Atta colombica: 108688916
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Entry
108688916 CDS
T11098
Name
(RefSeq) LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 7
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
acoc Atta colombica
Pathway
acoc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108688916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoc04121
]
108688916
03036 Chromosome and associated proteins [BR:
acoc03036
]
108688916
Ubiquitin system [BR:
acoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108688916
Chromosome and associated proteins [BR:
acoc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
108688916
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR3_2nd
Beta-prop_Aladin
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML_2
MIOS_WD40
WDR55
WD40_RFWD3
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR41
Beta-prop_EML
DUF6031
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
108688916
NCBI-ProteinID:
XP_018050949
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MWILYKQKYQGIMAMHTIPPKRKEIYKYEAPWPLYSMNWSVRPDKRFRLALGSFVEEYNN
KVQIVSLDEETSEFSAKSTXXXXXTTXXIKFLPGQLPDLLATSGDYLRVWRAAEPETRLE
CVLNNNKNSDFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQLMGRVTNMVSGHVK
TQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHTPLLRL
AWNKQDPNYLATVAMDACEVIILDVRVPCTPVARLNNHRASVNGIAWAPHSSCHICTAGD
DHQALIWDIQQMPRAIEDPILAYTAAEGEVNQIQWGATQPDWIAICYNKAAEILRV
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtggattctttataagcagaaatatcagggcatcatggctatgcataccataccacca
aaacgaaaagaaatctacaagtatgaggcgccatggccattgtacagcatgaactggtca
gtgagacccgacaagagatttcgtctagcattgggaagctttgtagaggagtataataac
aaagtacaaattgtttcattggatgaagaaacatctgaattcagtgctaaaagtacannn
nnnnnnnnnngcactacttaataaataaaatttttaccaggtcaacttcctgatcttctt
gccacatccggtgattatctgagagtatggcgtgctgcggaacctgagactcgtttggag
tgtgtcctaaataataataagaactcagatttctgtgcaccgcttacgtctttcgactgg
aacgaggtggatcccaatctaatcggaacttctagcatcgatactacctgtacaatttgg
ggattggaaacagggcagcttatgggtcgagtcacaaacatggtcagtggtcacgtgaaa
acgcaattgattgcacatgacaaggaagtatatgatatcgcgttcagtcgtgccggaggt
ggccgcgacatgttcgcctctgtcggtgctgatggatccgtgaggatgtttgatttacga
cacttagagcattcgacaattatctatgaggatccgcagcacactccgctgttgcgatta
gcatggaacaagcaagatcctaattatctcgctactgtagcgatggacgcttgcgaagtc
atcattctggacgttcgagtaccgtgcacgccagttgcaagattgaataatcacagggcc
agtgttaatggaatagcctgggccccgcattcatcctgtcacatttgcacagccggtgat
gatcatcaggctttaatctgggatatacagcaaatgccaagagcaatagaggatcctata
ctcgcttatactgccgcagaaggcgaggtcaatcaaattcaatggggtgccacgcaaccc
gattggatagccatttgttacaataaagcggcagagattcttcgagtataa
DBGET
integrated database retrieval system
