Atta colombica: 108688404
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Entry
108688404 CDS
T11098
Name
(RefSeq) nuclear pore complex protein Nup160 homolog
KO
K14303
nuclear pore complex protein Nup160
Organism
acoc Atta colombica
Pathway
acoc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108688404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108688404
03036 Chromosome and associated proteins [BR:
acoc03036
]
108688404
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108688404
Chromosome and associated proteins [BR:
acoc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108688404
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
Pro_N
Motif
Other DBs
NCBI-GeneID:
108688404
NCBI-ProteinID:
XP_018050139
UniProt:
A0A195BB07
LinkDB
All DBs
Position
Unknown
AA seq
1379 aa
AA seq
DB search
MIEFPLGYREVVPDQALPEKWKEITLNTGGSQSTLQDIKVPERAGGYSYKDSSKYFTRNR
FIYWRICHDVLELVEHSLDINLANCRVRYKFTDTPILDGISIHETINSVIILIVTVSSVH
KLFFSHPDKIHNQENLLGTYTDLSVQSIFSEASVQNARDPHTFHIISNAGATNSPVPHAA
ASWLTLPQEEALFALAYSSATILLLRLDALTGLVHTSELKQDSIMPKFLSGIATAFRGRN
TEAYVAMSLVIHSYDSDTYLFALCREGNLRVWSCNKTQCVAVTDAATENRVVSQGAQGHV
LRKVLGNDDELYLGTFLKFGTGCEFSILKPVQDNGMFKFIRLCTLYAPDQHLVDFAFTPT
RLWAVWRTADMDAMAVTHAQLPLTHRIKPEWETAILEPARDSDYIATDEPGLDPREAYIN
YIFHPGMFSLADITKALSIYRRSNVVADMTFSPAVLKERVCMAVEAEMQAEVMDYVIMDE
DYLEIANRCWSKFYSCVVQYHANGTRPVGLLLLPSVYGVVLLKKSSFSFLRPMEALEHLV
LCNNKSYISRFKTTPILSQDEDTCQDLITLMSALVLLGEQLSEETKTEIERELYHLRSPD
IIIDDLLSKLLEPDDPLSDFDFQSELCHKLSHVKDISGAMAMLLEALTYDLGQPNKLQFE
DDHDTSKLLLNVNHLFGSQLGIATIAETITQIALLRFSICRDLLILQQLILLRPEIFNSR
SLHTIRSSLAPRTVVLTQAYYVVTWLCESTALYTPSQSLLESSSQRLSTLKLADSRINVG
QRQHRSLSLLELFIHSSGAKHAHILMAQANMDPTTLIPWHYSMLTHVTLIAQLIWPISGN
FIFPEWLLSSCQFLLVQEYVRLLNTWCEWNSASRKFILAVALLEMGEMQKACDHFLRASD
GILTDPFLVDALLNSNVTSRNRDLVYYYLKVIKLFEEHNASDCIIEIAETAITNADADDP
NLPTLHSIIFAQHLSLGHHAEAYHCLNANPDPVRRVDCLRQLVVTLFEKKLLIDLISFPY
IDMYEDLERIVEGRARSVDLMENNYYNFLYSFHINKQNMRKAASIMYEQAMRLSQEPHSA
PIIAKQAQCLLACINALHHVSEKYRWIVRPVIDQNISSEMNSSNLQKKRDIDGKEVLHYK
IKKQVEVLELDDIKKEYYIVDARLKISKINSELHIVAHTELSELIVTLCSIGLYATALHL
CDVFKISKASVLKSLTSQCIKLSQREDPNAWDWLIQNDIFDIGISNTTITNTAWRLLEYF
TLKHEKSDNCELHKAVAQKLLQDGVFLPQWLLISYKKRNASELLRLMLNTGRLVEASDLA
IDYINAVLGSGKEHFGLETPLVATAPPVWLPLNTIEVLLSELRHLKDDSAHAEVKYIYF
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgatagagttcccgctgggatatcgtgaagtcgtgccggatcaagctctgccagagaaa
tggaaagagatcactctgaacacaggcggaagccaaagtacattgcaagatataaaagta
ccagagagagcaggtggctactcatacaaagattcttcaaagtatttcactcgtaatcgc
tttatttattggcgcatttgccatgatgtacttgaattagtggaacatagtttggacatt
aatcttgccaactgtcgagtgagatacaaatttacagacactccaattctagatggaatt
tctattcatgagacaatcaattctgtcattatcttgattgtcactgtttccagtgtccac
aagcttttcttttctcacccggataaaattcataatcaagaaaatctattgggaacatat
actgatctcagtgtacaatctatatttagcgaagcttctgtacaaaatgctagagatcct
catacatttcatattatttctaacgctggagccacaaactccccagtgcctcatgcagca
gcgtcatggcttacgttgccacaggaagaggcactgtttgcccttgcatacagttcagcc
actatattactcttgagactcgatgcacttacaggtctcgtgcacaccagtgaactgaaa
caagattcgataatgcccaaatttttaagtggcatagccactgcctttagaggtcgtaat
accgaagcttacgtggctatgtctcttgttatacatagttacgatagcgatacatatcta
tttgcattatgtcgagagggcaatctacgtgtatggtcttgcaacaagacacaatgcgta
gctgtaacagatgcagctactgagaatcgtgttgtatctcaaggtgcacaaggtcacgtc
ttacggaaagtgctgggcaacgatgacgaattgtatcttggaactttcttaaaatttggc
