Atta colombica: 108688560
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Entry
108688560 CDS
T11098
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acoc03009
]
108688560
Enzymes [BR:
acoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108688560
Ribosome biogenesis [BR:
acoc03009
]
Eukaryotic type
90S particles
Helicases
108688560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
AAA_22
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
108688560
NCBI-ProteinID:
XP_018050351
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MSISNMSEEVKHFSDLKLNSWLLAQCESMGLKKPTPIQQNCIPRILVGEDCIGCAKTGSG
KTLAFVLPILQKLCEDPYGIFALVLTPTRELAFQIADQFAAIGKAINLKKCIIVGGMDMM
VQGLELSKRPHIVIATPGRLADHLDSCDTFSLQKIKFLVLDEADRLLGGHFDGQLKTIFA
ALPKQKQVLFFSATMTDALDKVKQIASAEVFTWQEEDDSGIATVKELDQRYVLCPKDVLD
SYLVEIIRTFRTTNEDGSIMIFTDTCKHCQLLSMTLNDVGFTNVALHAMIKQKERLAALN
KFKSNHVQILIATDVAARGLDISTVQLIINHVIPNVPKEYIHRVGRTARAGKNGMSISLI
TPNDIKLLHAIENVIGIKLMEYKVDDKEIVTILTQISVAKREAEIKLDEINFYEKKIINK
QKKLILEELDEGQLPDEVDIAKEERKKCKKKKKRKLLMESLQKNKTANIYI
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagcatttccaacatgagcgaagaagttaaacatttttcagatttgaaattaaattct
tggctccttgcgcaatgcgagtctatgggcttaaaaaagccaactcccattcagcaaaat
tgcattcctcgaatattggtgggtgaagattgcataggttgtgccaaaactggtagtggc
aaaactttggcatttgtcctgcctattttgcaaaaattgtgcgaagatccatatggcata
tttgctcttgtgttaacaccaacgagggaactagcttttcagattgctgatcaattcgcc
gcaattggcaaggctatcaatctgaaaaaatgtataattgttggtggtatggacatgatg
gtacaaggattagaattgtcaaaacggccacatatagtaatagctacaccaggtcgattg
gcagatcatttggacagctgtgatacattctccttgcagaagatcaaatttttagtattg
gacgaagccgatagattgctcggtggccatttcgatggacaattgaaaacaatatttgcc
gcattgcccaaacagaaacaagtattatttttcagtgctactatgacagatgctctggat
aaagtaaagcaaatagcttctgctgaggtttttacatggcaagaggaagatgactctggt
attgccactgtgaaggaattggatcaacgttacgtattgtgtcctaaggatgtgctcgat
tcatatctggtagaaataattaggacgtttcgtactacgaacgaggatggttccatcatg
atatttacggacacttgcaaacactgtcagttattatctatgacgttgaatgatgtcgga
tttacaaacgtggctcttcacgcaatgataaagcaaaaggaacgtttagcagcactaaat
aaattcaagtcaaatcacgtacagatattaattgctactgatgtcgcggcgagaggtctg
gatatctccacagtacaattaatcattaatcatgtaataccgaatgtaccaaaagaatac
attcatagagtcggtagaacagctcgcgcaggtaaaaacggtatgtcgataagcttgata
actccaaacgacataaagttgttgcacgcaattgaaaatgtcataggcattaagttaatg
gagtataaggtagacgacaaagaaatcgttacaatcttgacgcaaatatcagtggcaaaa
cgggaagcagaaatcaaattggacgaaattaacttttatgaaaagaaaataatcaataag
caaaagaagttaatcttagaagaattagatgaaggccaactgccggatgaggtagatatc
gccaaagaggagagaaaaaaatgtaagaagaaaaagaaaagaaaattgttgatggaatct
cttcaaaaaaataaaacagctaatatatatatataa
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