Atta colombica: 108688543
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Entry
108688543 CDS
T11098
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
acoc Atta colombica
Pathway
acoc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108688543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoc03000
]
108688543
03021 Transcription machinery [BR:
acoc03021
]
108688543
03036 Chromosome and associated proteins [BR:
acoc03036
]
108688543
Transcription factors [BR:
acoc03000
]
Eukaryotic type
Helix-turn-helix
ARID
108688543
Transcription machinery [BR:
acoc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108688543
Chromosome and associated proteins [BR:
acoc03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
108688543
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
BAF250_C
SporV_AA
Motif
Other DBs
NCBI-GeneID:
108688543
NCBI-ProteinID:
XP_018050333
LinkDB
All DBs
Position
Unknown
AA seq
1883 aa
AA seq
DB search
MAKILNKDPVTYEKERDNFLKDLRHFHETRGTLFKKSPKINGKDIDLYLLYVVVTAHGGW
IKVNTRNEWASLCEQFHLPGGCINSGVGLKQIYLRYLDRYEKVHFLGEDGQQADDDDEDS
RHRKWSARALHSVPLTYNHHQHNIAESLRDYNGLSSDLYKSSNYDKLALSLLSPLPNEQD
FAINVCTLLSNEGKHTLRLDKYPRLVNILLAHAGVFDSPGTRQLFIEVYSRIRNYSINSF
WSDVLDSQDVIDLTDERTFMKKPPTNSLPTFSRRKIVEKEKQSKQDIIALTTENEESTVP
NDVEVILPDCPRLDLLVLHSDENLKDQNQNSIKFEEEDKDLFCVGRTLGTQDPYGQRVLQ
IASILRNLSFTPENATVLGRNRCFLRFVLLCVRARWSNLHQLGFDILGNIANEVILKEAG
ERITNVVLMCVAKGIESQDRFIVISCLEVLNKISQQDSNEEIVTFGLADNVYELICRFLA
LSDIALLVYTLECLYALTSLGERPCTSVARVRGAIDTLVALVTVEAQSYGPKACILMRVV
ETVSTVAAQQNTTGQSSVPASPATPATTTASASTPSTPATITTTPAPASPASSRPTTPAA
TSTKSTTHKVVETANAIQQQNAHQQIIQENEQFALGWVKATFELTPGVRIEQEELYKKYL
GCCTKIGRRGVIAPLHFPRCVRSVFGNIVGPNPLKGENTGTQYYEGIRVRATPAPITYPS
QTTAAVATNTSLIPAINTTPVKVLPVQQRTVKNISPAPDSTAVSQVDNPAASSGTQTTST
PASPILKAQLSAPPKPPSNNTSSQSQNPVTKVDSKSQVSVSHPHLSQALLASGSQTPPQQ
PQPQPQLQCVQVVAKEDNRSGTTSSSIIKSLLATKVTVSSDCMPSAAATCVSTPTACVTN
TTASIASSISANQLITSNQVAQRQQQQRLLQQQMTSIIQPAAPAATPATILPKTLINTKQ
KPTIAPIPAKKIQRLNGAKFVVTNNCEKTEINDNDNTNQIITSTTTVINPTENHISSPAK
VCRPPLTTVNLATATLNKTNQRMTCTSIAEDSDSTNNSLASSSGIGGSRDCSFRVEEENM
PTSFEGILLNGAPTSNNMDIDAQEDGSSKDSSSVSSKDKPLQSMMLVDLLERKVDKEPIL
NGVLSKNSINEKEMDLVENHIKKVLKESPAEMKIKSEIESGNVIQNEVSEDTLIEAPRGI
KRSASESDELDIKKPKYSNGTMSPDPAVDSTTAESTVSSIKSEEQDDDKDSEKVTVSSTA
ANLYAALAADCIEDEIDLEEQMNINKDTIKEEASATAIPTTATVTGSAITTATATVSMVA
TATVAMPATATMAVATASSTSLPPPLHVKTETTPVLVKEEPPTLHIKEESHIFINQIASM
NQASQPQPPSLQQQQQQLIVTTPRQIVVQQTIPSSNQVIIPTTSVKGRQPSQQPQVLLQQ
SAGGQLQYVVSGGVPGQNYVLAQPQTALVQGQAQTVLVAQTTQQQGTGTKTIIILQPQAT
AQPTPQKMVAMTPQGQQVVVTQVPRPILQSPALGNIPPPLVPTSATIPQASIIVNSSIAQ
TNPNTVTVTIPAMAQQTPVSTSVPSRVVTPTPASTPPPTRPTTPHQAAATHGVSTVKSSP
ATKIVKTVSSSTSTEPESKPSTSQQQQQQQTPQLMQENKTITIKIDPNAYLCEWRGCLRQ
FKTPHEVYLHVCEAHCPSGGEEILCLWASCDALKRRKFSLMTHLYDRHCNADTMSMRRKQ
LTVTGKTEVSTSTPPTPHHPGYAPNAAFHAIKRHALEFVNPKELMQQRPTKPAAATSSSS
SPRPGQNSPPEQDDNEGPVTKSIRLTAALILRNLVIYSTHGRRHLRAYEPHLAGVALSNV
ESSRTIAQVLYDMNDQSSSSHHR