acgggatgtgaattcagcattctgaagcctgtgcaggacaacggcatgttcaaatttatt
agattatgtacattatatgctccagaccaacatttggtagattttgcatttacgccaact
agattgtgggcagtgtggagaactgcggacatggatgcgatggcagtgacgcatgcacaa
ttaccgttaacgcatcgcattaaaccagaatgggaaactgcaattttagaaccagcgcgt
gacagtgattatattgcaactgatgaacctggactagatccaagagaggcatacattaat
tacatttttcatcctggaatgttttcgttggcagacatcacgaaagctctcagcatctac
aggagatccaatgttgtagcagatatgactttttcaccagccgttttaaaagaaagagta
tgtatggctgtagaggctgaaatgcaggcagaagtgatggattacgtgattatggatgaa
gattatctcgaaatcgctaatcgatgttggtcgaaattctattcatgcgtcgtccaatat
cacgccaatggtactcgtcctgtaggtctacttctattaccgagcgtttacggcgttgtg
ttattgaagaagtcctcgttctcatttttgagacctatggaagctttagaacatctggtg
ctttgcaacaataaatcctatatttctcgattcaagacaacgcccattctatcgcaagat
gaagacacatgtcaagatctaattacattaatgtccgcgttagtcttgttaggagaacag
ttatctgaagaaactaaaacggaaatcgagagagaattgtatcatttaagaagtccagat
atcataattgatgatttgctatcaaaactgttagaacctgacgatccactgtcggatttt
gacttccaatcagaactctgtcataaactgagtcatgttaaagatatatcaggagctatg
gccatgttgttggaagctttaacatatgatcttgggcagccaaataaattgcaatttgaa
gatgaccatgatacttcgaaacttttgttaaatgtcaatcatttatttggcagtcagcta
ggaattgccacgatagcggaaaccataacacaaatagcgcttctgagattttccatttgc
agggatttattgatactgcaacaactcatactacttcgtcctgagatatttaattcgaga
tctttacatactataagatcatcgttagcaccgagaaccgttgtacttactcaagcttac
tatgtcgttacatggctatgcgaatcgacagcattgtacacaccttcacaatcattactc
gaatccagttctcaacgtctttcaactcttaaactcgctgattcgcgaattaatgttgga
cagaggcaacatcgatctctctcactattagaattgtttattcatagcagcggtgcaaaa
cacgctcatattttgatggctcaagcgaacatggacccaacaactctgataccttggcac
tacagtatgctaacgcatgtgacgcttatcgcgcaacttatatggccgatatctggaaat
tttatcttccctgaatggctactctccagttgccaattcctgcttgttcaagaatatgtg
agacttctgaatacatggtgcgagtggaatagcgcttcgaggaaatttatattagcagtt
gccttattagaaatgggagagatgcaaaaggcatgcgatcattttcttcgtgcttccgac
gggatattgactgatccgtttttagtagatgccttactcaattctaacgtgacatcgaga
aatagggatttggtttattattatctgaaagttatcaaattatttgaggagcacaatgcg
tccgactgtatcatagaaatcgctgaaacggccataacaaatgcggatgcagatgatccg
aatttgccgacacttcattccataatattcgcacaacatttaagtttaggtcatcacgcg
gaagcttatcattgcttgaacgcgaatccagatcctgtacgcagagtggactgcttacgg
caattagttgttacgttgttcgaaaaaaaattgttgatagatttaatttcttttccttat
atcgatatgtatgaggatctcgagagaatagtagaaggcagagccagaagcgttgatctt
atggaaaacaattattataattttttatatagtttccatatcaataagcaaaacatgcgg
aaagccgcatctataatgtacgaacaagctatgcgtttgagtcaagaacctcactctgca
ccaattatagcgaagcaagcacaatgtctactagcgtgcattaatgctttacatcatgta
agtgaaaagtacaggtggatcgtaaggcctgtaattgatcagaatatctctagcgaaatg
aactcgtcgaatctacaaaagaaaagagatattgatggtaaagaggttttgcattataag
ataaaaaaacaagtcgaagtactcgaactggatgatatcaaaaaggagtattatatagta
gatgcaagattaaaaatatcgaaaataaattcagaattgcatatagttgcacatactgaa
ctttccgaacttatcgtcactttatgtagcattggcttatacgcaacagcgttacattta
tgcgatgtatttaaaattagtaaagcctctgtactcaaaagtttgacttctcaatgcatc
aaattgagtcaacgcgaggatccaaacgcctgggattggctaatacaaaatgatatattc
gatattggaatatctaatacaaccattacaaatactgcttggagattgttagagtacttc
acattgaagcacgaaaaaagtgataattgcgaattacataaggccgttgcacaaaaatta
ttgcaagatggagtttttctaccacaatggttattaatatcttataaaaagcgaaatgcg
tcagagcttctccgtctcatgctaaatactggtcgattagtggaagccagcgacttagcg
atagattacattaacgcggtattaggtagcggtaaagaacattttggtcttgaaacacca
ttagtagctaccgcgccacctgtttggttaccgcttaatactatagaagtattattaagt
gaattacggcacttgaaagatgactcagctcatgcagaggtaaagtatatatatttttaa
DBGET
integrated database retrieval system
