Atta colombica: 108688016
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Entry
108688016 CDS
T11098
Name
(RefSeq) pumilio homolog 3
KO
K14844
pumilio homology domain family member 6
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108688016
03009 Ribosome biogenesis [BR:
acoc03009
]
108688016
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108688016
Ribosome biogenesis [BR:
acoc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108688016
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPL
Transposase_32
Motif
Other DBs
NCBI-GeneID:
108688016
NCBI-ProteinID:
XP_018049568
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MKRSAESLDTDDLKAENNVDAGNNKKRKKVTFEKSLDNKFTDKNVKLSLTKKNSKGKNTK
VTKAGKNNAIEKIKLLKLKRERKQVEQKSEDQKNLKKENLKKLEKSTTKKTDWLQLKKEK
KELREKRKAKKLNNDAVFDKIIRAKQINEKLRRSDCKSVDRVTLTKTLHNMLKNHYNKVI
FTHDMSRVVQCIIKNCEAHVLQAISQEIKPFIVEMLQSKYAKNCVKAILKHGSQEIRREI
ISGFYGNIVKLMSHSVSASFVELTYSTWCTSLEKIYFKQEFFGDMYKLEKDKEIKSLSDV
FKTAIDMKLATLSAIKANLIRILNKGFVNSTLLQTILWEFLCVCSVEDRNELIVMLRSYI
ITLSQTKMGVRVAMQCIWHSTSKDRKIIMKALKGNVKAICMSKHGHMTLLALFDSVDDTV
LMQKIILSELQEDLVNIALNEYGKHVILYLVARRKSLYFSPAVVEYLRQGDNNSASKKSA
DIREKELLEAICGPLFDAIIANTATWLCNSSIVMTTLAILKVGSGEKLNFAFESIAKFIS
STDSKIKDNDIEYDVVEHPGLHTMLKKLIQYDKELLKKNECTFGEILISHLTPKVLEKWI
EFNRACFLLILFIENEIAINILLVKLKPLIENLKKKHSVGASILLKKLTE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgatcagcagagagtttggacactgatgacctgaaagcagaaaataatgttgat
gcaggaaataataaaaagagaaagaaagtgacatttgaaaaatctctggataataaattt
acagataaaaatgtaaaactgtctttaacaaagaagaactcaaaaggaaagaatacaaaa
gtaacaaaagcggggaagaataatgcaattgaaaaaataaagttgctcaaattgaagagg
gaaagaaaacaagttgagcaaaaatctgaagatcagaagaacttaaaaaaagaaaatttg
aaaaaattagagaaaagtacgaccaagaaaactgattggcttcaattaaagaaggagaaa
aaggaacttagagagaaacggaaagctaaaaaattaaataatgatgcagtatttgacaaa
atcattcgggctaagcagatcaatgaaaagttacgtaggtctgattgcaagtctgtcgat
cgtgtaacgttaactaagacattgcacaatatgctgaaaaatcattacaacaaagtgata
tttacacatgatatgtccagagtagttcaatgtataataaaaaattgcgaagcacatgtt
ctgcaagctatatctcaagagataaagccattcatcgtggagatgttacaatctaaatac
gcaaaaaattgcgtaaaagctattttaaagcatggctcgcaagaaatcaggcgtgagatt
atttctggattttatggcaatattgtcaaattaatgagtcacagtgtatcagcttctttt
gtagaactcacgtattctacttggtgtacaagtctcgagaagatatattttaagcaagaa
ttttttggggacatgtataaactggaaaaagacaaggaaattaaatcattgtcggatgta
ttcaaaactgcgatagatatgaaactggctacactatctgccataaaagcaaatctaatt
agaattttaaacaaaggttttgttaattctactctgctgcaaacgattctatgggaattc
ctctgcgtatgttcggtggaagataggaacgagttaatagttatgctgcgatcttacatt
ataactctgtcccaaacgaaaatgggcgtgagagttgctatgcaatgtatatggcatagt
actagcaaagataggaaaattattatgaaagccctcaaaggaaacgtaaaagcgatttgt
atgtccaaacacggtcacatgacattattggcgctctttgactccgtagacgacaccgtt
cttatgcagaagataatattgtccgaattacaagaggatctagttaacattgcgctaaat
gagtatgggaaacatgtcatattatatctcgtggccaggagaaaatctctttatttttcg
ccagctgtagtagaatatttacgccaaggtgataacaattccgctagtaagaagtcagcc
gatattagggaaaaggaactcctcgaagcaatctgtggtccgctttttgacgctataatc
gcgaatacagcaacatggttatgcaacagtagcatagttatgactaccttagcgatattg
aaagtgggatcgggagagaaattgaattttgcgtttgaatcgattgctaagtttattagc
agtacagattcaaaaatcaaggataatgatatcgaatacgatgtggttgaacatcctgga
ttacatacaatgttgaagaaacttattcagtatgacaaagaattgctgaaaaagaacgaa
tgtacatttggagaaatattaatatcacacctaacgccaaaagtgctagaaaagtggata
gaatttaatagggcttgtttcttattaattcttttcatagagaatgaaattgctataaat
atattactagttaaattaaaacctttaatagaaaatctcaagaaaaaacacagcgttgga
gcatcgatattgttaaaaaaattgacagaa
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