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcctcaacaaggaccctgtcacatacgagaaggagagagacaacttcctc
aaggacctccgacacttccacgagactcgagggactctcttcaagaagtctccaaagata
aatgggaaagatatagatctgtatttactatacgtggtagtgaccgctcatggaggatgg
attaaagtcaatactagaaatgaatgggcgtcattgtgcgaacagtttcacctacccggt
ggttgcatcaatagcggagtcggccttaaacaaatttatcttcggtatctggacaggtac
gagaaagtccacttcctaggcgaagatggtcaacaagccgatgacgatgatgaggactcc
aggcatcgaaaatggtcggccagagcactgcactccgttcctcttacttataaccatcat
cagcacaacatcgcagaatcactgcgtgattataatggactttcatcggacctttacaaa
tcctcgaattatgacaagcttgcgttgtcgctcctgtcaccgctgccgaacgagcaggac
tttgccatcaatgtctgcacccttctgtcgaatgagggtaaacacaccctgcggctcgac
aagtatcctcgtctggtgaacatcctcttggcgcacgccggtgtctttgactctcctggc
acgcggcaactcttcatcgaggtgtactcgcgtattcgtaattattccattaattccttt
tggtcggacgtactcgattcccaggatgtgatagatctcacggacgagaggactttcatg
aaaaagccgcccaccaatagtctgccgacgttttctaggcggaagattgttgagaaggag
aagcagagcaaacaagatattattgcattgacaacagagaacgaggaatcgacggtgccg
aatgatgtcgaagtgatacttccagattgcccacggctagatttacttgtcttgcactcg
gacgagaatctaaaagatcagaatcagaattctatcaagttcgaggaggaagacaaggat
ctgttttgcgtcggtcggacattaggtacacaggatccgtacgggcaacgcgtgctgcaa
atcgcctcgatcctacggaatcttagctttacgccagagaacgcgacggtattaggcagg
aaccggtgtttcctgcgattcgtgctgctgtgcgtgagagcgaggtggagcaatttgcat
cagctcggcttcgacatactagggaacatagcgaacgaagttattttaaaggaagctggc
gagaggataacgaacgttgtcctaatgtgtgtggctaagggaattgagtcccaggacagg
tttattgttatatcctgtctggaggtgctcaacaagattagtcaacaagatagtaacgaa
gaaattgtcacatttggtctggcagacaatgtatatgaacttatatgcagatttctagct
ctaagtgacatagccctcttagtgtatactttggaatgtctgtacgctttaacgtcgctg
ggtgagagaccatgcacgagcgtcgcgcgggtccgcggtgccatcgatacgttggtcgcc
ctcgtcactgtggaggcgcagagttacggcccgaaagcttgtattctcatgcgagttgtt
gagacagtgtcgacagtagcagcacagcagaacactacaggtcaaagttctgtccccgcc
tctcctgccacaccagccacgacgactgcgtccgcgtccactccgtctacgccggcaacg
attaccacaacaccagcacctgccagtccagcatcttctcgacctacgactcccgccgcg
acctcgaccaaatcgacaacgcacaaagtagtggagacagctaacgcgattcaacaacaa
aatgcgcatcagcagattattcaagagaacgaacaattcgctctaggctgggtgaaagcg
acttttgaactcacacccggtgtacgcattgaacaggaggaattgtataaaaagtatctt
ggctgctgcacgaagatcggtagacgaggcgtgatagcaccactgcattttcccagatgc
gtcagatccgttttcggcaatattgtggggccgaatccgttgaagggcgaaaataccggt
acccagtattacgaaggcatccgagtacgggccacacccgcaccgatcacttatccgagc
caaactaccgctgctgtcgcgactaatacatcactgattccggcgatcaacactactcca
gtaaaggtgcttcccgttcaacagcgtacagtcaagaatataagtcccgcacccgatagc
acggccgtttcccaggtcgataatcccgccgcgtcgtccgggacgcaaacgacctccact
cccgcgtctcccatcctcaaggcccaattgtccgcaccgccgaaacccccgtccaacaac
acctcgagtcagtcccaaaatccagtgaccaaggttgattctaaaagtcaggtatcagta
tcgcatccgcatctgagtcaagcgttactagcaagcggctcccaaacgccgccgcagcag
ccgcaaccgcagccacagttacaatgtgtccaggtagttgctaaagaagataatcgaagt
ggcactacgtcgagttccataataaaaagcctattggctactaaggtaacagtcagcagc
gactgcatgcccagtgctgctgcgacttgtgtgtctacccctactgcctgcgtaacaaac
actactgctagcatcgcatccagcatcagtgccaatcagctaataaccagcaaccaggtt
gcccaacgtcaacaacaacagagattattacagcaacagatgacgagtataatacagccc
