Atta colombica: 108688637
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Entry
108688637 CDS
T11098
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1-like
KO
K11274
chromosome transmission fidelity protein 4
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoc03036
]
108688637
Chromosome and associated proteins [BR:
acoc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
108688637
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Sugar_tr
MFS_1
WD40
Ctf4_C
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_RIG_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_Vps41
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
DUF6476
Beta-prop_WDR90_POC16_2nd
HMG_WDHD1
Beta-prop_IFT140_1st
HMG_box
Motif
Other DBs
NCBI-GeneID:
108688637
NCBI-ProteinID:
XP_018050468
LinkDB
All DBs
Position
Unknown
AA seq
1415 aa
AA seq
DB search
MSLIRKPMRYAHQEGHTDVCYYSGEKRGLITCGCDGDVRFWLNLMDDDPTTSCISEQAIT
VISKVLNSYEAVQILTYPDLEKEGIVTRFSAPVSALATAKDSSLIVSGACDMRIQVTNIN
TLDSIELEGHEAPILGLSLDPKEEFVASSSADGSIRVWNIKEKRTVHVWNNIVPKCNSFF
IAKSYCTPSFKCTDGSYLAYPANKDIVIVERLSWKELCRLKCPTLKTEISICKFSECGTR
IAASSLYGEIVVWNVETKEIIGYLEHEQDTKITALVWHIDHSNEIAFCDALGKLGCIDVI
STSKPRNDVMLDFEKNEDTIENNIALLDHDDDDDENVISLNKIKASVNLEDDEKSNFDVD
SEKPPCDTKTFIPNVKLQSSFQPGSTPSHLLSYFMMWNDVGMIRCFSSEDGEECSIEVEF
HDVTVHRSMHINNYLRHSLAALSTQALALSCAASEDGPSKIVVIALQGWGSGNKEWSLDL
PEGEESECLTVGDNFIAVATSKRNLRIFMIGGTQREILAVPGPVVAMNGLGNHLLIAYHA
GIGPAGDQNISLLWIQIQGAHLRSQTLTLPLSPTSDLMWLGLSDARSPTIMDSDDVIRIY
DKRSCQWRVLCDANIQGKGRADHYFIIGVSEYERNMRCILCKGSYYPPTTPRPIITEISL
SAPLCEPESEKTEKEYKLWEIGNNPLDETEAMLTLIALACKSNLEYRAVDICEQIASTKV
IDLAIRYALRSNKMVLANKLETIADAKSDSKDTKEKEMENLQDDFTSNGNFNDSQDINNQ
EDNDVSLPSIKKPEIEIKPLAMSQTLKRVNPFLKAGSPSLSPRGLAGLNSLPEKPQKPAL
KITPIKSKSKTESKKDSFINWYAKNKKNLQEEFPEVNVSELTKIGLTRYKEEMAQSNTDN
ATGSSELFKKRKLSSHVPLDPVQEAMGSMGPWHIIIAVVISLVKFPVAWHQLSIVFLAPP
TNFSCIAPLSATNDSMIMKCEVDVGNGTIEECTEFSYDKRIFRESIITQWDLVCDREQLA
NLAQSCTMFGVLVGNLIFSIMADRIGRKKPLIIAIALQSVTGFASAFAPWYELFLILKFL
CAVSTGGTMLVSFVLLMEIIGVEWRSIVSVLYHVPFLIAHVMNSLISYLTLTWYGFQMAV
SIPSIFLLSYYWIVPESPRWLLAIGKYRQAERILLKAARRNKIPVENVKLALETYENQMT
IRNAKNNEKYNITHLFRTPNLRLKTTYVSINWFVCGICFFGLAQYMGHLDGNIFINVAVS
AAMEIPGTIIVLFLISRVSRLKILMGGNILSGVSLLLITLITNGNVQIFLASLGLVGMAI
SFPTVYLYSCEVFPTVVRNVGVGLGSTSARIGSIIAPFIATMGTIQPWLPPVIFGIAPIL
GAILCLFLPETMNCELPETIEDAENFGKGKSKEEH
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaataaggaaacccatgcgatatgctcatcaagaaggacacactgacgtttgc
tattattctggcgaaaaaagagggctcattacgtgtggttgcgatggggacgttagattc
tggttaaatttaatggacgatgacccgaccaccagttgtatttcagaacaagcaattact
gttatctcaaaggtacttaatagttatgaagcggtacaaatacttacttatcctgattta
gagaaggaaggaatagttactagattttcagcaccagtctcagcattggcaacagcaaaa
gatagtagtttaatagtatctggtgcctgcgatatgcggatacaagtcacaaacattaat
actttagacagtatagaattagaaggtcatgaagcacctatcttgggtttatctttagat
ccaaaagaagagtttgtggcatcttctagtgctgatggatctattcgagtatggaatatt
aaagaaaaaagaaccgtacatgtttggaataatattgtaccaaaatgtaactcctttttt
attgcaaaatcatattgcacaccttctttcaaatgtacagatggcagttatttagcatat
ccagctaacaaagatatagttatcgtggagagattatcctggaaggaattgtgtagactg
aagtgtcctactttaaaaactgaaatcagcatttgtaagttctctgagtgtggcacgcgc
attgcagctagttcactgtatggagagatagttgtatggaacgttgaaaccaaggaaata
attggatatctcgaacacgagcaagataccaaaatcactgcattggtgtggcatatagat
cattcaaatgaaatcgcattctgtgatgcattaggaaaattaggatgcattgatgtgata
agtactagtaagcctagaaatgatgtaatgttagattttgaaaaaaatgaagatacaata
gaaaataatattgctttattggaccatgatgatgatgatgatgaaaacgtgatatccctg
