KEGG   Atta colombica: 108688686
Entry
108688686         CDS       T11098                                 
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
acoc  Atta colombica
Pathway
acoc03013  Nucleocytoplasmic transport
acoc03015  mRNA surveillance pathway
acoc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108688686
  09122 Translation
   03013 Nucleocytoplasmic transport
    108688686
   03015 mRNA surveillance pathway
    108688686
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acoc03019]
    108688686
   03041 Spliceosome [BR:acoc03041]
    108688686
Messenger RNA biogenesis [BR:acoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     108688686
    TREX complex
     108688686
Spliceosome [BR:acoc03041]
 Complex C
  Other components
   EJC/TREX
    108688686
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    108688686
SSDB
Motif
Pfam: RRM_1 FoP_duplication BspA_v Btz YHR127W_C
Other DBs
NCBI-GeneID: 108688686
NCBI-ProteinID: XP_018050516
UniProt: A0A195BA74
LinkDB
Position
Unknown
AA seq 252 aa
MKMVDKIEMSLDDIIKQTKGSRTRGGGASGRRGRGAGSSPRRGARRVQRITGGGVMRGRN
RGGIARSSLPYTRGDVNSAWKHDMFDGVKKVGRGAIGSAGTTKLLVSNLDFGVSDSDIQE
LFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYHGVPLDGREMNIQVATSE
LPITSVRGPRLSGVNYTQRPQARFRGNRGTGSIRGRGSGGRRGGRGGTRQTTKTPTAEEL
DAELEAYVKEVK
NT seq 759 nt   +upstreamnt  +downstreamnt
atgaagatggtggataagattgaaatgagtctagatgatattattaaacagaccaaaggg
tctaggacgcgcggcggcggagcaagcggtagacgcggcagaggcgctgggagttcacct
cgtcgaggagcacgtagggtacagagaatcaccggtggcggcgtcatgcgaggacgtaat
cgcggtggaattgcacgcagctctttaccgtatacgaggggagatgtaaacagtgcttgg
aaacatgatatgtttgatggtgtaaaaaaggttggtcgtggtgcaataggcagtgcagga
acgaccaaacttttggtatcaaatcttgattttggtgtatcagattcagacatacaggaa
ttattcagtgaatttggacctttaaaatcagcagcagtacattatgatagatcaggtcga
tctttaggctctgctgatgtcatatttgaaagacgggcagatgctattaaagcaatgaaa
cagtatcatggagttccattagatggacgtgaaatgaatatacaagtagctacttctgaa
ttaccaatcacttctgttcgtggcccgagacttagcggtgttaattatacacaaagacct
caagcacgttttaggggaaatcgcggtacaggatctattagaggtcgtggaagtggaggt
cgacgtggaggtagaggaggcactcgacaaacgacaaagacacctacggctgaagaatta
gatgcagaactggaagcttatgtgaaggaagtcaagtaa

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