Atta colombica: 108688435
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Entry
108688435 CDS
T11098
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoc03036
]
108688435
Enzymes [BR:
acoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
108688435
Chromosome and associated proteins [BR:
acoc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108688435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
TUDOR
Helicase_C
Motif
Other DBs
NCBI-GeneID:
108688435
NCBI-ProteinID:
XP_018050180
LinkDB
All DBs
Position
Unknown
AA seq
999 aa
AA seq
DB search
MKFHKHQVLDIPATAKAIKIRNVKNPYCMRAYEVEKHAETLCKIEKRLLNFMKTNEFLKR
ESNAEDAQIGDMVLIQDSFKAEIELSSCVCRGLITCIKKEYEMYYIILLVDHGISIELTR
DKFHILPKNLIPDKYLTKTVGVYDIIPICMRKSTILNGCNTIAVVAEKWTEKAIQFTKHL
LSACKMIYFDHLITNKSNGIEYGEFYFVIDKIVMSLSEALFLNYYAVYIEGELLKLVETH
SQLKEKRWYILYVKFSRNKEKRYNVTRIKGTNNIHTNFFLSEKILVQSSIDCDILSDITD
LRYPKGIHEGWDENIKSSRPRKLQSYIWPAINNGLNVVAIGSTQCGKTSGCVMAVCGQIA
LRLHEIRTGTQPLALILCASSYEVISVQSLCESFLRTFTNIKCVAAFNGKSDRSVAAMIY
NGCQILVTTPRYLVRFLNKNKGILSFDRLSCLILDNVDVILDKYYNSVGELFKKHKIIEN
REPQQNDRPILQIIISATHWTPEIKKFVHLVMYNPYICIASFIEAMVFKSVKSLKLYHVN
TGYKNQKLFDLMSKNEYLMMRTAIICTNAEEAENLNTFLILTKKTLLIHDKMKSSAIRTL
RENWMACICGSYPVLICTDPVLSDLNFTNIQWLIHFSVLSKLKNQFNYRFSLLLDNLTED
SSNCKISIIVDENDTIQLLSIVKIMQRMNIVIRPKIFDYIQRKALELERNKKVYALCDNV
KSFGFCQTRNVCVFRHCVLSEIDAPITNIQIGDKVKLIVTYIHDTTHFSARILEHIPRSN
ESEKITFSNIEYMQNTSKIQSYYGNIENRKMSTSTNIGDICVLEETIDTFKRIQITRIRY
DRDYAEDEIFVDVRCIDSGIVHEYINVCKLMHIPKELLDLPTHVVEIFLANLIPWDEEYM
WNHYTNEQVHKWFSENFDERSYIIGEVRLHLGNTIWLDDLKIGTKLIGHPDLIGSSLKKE
LCHGNFSIVNNNHLSNLFKLCRNSGMTEINGHNLNATDK
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttcataagcatcaagttttagatattcctgctacagctaaggcaataaaaata
agaaatgtaaaaaatccatattgcatgagagcttatgaagttgaaaaacatgcagaaaca
ctctgtaagattgaaaaaaggttattaaattttatgaaaacaaatgaatttttgaagaga
gaatctaatgcagaagatgctcaaattggtgacatggttcttatacaagatagttttaaa
gctgagatagaattatcatcatgtgtttgtcgaggtttgataacttgtattaaaaaagag
tatgagatgtattatataattcttttagtggatcatggaattagtattgaattaactagg
gataaatttcatatacttccgaaaaatcttatccctgataaatatttaacgaaaactgtt
ggtgtatatgatattataccgatttgtatgagaaaaagcactattttaaatggttgcaat
actatagcagttgttgcagaaaaatggaccgagaaagcaattcaatttacaaaacatctt
ctcagtgcatgtaaaatgatatactttgatcatttaatcacaaacaaaagtaatggaata
gaatacggagagttctattttgtcattgataaaattgtcatgtcattgagtgaagcttta
tttcttaattattatgcagtttacatagaaggagaattattaaaactagttgaaacacac