aataaaatcaaggcttctgtcaatttagaagatgacgaaaaatctaattttgatgtagac
tctgaaaaacctccatgtgatacaaaaacttttatacctaacgtaaaattgcaatcatct
tttcaacccggatctacgccctctcatttattatcgtattttatgatgtggaacgatgtg
ggaatgattagatgtttctcatcagaggatggagaagagtgtagtattgaagtggagttt
catgatgttacagttcatcgcagcatgcacataaataattatttacgacattcattagct
gccctatctacccaagcacttgctctaagctgcgcagcttctgaagatggccctagtaaa
attgtcgtgatagctctgcaaggttggggttctggaaataaagaatggtctttggatcta
ccagaaggagaggaaagcgaatgcttaacggttggtgataattttattgcagtagcaaca
tctaagagaaatttaagaatatttatgataggagggacacaacgtgagattttagctgtg
cctggacctgtagttgcaatgaatggtctaggaaatcatcttttaatagcttatcacgct
ggaattggtccagcaggtgatcagaatataagtttactatggatacaaatacagggagcg
catttacgcagtcaaactttaacgcttccactttcaccaacttcagatctcatgtggttg
ggattatcagatgctcgttcgcccactatcatggattctgacgatgtcattaggatatat
gataagagatcttgtcaatggagagtgctctgtgatgcaaatatacagggaaaaggtaga
gcagatcactatttcataatcggtgtaagcgaatacgaacggaatatgcgatgtatcctt
tgcaaaggtagttattatccaccgactactccgcgaccaataatcactgagatatctcta
tctgcacctctctgcgaaccagaatctgagaaaactgagaaagaatataaactgtgggag
ataggaaataatccattggatgaaactgaagcgatgttaactttaatagcgcttgcctgc
aaaagcaatttagaatatcgcgcagtggacatttgcgaacaaattgcgtcaacgaaagtg
attgatttggccatacgatatgccttgcgttcaaataaaatggtattggcaaataaattg
gagacgatcgctgacgcaaaatcagattccaaagatacaaaagaaaaagaaatggaaaat
ctccaagacgattttacaagtaacggtaattttaacgatagtcaagacattaataatcaa
gaagacaatgatgtgtctttaccatcgattaaaaaaccagagatagaaattaagccatta
gccatgagtcaaacattaaaaagagtaaatccatttttaaaagctggaagtccatctcta
tcgccaagaggtttagctggtttaaatagtttacccgagaagccccagaaacctgcatta
aaaatcacgcctattaaatcaaaatcgaaaactgagtctaagaaagactcgtttattaat
tggtacgccaaaaataaaaagaatttgcaggaagaatttcctgaagtaaatgtttctgaa
ttaaccaaaatcggtttgacacgatacaaagaagagatggcgcagtcgaacacagacaat
gcgactggatcttcagaactcttcaagaaacgaaaattatcaagtcacgtaccattggat
cccgttcaagaggctatgggctccatgggtccatggcacatcataattgccgtggtgatt
tctctcgttaaatttccagtagcttggcaccagctctctatcgtattccttgcaccgcct
actaatttctcatgcatcgctcctttgtcagcaactaacgactccatgataatgaaatgt
gaagttgatgttgggaatggcacaatagaagagtgcactgaattcagttacgataagcga
atatttcgagagagtatcataacgcagtgggatttagtatgtgatagagaacagttggct
aatttagcacaatcttgcacaatgtttggtgtgctcgtgggtaatttaatttttagtata
atggctgatagaattggccgaaagaaaccgttaataatcgcaattgcactgcaatcagtg
acaggatttgcaagtgcatttgcaccgtggtacgaattgttcctaatactcaaatttctt
tgtgccgtatctactggcggaacaatgctcgtcagcttcgttttacttatggagattatt
ggagtcgaatggcgatcaattgtgtcggttctttatcacgtaccatttttaatcgcacat
gtaatgaattccttgatatcttatttgacacttacatggtatggatttcaaatggccgtg
tcaataccgtcaattttcttattatcgtattactggattgttccggaatcaccgaggtgg
ttactagctataggcaaatacagacaagcagaacgaatcttgctgaaagctgccagaaga
aacaagataccagtagaaaatgtaaagctagcgcttgaaacttacgagaatcagatgaca
atccgaaacgcgaagaataatgagaaatacaatatcacgcatttatttagaaccccgaat
ttgagattgaaaactacatatgtgagtatcaactggttcgtctgtggtatctgtttcttc
ggattggcgcaatacatgggtcatcttgacggcaatatattcatcaacgtcgcagtttct
gcggccatggaaatacctggaaccataatagtactgtttctgatatcgcgagtttcgcgt
ttaaaaattttgatgggcggaaacatcttatccggcgtgagtttgcttctgataactctt
ataactaacggaaatgtccagatatttttagcttcattagggctcgtgggtatggctatt
agctttcctacagtatacctgtacagttgtgaagtatttccgactgtcgtaagaaatgtt
ggcgttggtttgggaagtacttctgccagaattggaagtataattgcaccgttcattgcc
acaatgggtactattcaaccttggctgcctccggtaatatttggcatagcgccgatatta
ggcgctatactctgtttatttttaccagaaacgatgaattgcgaattaccagagacaata
gaagacgccgaaaattttggaaaaggaaaatccaaggaagaacattga
DBGET
integrated database retrieval system
