Atta colombica: 108687808
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Entry
108687808 CDS
T11098
Name
(RefSeq) putative DNA helicase Ino80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
acoc Atta colombica
Pathway
acoc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108687808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoc03036
]
108687808
Chromosome and associated proteins [BR:
acoc03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
108687808
INO80 complex (yeast)
108687808
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
HDA2-3
ResIII
AAT
Motif
Other DBs
NCBI-GeneID:
108687808
NCBI-ProteinID:
XP_018049273
LinkDB
All DBs
Position
Unknown
AA seq
1648 aa
AA seq
DB search
MSDRANAMKLEAEMAAPLHLQRLERSLNVQPFLKQIDNLFQEQASEDDKSVSSESSDGSD
AYLDNVPTRKEEARINKLRLYNMSSVGEERRWLQDILLSDSSDSSASGSDTDSQITEEDF
QEMLKFHILRKKYQGRFYQKPENIQYQYYSAGLLSNYDRFLEHQKLIVGNKKKKEKKPEK
KIMKIKKEKINRHCTSEEYRKGEYLEGEWDKSIPREEELDESELEAIMRHQPRGRGRKKH
NTKSVEVMTMRRRKIWVMMSKKELGKVQRAKTNNHKEMLISCKKVAQHCMKYWRQKAMQS
QRNMKDTIWRAKRLTREMQTYWKRYDRVERETRRRLEKEAEEQRKMDVELIEAKRQQRKL
NFLITQTELYAHFMSRKIDKASTEEQLRILNQLDEEKNPRLIGIDDYDSEIMKQKAKKNA
TEAFNNEKARTKQFDTAAASQELRLSDTPENLEHPQPSIFKGNLKGYQLKGMNWLANLYD
QGISGILADEMGLGKTVQSIAFLCHVAERYSVWGPFLIISPASTLHNWQQEMARFVPVFK
VVPYWGNPQERKILRQFWDTKDLHTKEASFHVVITSYQLVITDYKYFNRIKWQYMILDEA
QAIKSTSSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPTLFDSHDEFNEWFS
KDIESHAENKTGIDEKHLSRLHMILKPFMLRRIKKDVENELSDKIEVMVYCPLTTRQKLL
YSALKKKIRIEDLLHYTVGGGDTASNDKNFTSNLMNLVMQFRKVCNHPELFERRDAKSPF
FMNTEFYNMPALLYNEGLLHLAFPSKDHLLYNRLFIFTAEYIHRALHCNEDSRENTFSFS
RFIDLSPMEMNKSFIAGTLFRLCLITFMERRLRMVQYWENWHVDNRSRTSTNQMFYLPKK
FDGLSTMLQDIFFTSKIIEGEAFYTHTNHTIHSMPETVAHRILRSSKKANQLLKLQRILP
TGKIDQTEDSKLALLPEHPHHPRQPVMRYCQQTTIPAFVCDNNPKVQASPRKLYVSNSSA
ACAWKRHEECGGPFGQRLLWLGCERALSEEKLGIRASQTMSTFCYQPQGGLSACAPINGW
SHIIVPDKQTLVTDAGKLSVLDSLLRRLKEQGHRVLIYSQMTKMIDLLEEYMYHRKHTFM
RLDGSSKISDRRDMVADFQKRADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQ
AMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDTLKPKEVV
SLLLDDEEIEAKYSQRSEERKQQRAEEARLESNLQYKERDRKRKLTALPVKNDAKKPCHT
DANGDKNNDTIYVNLNESKPATNLIQSQHQNNHHQQLENIDNYSTPTSPAKSEDETSNEG
LVVDVDGPVTVSGNDPHGQPRGNLHQFGESPVKIARLGHFAFGMGANARMRQSVRGASKR
GRPRGSRRGGPIGGKGRGLLLMHPLSKVSNMASEPSSTAMSPNDGGGCSNEVLRHWTSAT
SDPVDGDGPSTVGPLGPVGSLIPLSGRSGAAGIRRGPGRPRLRPTGPGHQGYRTPGHHHS
KKVQRPLPVPIRSHQTVAGVNQQKASSSSQKRPGMSVTGTSSSSSSSVAAANSTLLSSSS
SSSSSSMSLAESRPFGFYTQQQPRTGSS
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatagagcaaacgcgatgaagctagaagctgagatggctgcgcctttgcatctg