tcacaacttaaagaaaaacgatggtacattttatatgtaaaattttcaaggaataaagaa
aaaaggtataatgtaacacgcatcaaaggaactaataatattcacacaaacttctttctc
agtgagaagattttagtacagagctcaatagactgtgacatcttaagtgatattacagac
ctcagatatcccaaaggaatacatgagggttgggatgagaacattaaatcttccagacca
agaaaacttcagtcttatatatggccagctataaacaatggattaaacgttgttgctatt
ggatcaacacagtgtggtaaaacgagcggatgcgtaatggctgtttgcggtcaaatagct
ttgcgtctacatgaaatacgtactggaactcagccgttagcattgattttatgtgcctcg
tcttatgaagtaatttccgttcaatctttgtgcgagtcatttctgcgaacttttactaat
ataaaatgtgttgctgcatttaatggcaaatcggatagatcagtagcggcaatgatatat
aatggttgtcaaattttagtgactacaccgcgatatctagtcagattcttaaataaaaat
aaaggtatattgtcatttgaccgactttcttgtttaatacttgacaatgttgatgtaatt
ttggataaatattacaattcggtaggagaacttttcaaaaagcacaagataatcgagaat
cgtgaaccacaacaaaatgatagaccaatattgcagataattatatcggcaacacactgg
acgcccgagattaagaaatttgtacatctagtgatgtataatccatatatatgcattgcg
tcatttatagaagctatggtttttaaatctgtaaaatctctaaaactgtaccatgtaaat
actggatacaagaatcaaaaattattcgatctaatgtcaaaaaatgagtaccttatgatg
agaacagcgataatatgtacgaacgccgaagaagctgaaaacttaaatacctttttaatt
ttgacaaagaaaactctgctaattcatgacaaaatgaaatcatctgctatacgaacttta
cgagaaaattggatggcatgtatttgtggttcctatccagtactgatatgtactgatcca
gtcctatctgatctgaattttactaatattcagtggctaatacatttttctgtattatca
aaattaaaaaatcaattcaattataggttttctttacttttagataatttaacggaggat
tcatctaactgtaaaattagtattattgttgacgagaacgatactatacaattactaagt
atagtaaaaataatgcaacgaatgaacattgtaatacgaccgaaaatatttgactacatt
cagcgaaaggctcttgaattagagagaaataagaaagtatatgctctatgtgataatgta
aaatcatttggcttctgccaaacacgaaatgtctgtgtatttagacattgtgtcctttct
gaaattgatgcaccaataacaaatatacagataggggataaagtgaagttgatagtgaca
tatattcacgatacgacgcatttttctgcaagaattcttgaacatattccacgttctaat
gaatcagaaaaaataacattttccaacatagagtatatgcaaaatacgagtaaaatacaa
agttattatggaaatatcgaaaacaggaaaatgtctacttcgacgaatataggagatatc
tgcgttttagaggaaactatcgatacatttaaacgaatacaaattacacgcatcagatat
gacagagattatgctgaagatgaaatatttgtagatgtaagatgtatcgacagtggtatt
gtacatgaatacattaatgtatgtaaactaatgcacatcccaaaggaattattagatctc
ccaacacatgttgtcgaaatatttttagctaatttaattccttgggatgaggaatatatg
tggaatcattatactaatgaacaggtgcacaagtggttttcagaaaatttcgatgaaagg
tcttatattatcggagaagttcgccttcatcttggaaatacaatatggttagatgattta
aaaataggaacaaagttaattggccatcccgatctaataggatcctctttaaaaaaagaa
ttatgccatgggaatttttcaattgtgaacaacaatcacttatcaaatttatttaaactt
tgtagaaatagtggaatgacagaaatcaatggtcataatctaaatgctacagataaataa
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