Atta colombica: 108688344
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Entry
108688344 CDS
T11098
Name
(RefSeq) PH and SEC7 domain-containing protein 1 isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
acoc Atta colombica
Pathway
acoc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108688344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoc04131
]
108688344
Membrane trafficking [BR:
acoc04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108688344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_9
Sec7
PH
PDZ
PDZ_6
PDZ_2
DUF6288
CoV_S1
Motif
Other DBs
NCBI-GeneID:
108688344
NCBI-ProteinID:
XP_018050060
LinkDB
All DBs
Position
Unknown
AA seq
1142 aa
AA seq
DB search
MAEEELLVTLCRGDSGSGGSFGFSLLGASASAGLPAAHVIYDIVENSPAARSGKVEAGDV
ILRVNEVDVNRFSTKEVLKCLRLSSDPVTLKLRRDPAVKAHVRRLLSPGQPMKDEGIESS
KDVLTNNPKNIASDNVEKKELKKTPITPEMSANSPTLTPTPATTTRSNGSCSDASLSSEL
EALLPPVDHFKEEERTQWEPLSAEKFSRQKNTPRFEAYMMTGDLMLNLSRTQQSSNLLPK
QHQQRKVDSLRYNPNHQHTTTTITTTSAHHNHNHHHHHHHHHHHHHNSVPSSPNETQLAH
QHHHHRGNVYKASSSASTSPVGAARRDGVQSTSGALVQVDPGKNTPSSFGFVRTSRSEDH
LQFQKDPSMSAVDIDIDDDVTSSLNTLLDPRPEGLMPNERIVWTYNAPVSSPAVSCCQNG
GSSSSSSSSSSSSTSPQRSLSPASPTSVSSSVMSSNSGSRRFPPAQTVPGVSSTPGGHLP
ANGDFSQSEAISNMSSPDYNDEETMDILSARDIMMVSDPSDSDSTILASEPPQRRLKANP
QDAGDHRIVIQVKGPDKEIPRNTSPRQARRRGNPIGELMPLAASQNLQRNQPGIPGVIAG
SVTPECVGYQELKESEDEREALIAGICDEQKGHGSGTSPPQSADEESDIESLHSFHYSPK
AVDLPSAIRLAKRLYSLDGFKKSDVSRHLSKNNDFSKAVAEEYLRYFNFERDTLDMALRK
FLAQFCLTGETQERERVLVHFSKRYLDCNPGSFNSQDAVHTLTCAIMLLNTDLHGQNIGR
KMSCSEFIENLSELNDGDNFPREVLKQLYNAIKSFPLEWALDEEGDEATNQAMQQGDGTA
AISGTGNPFLDVPNITGATEFKKGYVMRKCCYDSNGKKTPFGKRGWKMYYCTLRELVLYL
HKDEHGFRNDSLHNAIRIHHALATKATDYTKKQHVFRLQTADQAEYLFQTSDSKELQSWI
DTINFVCASFSCQPLAGAVGSQRKFQRPLLPCSHTKLNSREQLRDHEDRINRLETELDEH
RRHPPERGAKALTVQNYKEKDAYLHHELKRYKTYAYLLRSRLAFNEMESSLVESSIGEVD
EGTTLGPTGTVGNAEGALVPPPVPERPATTNRYSYRIAIHGGGGRKLNGGNQDCNAAGGD
VG
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggaggagctgctggtcaccctgtgccgcggcgactccggctccggcggctct
ttcggcttctcgttgctcggcgcctcggcgtcggcgggcctgccggccgcccacgtcatc
tacgacatcgtcgaaaactcaccggcggccaggagcggcaaggtcgaagctggtgatgtc
atactcagggtgaacgaagttgatgttaatcgattcagtacgaaagaagtactaaaatgt
ctacgactgtcttcagatcccgttactctgaaactgcgaagggatcctgcggtaaaggct
catgttcgtcgccttctttctcccggacaacctatgaaagatgagggcatagaatcttca
aaagatgttttgacaaacaatcccaagaacatcgcttccgacaatgtagagaaaaaggaa
ctcaagaagacgccgatcacaccagaaatgtctgcaaactcgccaacgttaacaccgacg
cctgcaacaacaacaaggagcaacggctcgtgcagcgatgcgtctctttcatcggaatta
gaggcactattgccacctgtggaccattttaaagaagaggaacgaactcaatgggagccc
ttatccgccgagaaattttcacgacagaaaaatacaccccgatttgaagcgtacatgatg
accggcgacctgatgctaaatctctctcgaacgcaacagagcagtaatttactgcctaag
cagcatcagcagcgaaaggtggattcccttaggtacaatcccaatcatcagcataccact
accactatcactaccactagtgcccatcataaccataatcatcatcatcatcatcatcat
