Atta colombica: 108688018
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Entry
108688018 CDS
T11098
Name
(RefSeq) cell differentiation protein RCD1 homolog isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
acoc Atta colombica
Pathway
acoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108688018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108688018
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108688018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
108688018
NCBI-ProteinID:
XP_018049570
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MILFQGYDMSTQQSPAALQSTVDREKVYTWIIELSNPETRENALLELSKKREVVPDLAPM
LWHSFGTTASLLQEIINIYPAINPATLTAYQSNRVCNALALLQCVASHPETRSAFLQVGL
XXFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGS
ELSKTVATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVLSLAKDPSARLLKHVVRC
YLRLSDNPRALLALRQCLPDQLRDNTFATCLQEDASTKHWLNLLLKNLEAGPQQPGPPTQ
PGQQDPRTIGMSPLTS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgattctattccagggttacgacatgagtactcagcagagtccagctgccctgcaatcc
actgtcgaccgtgagaaggtatatacatggataatcgagttatcgaatccagagacaaga
gagaatgctcttctggagttgagtaagaaacgtgaggtagtgcctgatctggcacccatg
ttgtggcactcgtttggcactacagcttctctccttcaggagatcattaacatttatcca
gcaatcaatcctgcgactctcacagcttatcaaagtaatcgggtttgtaatgccttggcg
ttgctacaatgcgtagccagccatccagaaacgagatctgcatttttacaggtagggtta
nnnnngttcttgtatccgtttctgcataccgtaagcaagacacgtccatttgaatacctt
cgcttgacaagtcttggtgtaattggtgcactggttaaaaccgatgagcaagaagtgatc
acctttcttctcactactgaaattatcccactttgtttacggattatggaaagcggctcg
gaattaagtaagactgtggcgacatttatattgcagaagatactgttagatgacagtggc
ctctcctatatctgtcagacttacgatagattcagtcatgttgccatgatattaggaaaa
atggttttatctttagccaaagatccttccgcaagattgcttaaacatgtagtacggtgt
tatttgagactctctgataatccaagagcactgttagctctaaggcaatgcttaccggat
cagctgagagataacacatttgcaacatgtctgcaagaagatgcctcaactaagcattgg
ttgaacttgcttcttaagaatctcgaggccggtccgcaacagccaggtccaccgactcag
ccaggtcaacaagatcctaggacgattggtatgtcgccacttacatcttaa
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