctgaagtgatcgataaggagtactgtcacgcgagaaag
catgaaaatcgataccacgtcccacgtggcacgaaattctacagagtgcatgctaagcca
cgagatgcacgcgcgctgacagacgagacgggtttgatgtcaaagagtcaactaccgtaa
DBGET
integrated database retrieval system
