KEGG   Atta colombica: 108688506
Entry
108688506         CDS       T11098                                 
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
acoc  Atta colombica
Brite
KEGG Orthology (KO) [BR:acoc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:acoc04131]
    108688506
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:acoc04147]
    108688506
Membrane trafficking [BR:acoc04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    108688506
Exosome [BR:acoc04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   108688506
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_HPS5 NBCH_WD40 Beta-prop_SPT8 WDR90_beta-prop_4th PEP5_VPS11_N Beta-prop_SCAP WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st HEAT_GCN1
Other DBs
NCBI-GeneID: 108688506
NCBI-ProteinID: XP_018050291
LinkDB
Position
Unknown
AA seq 941 aa
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLCSLYQGHVNIWNHETQTLVKTFEVCDLPV
RTAKFVPRKNWVITGSDDMQIRIFNYNTLERVHSFEAHSDYVRCIAVHPTQPFILTSSDD
MWIKLWNWEKSWICQQVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSSTANFT
LEGHEKGVNCVDYYHGGDKPYLISGADDRYVKIWDYQNKTCVQTLGGHTQNISAVCFHPE
LPIFLTASEDGTVRIWHAGMYRLESSLNYGFERVWTIACMRGSNNVAIGYDEGSVMVKVG
REEPAVSMDSLGGKIVWARHSEIQQVNLKALGEEAQDGERLPLAVKDMGACEIYPQTIQH
NPNGRFLVVCGDGEYIIYTSMALRNKAFGQASEFVWAADSSQYAVREGNTTVKVFKNFKE
KKSFKPDFGADGIFGGFLLGVSSGSGLCFFDWDTLKLIRRIDIQPTHVYWAENASLVALA
TSDQYFILKYHADVVANATENSEDIENAFEMVAEMNEVVKTGLWVGDCFIYTNSVNRINY
FVGGEVVTVSHLDRPMYLLGYVPRDNRLYLCDKELSVVSYSLLLSVLEYQTAVMRKDFET
ANRVLPTVPKEHRTRVAHFLEKQGFKEQALAVSTDPEHRFELALALGNLATAHTLAKEAN
SQQKWRQLASLATQKGKLCLAQECLHQAQDFGGLLLLATSTGNSDMIQKLGAVADDTGKN
NISFLSNFILGDVDKCLDILIKTDRIPEAAFFARTYAPSKISAIIKLWKEKLSAVSEKAG
QSLADPEQYENLFPGYREALKVEKFLREESKKKIPASAFPTVTPNIERKPLEEMFAAEQS
GAFQYKDNRNCTSETEEKTTEAMIDRLQDLSISAIKDSLFLNKATTSTVKSEVPEKATTK
PMSSSRPLTVDDDDLDIDLEIDDNIDTTGVNLDDDLLEEED
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgcctttaagattagacatcaagcggaagctgacggccagatcagacagagtgaagagt
gtggatctccatccaactgagccatggatgctctgctcactataccaaggccatgtcaat
atctggaaccatgaaacacagaccttggtgaagacatttgaggtatgtgacctgccggta
cggacagcgaagttcgtgccacgtaagaactgggttatcactggctccgatgacatgcag
atcagaatatttaattataacactttggaacgtgttcactcatttgaggcgcacagtgat
tatgtcagatgtatagccgtgcatccgacgcagccgttcatacttacaagtagtgatgat
atgtggataaaattatggaattgggagaagtcctggatctgccaacaagtatttgaggga
cacactcactatgtcatgcagattgtatttaatccaaaggacaacaatacttttgccagt
gcttcccttgacagaaccgtcaaagtgtggcagcttggttcgtccacagctaattttacc
ttggaaggtcacgagaaaggtgttaattgtgtggattattaccacggtggcgacaaaccg
tatctaatctcaggagctgatgacagatacgtcaagatatgggattatcaaaacaagacc
tgcgtacagactttaggaggccacacccaaaatatttctgctgtatgtttccatccagaa
ttgccaatctttctcacagcctcagaggatggtactgttagaatatggcatgcaggaatg
tatagattagagtcttctcttaattatggctttgagagagtatggaccatagcatgcatg
cgaggttcaaacaacgttgccattggatatgacgaaggtagcgttatggttaaagtcggt
cgagaagaaccagctgtttcgatggattcattgggtggcaagattgtatgggcacgtcat
agcgaaatccagcaggtgaacttaaaggcgttgggcgaggaggcacaagatggagaacga
ctaccgttagccgtcaaagacatgggtgcttgcgaaatatatccacagaccatacagcac
aatccgaacgggcgattcctggtggtttgtggcgatggagaatacattatatacacatca
atggcgttgagaaacaaagcatttggacaagcgtcggaatttgtgtgggcagcagattca
agccaatatgcagtaagggaggggaacacgacggtaaaagtcttcaaaaacttcaaggag
aagaaaagctttaagccagatttcggagcggatggcatctttggtggatttttacttggc
gtctcatccgggtccggtctctgcttctttgattgggatacgttaaaattgatccgtcgc
atagacatacaacctacgcacgtatattgggccgaaaatgcctcgctggtggcattagcc
acgtcagaccaatattttattctgaaatatcacgcggacgttgtcgctaatgccacagaa
aactctgaggatattgaaaatgcgttcgaaatggtagcagaaatgaatgaagtggtgaaa
actggcttgtgggtcggagactgtttcatctataccaacagcgtcaatcgtattaattat
tttgtgggcggcgaagtggtcactgtctcccatctggatagaccaatgtacttgctagga
tatgtaccaagagacaacagattatatctttgcgataaagaattgtctgtagtctcgtat
tctttgctattgtcagtgctagagtatcagaccgcagtcatgcgaaaagatttcgaaact
gccaatagagtattgccgactgtcccaaaggaacatcgaacgcgagtagctcacttttta
gaaaagcagggtttcaaagaacaagctttggcggtgtcaacggatcccgagcacagattc
gagctagcacttgcgttaggaaatctcgcaactgcacacactcttgctaaagaagctaac
agccagcagaagtggcggcaattggcgtccctcgccacacaaaaagggaaactttgtttg
gcgcaagaatgtctgcatcaagcgcaagattttggtggtctgttgttactagctaccagc
acaggaaattcagatatgatacaaaagcttggcgcagtggcggacgatacgggaaagaat
aatatctcctttctatcgaactttatattgggcgatgtggataaatgtctcgatatttta
atcaagactgacagaattcccgaggccgcgttctttgccaggacatatgcacccagtaaa
atctctgccattatcaaattgtggaaggaaaaactctcagcggtaagcgaaaaagccgga
cagagtttggcggatcctgaacagtacgagaatcttttccccggatacagagaagccttg
aaggtggaaaagtttttacgagaagaaagcaagaaaaaaattccagcttctgcatttcct
accgttacgccaaatatcgagcgaaagccgttggaggagatgttcgccgccgagcagtcg
ggcgcatttcaatacaaggacaacagaaactgtacttccgagaccgaggagaagacaact
gaagcgatgatcgacagattgcaagatctttcaatatcagcaataaaggacagccttttc
ttaaacaaagcaaccacatctaccgtgaaatcagaagtacctgaaaaagcaacgacgaag
cccatgagtagttccaggcctctcacagtggatgacgatgatctagacatcgatcttgaa
atcgacgataatatcgatactacaggtgtcaatctcgatgatgatcttctcgaagaagaa
gattaa

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