Atta colombica: 108688686
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Entry
108688686 CDS
T11098
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
acoc Atta colombica
Pathway
acoc03013
Nucleocytoplasmic transport
acoc03015
mRNA surveillance pathway
acoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108688686
09122 Translation
03013 Nucleocytoplasmic transport
108688686
03015 mRNA surveillance pathway
108688686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108688686
03041 Spliceosome [BR:
acoc03041
]
108688686
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108688686
TREX complex
108688686
Spliceosome [BR:
acoc03041
]
Complex C
Other components
EJC/TREX
108688686
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108688686
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
BspA_v
Btz
YHR127W_C
Motif
Other DBs
NCBI-GeneID:
108688686
NCBI-ProteinID:
XP_018050516
UniProt:
A0A195BA74
LinkDB
All DBs
Position
Unknown
AA seq
252 aa
AA seq
DB search
MKMVDKIEMSLDDIIKQTKGSRTRGGGASGRRGRGAGSSPRRGARRVQRITGGGVMRGRN
RGGIARSSLPYTRGDVNSAWKHDMFDGVKKVGRGAIGSAGTTKLLVSNLDFGVSDSDIQE
LFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYHGVPLDGREMNIQVATSE
LPITSVRGPRLSGVNYTQRPQARFRGNRGTGSIRGRGSGGRRGGRGGTRQTTKTPTAEEL
DAELEAYVKEVK
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggtggataagattgaaatgagtctagatgatattattaaacagaccaaaggg
tctaggacgcgcggcggcggagcaagcggtagacgcggcagaggcgctgggagttcacct
cgtcgaggagcacgtagggtacagagaatcaccggtggcggcgtcatgcgaggacgtaat
cgcggtggaattgcacgcagctctttaccgtatacgaggggagatgtaaacagtgcttgg
aaacatgatatgtttgatggtgtaaaaaaggttggtcgtggtgcaataggcagtgcagga
acgaccaaacttttggtatcaaatcttgattttggtgtatcagattcagacatacaggaa
ttattcagtgaatttggacctttaaaatcagcagcagtacattatgatagatcaggtcga
tctttaggctctgctgatgtcatatttgaaagacgggcagatgctattaaagcaatgaaa
cagtatcatggagttccattagatggacgtgaaatgaatatacaagtagctacttctgaa
ttaccaatcacttctgttcgtggcccgagacttagcggtgttaattatacacaaagacct
caagcacgttttaggggaaatcgcggtacaggatctattagaggtcgtggaagtggaggt
cgacgtggaggtagaggaggcactcgacaaacgacaaagacacctacggctgaagaatta
gatgcagaactggaagcttatgtgaaggaagtcaagtaa
DBGET
integrated database retrieval system