Atta colombica: 108688764
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Entry
108688764 CDS
T11098
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36 isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
acoc Atta colombica
Pathway
acoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108688764
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
acoc01002
]
108688764
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoc04121
]
108688764
03036 Chromosome and associated proteins [BR:
acoc03036
]
108688764
03400 DNA repair and recombination proteins [BR:
acoc03400
]
108688764
Peptidases and inhibitors [BR:
acoc01002
]
Metallo peptidases
Family M67
108688764
Ubiquitin system [BR:
acoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
108688764
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
108688764
BRISC complex
108688764
Chromosome and associated proteins [BR:
acoc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
108688764
DNA repair and recombination proteins [BR:
acoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
108688764
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
108688764
NCBI-ProteinID:
XP_018050686
UniProt:
A0A195BXN5
LinkDB
All DBs
Position
Unknown
AA seq
253 aa
AA seq
DB search
MDDSPLQKVELQTDVYMVCLQHALSTENFEVMGLLIGNFECGVAKISAVIILRRLDKKKD
RVEISSEQLLKAAAEAERLTVELNRPMRVLGWYHSHPHITVCPSHVDVRTQATYQTMDHS
FVGLIFSVFSEGKESKEHEIFLNCFQSDNGEATEIPLEIVHTPDISDRCLRTMTDLSKIL
VQEEEDMAEACKDHPDILASIHNDAVRTRALVHITDIITKPLVQTFEKRIALNKLRTIHL
RRQLQELQKMCNG
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggacgactctccattgcaaaaagtagagctgcaaacagatgtctacatggtatgtttg
cagcatgctttatctacagagaactttgaagtaatgggcttacttatcggtaattttgag
tgtggagtagcaaaaatatcagctgttattattttgcgacgtctagataagaagaaagac
agagtagagatatcgtcagaacaattattgaaagctgctgctgaagctgaacgattaact
gtagaattaaatcgacctatgcgcgtccttggctggtatcattcgcatccacatattaca
gtttgtccatcacatgttgatgtcagaactcaagctacttatcaaacaatggatcacagt
tttgtaggcttaatattttcagtattttcagaaggcaaagaatcaaaagaacatgaaatc
ttcttaaattgttttcaatctgataatggtgaagctacagaaataccattagaaatagta
catactccagatatttcagacagatgtttaagaacaatgacagacttatcaaaaattttg
gtacaagaagaagaagatatggctgaagcctgtaaagatcatccagatatcctcgccagt
attcataatgatgctgtcaggacacgtgcgttggttcatataacagatatcattacaaag
cctttggtacaaacatttgaaaaaagaatagcgttaaataaattgcgaactatacatctc
cgaagacaattacaagaattacaaaaaatgtgtaatggttaa
DBGET
integrated database retrieval system