cagagactggaacgcagcttgaatgtacagcctttcttaaagcagattgataatcttttt
caagaacaagctagtgaagatgacaagtctgtctcatcggaatcttctgatggttcagat
gcttatcttgataatgtacccacacgaaaagaagaagcaagaatcaataagttaagactg
tacaatatgtctagtgtaggagaagaaagacgttggttgcaagatattcttttaagtgat
tcctctgatagttctgcatcaggttctgacacagatagccaaatcacggaagaagatttt
caagagatgttgaagtttcacatattacgaaaaaaatatcaaggtcgtttttatcagaaa
ccagaaaatatacaatatcaatattatagtgcgggtttattatccaattacgatagattt
ttagaacatcaaaagttaattgtgggaaataaaaagaagaaagagaaaaaaccagaaaaa
aaaattatgaaaatcaagaaggaaaaaattaatcgtcactgcacatctgaggaatatcgt
aaaggggaatatctggagggagaatgggataaatcaattcccagagaagaagagttagat
gaatctgaattggaagctatcatgcgtcatcaacctcgaggtagaggtaggaaaaaacat
aatactaaaagtgttgaagtgatgacaatgagaagaagaaaaatatgggtgatgatgtct
aaaaaggaattaggaaaagtacaaagggcgaaaaccaataatcataaggaaatgctaata
agttgtaagaaagtagcgcagcattgtatgaaatattggaggcaaaaagccatgcaatcg
cagagaaatatgaaggatactatctggagagcaaaacgtttgacaagagaaatgcagact
tactggaaacgttatgaccgagtcgaacgggaaactagaagaagattagagaaagaagct
gaagaacaacgtaaaatggatgtagaacttattgaagcaaaacgtcagcaaagaaaatta
aattttcttattacccagacagaattatatgctcattttatgtcgcgaaaaatagataaa
gcgtcaacagaggaacaattaagaatcttgaatcaattagatgaagaaaagaatcctaga
cttattggcatcgatgattatgatagtgaaatcatgaaacaaaaagcaaagaaaaatgct
actgaagcatttaacaatgaaaaggccagaaccaaacaatttgatactgctgctgcatct
caagaattacgtctcagtgatacgcctgagaatttggagcatccacaaccttcaattttt
aagggaaatctgaaaggttatcaattaaaaggaatgaattggttggcaaatttgtatgac
cagggtattagtggaatactagctgatgaaatgggtctgggaaaaactgtacaatctata
gcatttttatgtcacgttgccgagagatattctgtttggggaccatttttaattatatca
cctgcttcaacattacataactggcaacaagaaatggcaagatttgtgccagtatttaaa
gtagttccatactggggtaatcctcaagaacgtaaaatactcagacaattttgggatact
aaggatttacacacaaaggaagcttctttccatgtagtaataacaagttatcaattagta
attacggattataaatattttaatagaataaaatggcaatatatgatcttggatgaagca
caagctataaaaagcacgagcagcatgagatggaaattgttattgggatttagttgtcgt
aatagattattgcttagtggtacgcctatacaaaatagcatggcagaactatgggcgtta
ttacattttattatgcctacattattcgattcgcacgatgaatttaacgagtggttttcc
aaagatattgaaagtcatgcggaaaataaaacaggaatagacgaaaaacacttatcaagg
cttcatatgattttaaaaccttttatgttacgaagaataaaaaaggatgtagaaaatgaa
ttatccgataagattgaagtaatggtatattgtccacttacaactcgtcaaaagttactt
tattcagcgctgaagaaaaaaattcgaatagaggatttgctgcattatacagtgggcgga
ggggacactgcatccaatgataaaaactttacttccaatctaatgaatctagtcatgcaa
ttccgaaaggtctgcaatcatccagaactctttgaacgtagagacgctaaatcgccgttt
tttatgaacactgaattttataatatgcctgctttattgtataatgaaggacttttgcat
ctagcatttccatccaaagatcatctattgtataataggttgtttatatttaccgcagaa
tatattcaccgtgctcttcactgcaacgaagattcacgcgaaaatacattttcatttagt