catcatcatcatcatcacaactcggtacccagcagtcccaatgagacccaactggcacat
cagcatcatcaccatcgaggaaacgtctacaaagcttccagctcggccagtacatcaccc
gtaggcgctgctagacgcgacggagtgcaaagcacttcgggagcccttgtccaagttgat
ccaggcaagaacactccttcaagctttggttttgtacgtacttcgcgatcggaggaccat
ctgcagtttcaaaaagatccctcaatgagtgccgtggatatcgacatcgatgacgatgtc
acttcaagtctgaatacactattggatccgcggccagaaggcctaatgccaaacgagcga
attgtctggacttacaacgcgcctgttagctcaccggccgtttcctgttgccaaaacggc
ggttcctcatcttcgtcttcgtcctcatcatcctcttcgacgagccctcagcgttctctg
tcccctgcctcccctacctccgtctcgtcctccgttatgtcctccaactctggttcccgt
aggttccctccggcccaaactgttcccggggtttccagcaccccgggaggtcatctccct
gctaacggcgatttcagccagtcggaggccatcagcaacatgtccagtccagactacaat
gatgaagagacgatggatattcttagcgcgagggatattatgatggtaagcgatcccagt
gatagtgattccaccattttggcgagcgaaccaccgcaaagaagactgaaagctaatcct
caggatgctggagaccatagaatagtaattcaagtaaaagggcctgataaggagattcca
agaaataccagtcccagacaggcgaggagaagaggaaatcccattggggaactaatgccg
cttgctgcatcccaaaatttgcagagaaatcaacctgggattccaggagttattgcggga
tctgtaacacccgaatgtgtaggttatcaggaattaaaagagagtgaagacgagagggag
gccttgatcgctggaatatgtgatgaacagaaaggacatggaagtggcacgtcaccgccg
cagtcagcagatgaagaaagcgatatcgaaagcttgcacagtttccattatagtccgaaa
gcggtggatttgccctctgcaattcgactggccaaacgtctctattccttagatggtttt
aagaaatctgatgtctctagacatctaagcaaaaacaacgactttagcaaagctgtggca
gaagaatatctgcgttatttcaactttgaacgagacacattggacatggctctcagaaaa
tttctcgctcaattttgtctgacgggagagactcaagaaagagagagagtcttagtacat
ttctccaaaagatatttggattgcaatcctggtagttttaattctcaagatgctgttcac
acattgacttgcgcgataatgctgcttaatacagacttgcatggtcagaatattggcaga
aagatgtcatgctcagaattcattgagaatttgtcagagctcaatgatggcgacaacttt
ccacgcgaagtgctcaagcagctttacaacgccattaaatcctttcccctcgaatgggct
ttggacgaagaaggggatgaagcgacaaatcaagcgatgcagcaaggagatggtacggcg
gcgattagcggtactggaaatccatttcttgatgtgccaaatatcacgggcgctacagaa
tttaaaaagggttacgttatgcgtaaatgctgttatgactccaatggcaaaaaaactccg
ttcggtaaacgtggatggaaaatgtactattgtacattgcgcgagcttgtgctatacttg
cacaaagatgaacatggttttcgtaacgatagtttgcataacgctatacgtattcatcac
gcattggctaccaaagcgactgattacacaaagaagcagcatgtttttcgattgcagact
gccgatcaggctgagtatctctttcaaacaagtgattcgaaggagctgcaatcgtggatc
gatactatcaatttcgtatgcgccagcttttcgtgtcagcctctcgcaggcgccgttggg
tcgcagcgcaagttccagcgtccattgctgccatgtagtcacaccaaattaaattctaga
gaacagttgcgggaccatgaagacaggattaacagattagaaacggaattggacgagcat
agacgacatcctccggaaagaggcgccaaagctctcactgtacaaaattataaagaaaaa
gatgcatatttacatcacgagctgaagcggtataaaacatatgcctatcttctacgttcc
cgactggcgttcaatgaaatggaatcatcgcttgttgaaagcagtattggcgaggtagat
gagggtacgacacttggacctactggaactgtagggaacgcggaaggagctctagtacca
ccgccggtccccgaacgaccagccacaactaataggtacagttaccggatcgccattcac
ggcggcggtggccgcaagctaaacggtggcaatcaggactgtaatgctgccggtggtgat
gttggttga
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integrated database retrieval system