gctgcacccgcggccactccggccacaatactcccaaagactctcatcaacactaagcag
aaaccgacaatcgcacccattcctgccaaaaagatacaaaggctcaatggggccaaattc
gttgtcactaataactgtgagaagactgagataaacgataacgataataccaatcaaatt
atcacgtccacgactacggtgataaatccgactgaaaaccacatatcctcaccggcaaag
gtctgtcgtccgcccttgacgacagtcaacctcgccaccgctacactgaacaaaacaaat
caacgcatgacatgcacttccatcgccgaagattcggactctaccaataactctttagca
tcgagcagcggtatcggtggtagtagagactgttccttcagagtggaagaggagaatatg
ccgacaagtttcgaaggtattctacttaacggcgcgccgacaagcaacaatatggatatc
gatgcgcaggaggatggctcatccaaagattcatcgagcgtgagctcgaaagacaagcca
ttacagagtatgatgttggtggacttgctcgagaggaaggttgataaagaaccgattctg
aatggcgttctcagcaagaattcaattaatgagaaagagatggatttggtggagaatcat
atcaagaaggtattaaaagaatctcccgccgaaatgaaaataaagtccgagatagagagc
ggcaatgttatacagaacgaagtgtccgaggatactctaatcgaggcgccacgaggaatc
aagagatcagctagtgagtcagatgagctagatatcaaaaagccaaagtattccaatggc
acaatgtctcctgatccagcggtcgattcgaccacagcagaatctacggtatcaagtata
aaatccgaggagcaggatgacgataaggatagcgaaaaagtaactgtttcttccactgcg
gcgaatttgtatgctgctctggcagcagactgcatagaagatgaaatcgatttggaagaa
caaatgaacattaacaaggatacaataaaggaagaagcatcagcgacggcgataccgaca
acagcgacggtaacaggatcggcaataacgacagcaacggcaacagtatcgatggtagcg
acggcgacggtggcgatgccagcaacagcaacgatggcagtggcaacggcgtcttcaact
tctcttcctcctcctcttcatgtaaagacggaaacgacgccagttcttgtgaaagaggag
ccaccgactctacacatcaaggaagaatctcatatattcatcaatcaaattgcaagtatg
aatcaagcgtcgcaaccgcaaccaccatcgcttcagcaacaacagcaacaacttatagtt
acaacgcctaggcaaatagtcgtgcagcaaacgatcccgtcgagcaatcaagtgattatt
cctaccacgtcggtaaagggcaggcagccttcacaacaaccgcaagtactcttacagcag
agcgcgggcggacagctgcaatatgtagtatcaggcggtgtacctggtcaaaactatgta
ttggcacaaccacagacggccttggtgcagggtcaagcgcaaaccgtccttgtggcacag
acaacacagcaacaggggactggtactaagacaattatcatattgcaaccgcaggccact
gcgcaaccgacccctcaaaagatggtggcaatgacgccacaaggacagcaggtggtcgtg
acacaagttcctcgtccgattctacagagtccggcgcttggcaacattccgccacctctt
gtacccacatccgccactatcccgcaagcctccattatagtcaacagctcgatagcgcag
actaatccaaacactgtgactgtcacaatcccagcgatggcccaacaaactccagtatcc
accagcgtgccgtccagagtggtgacgcctactccggcgtctacgccgccgcctactagg
cccacaactccgcatcaagcagcggctactcatggtgtgtctactgtcaaatcgtcacct
gctaccaagatcgtgaagacggtaagttcatcgacctccaccgagcctgagtcgaaaccc
tctacaagccaacaacagcagcaacagcagacgccacagctaatgcaggagaacaaaacc
attacaattaaaattgatcctaacgcttacctgtgcgagtggcggggctgtcttagacaa
tttaaaacaccgcatgaagtttatcttcacgtttgcgaagcccactgtccgagtggtggt
gaggaaatattgtgtctgtgggcgagttgtgacgctctcaagagacgcaagttttcgtta
atgacgcatctctatgataggcattgtaacgcggacacaatgtcaatgagaaggaaacaa
ttaacagtgacgggtaaaactgaagtctctacgtctacgcctccgactccgcatcatcct
ggatacgcacccaacgcggcattccatgctattaaacggcatgctctggaattcgttaat
cctaaagagctaatgcagcaaaggccaaccaagcccgctgcagccacttcaagctcttct
tcccccagacctgggcaaaattctccaccagaacaggatgacaacgaaggtccagtgacc
aaaagtattcgcctaacggcagctctcattcttagaaacctagtcatatactcaacacat
ggtagaaggcatcttagagcgtacgagccccatttagcaggcgtggcattaagcaatgtc
gaatcatcgagaacaatcgcacaagtcctttacgatatgaacgaccagagtagcagtagt
catcacaggtga
DBGET
integrated database retrieval system