agatttattgatctatctccaatggaaatgaacaaatcgtttatcgctggtactttattt
agattatgtttgataacgtttatggaaagaagattaagaatggtgcaatactgggaaaat
tggcacgtcgataacagatcgagaacatctacaaatcaaatgttttatttacccaaaaaa
tttgatggtttgtcgacaatgttgcaagacatattctttaccagcaagataatcgaaggc
gaagctttctatacacataccaatcatacgatacattcaatgccagaaaccgtcgctcac
agaatactacgtagtagtaaaaaagctaatcagctattaaaattacaaaggatattaccc
actggtaaaatagatcaaacggaagattcgaaattggctttgcttcctgaacatcctcat
cacccacgacaacctgtaatgcgatattgccaacaaacaacgattcctgcctttgtttgc
gataataatcccaaggttcaagctagtccacgaaaattatacgtcagtaatagttccgca
gcatgtgcctggaagaggcatgaggaatgtggtggtccattcggtcaaagattactttgg
ctcggttgtgaacgagcactttctgaagaaaaattgggtattcgtgccagccaaacaatg
tctacgttttgttatcagccgcaaggtggattatctgcgtgtgctcctattaatggatgg
tcacatatcattgtaccagataaacaaacgttagtgacagatgctggtaaactttctgta
ttggacagtcttttacggcgtctgaaagaacaaggtcatagggtactgatctattctcaa
atgacaaaaatgattgacttgctagaggaatatatgtatcatagaaaacatacatttatg
agattagatggttcgtcaaaaatctcagatcgtcgagacatggtggcagattttcaaaaa
agagcggacatattcgtctttctactcagtactagggctggtggcttgggaatcaatctc
actgcagcagatacggtaatattttatgatagtgattggaatcctactgtagaccaacaa
gctatggatcgcgcccacagactggggcagaccaaacaagtcacggtctaccgattaata
tgtaaaggaaccatcgaagaacgaattttgcagagagcgcgtgaaaagagcgagattcaa
cgtatggtcataagcggcggaaatttcaagcccgatactttgaaacctaaagaagtcgtg
tcactgctattggatgatgaggaaatcgaagcgaaatacagccaacgaagcgaggagaga
aagcagcaacgggcggaggaggctcgcctcgagtcaaacttacagtacaaggagagggac
cggaagaggaagttaaccgcgcttccggtcaagaacgatgcaaagaagccatgtcacaca
gacgctaatggcgacaaaaacaacgatacgatttacgttaatcttaatgagtctaaaccg
gctaccaatctgattcaatcgcagcaccaaaacaatcatcatcaacagctagaaaatata
gataattacagcacaccgaccagtccagccaagtcagaagatgaaacgagcaacgaggga
ctcgtggtcgatgtagacggtccggtgacggtttccggtaatgaccctcatggacagcct
cgaggcaatcttcaccaatttggagaatctccagttaaaatcgcccgacttggacatttc
gctttcggcatgggtgcgaacgcgcgaatgcgacaatccgtgcgtggcgcgagcaaacgc
ggtcgaccgcgaggttctcgtaggggtgggccaattggcggtaaaggaagaggactgctt
ttaatgcatccattgtcgaaggtttcaaatatggccagtgaaccgtcatcgacagcgatg
tcaccaaatgatggaggcggatgctctaatgaagtattgcggcactggacgtctgcgact
tccgatcctgtggacggggatggtcccagcacggttggtccattaggtccagttggcagt
ttgatacctttatcgggacgcagtggagctgcagggatacgtcgtggccctggtcggccc
cgattacggccaactgggcctggacatcaaggctatcgcactcctggtcatcatcatagt
aagaaggtccaacggccgctgccagtacccatcagatctcatcaaacggtcgcaggtgtc
aatcagcaaaaagcatcttcatcgtcgcaaaagcgtcctggcatgtcggtgactggtact
tcatcttcgtcgtcatcttcagtcgcagccgcgaattcgacactgttatcttcatcatcg
tcatcgtcatcatcctcaatgtcgttggcggaatcacgccctttcggattttacacgcag
caacagccacgcacaggatcatcgtag
DBGET
integrated database retrieval system