Atta colombica: 108689247
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Entry
108689247 CDS
T11098
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoc03000
]
108689247
03036 Chromosome and associated proteins [BR:
acoc03036
]
108689247
Transcription factors [BR:
acoc03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108689247
Chromosome and associated proteins [BR:
acoc03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108689247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
108689247
NCBI-ProteinID:
XP_018051425
LinkDB
All DBs
Position
Unknown
AA seq
2380 aa
AA seq
DB search
MFFLFLFFLYRLITIGSHCDYVVEDIRIIKDRQIKCTACGNELNIQTNRIFSHPFIGILQ
CEICWNELKNIQTRFDEDKVRHYCHICGIYNNRKLYECCNKNCFSAFCKGCIKRNVSLSL
LDVEKDDWECFMCNSKPLWNLRAICATVIDSLPKKSNKGRSNKIEKKVLPSQIQRINETK
YIQNLLDSMCDKDDSSEKSFVSTRFAGKNRRTNYDVNSLQKKKKNAVDLTDSSSEDSFCK
RKNLSILSKRNNQSKNESDPKAKYVGDFSAQKVSVVKEKKISKENKISSDSSDNSSDISS
NKIRKKHIIKHNKSEKIKSKTNDIYSSDSESDENDTDIASNVSKRISKDTRQQNKKMDNS
YNVRSRNKVKKYNSTSESEDEKYIKRNITRKRSETSQLMSHNNDEQKRDKSSKQRLSNIQ
EDNSDNSSSKEFQKIKLQKVNRNKYSMRQLANLEIDHTKTPKNSTNNSDKEINEQSNKKN
LTDMKKIVMDCKKVCSDFQMYIESIEQLYGKKDEEKLVLKSTEKIDRLRMILKKKEKNLL
TSYQVWSRNRKISVTKKSNKVVTDSESEEKRENYIENDDEHVFDDKQDENKDVSECDSEE
IFSADETRSPQKMQATRRKQDLARMEKSLYNNETDSDDEDRMSINKSKINIIEDKNNVED
DSTISPILKLKEKKISKERSSKKQLSSECNKSNSETQSSDKNETEIEDSPSKSNSNEMAL
ENDETNRLKRNIIDESMDMFDTPPEDTEKSRTEVETNCDKEELLQMSKDKLSDPCKNSLQ
NKISDQKERTIFEEEEDLSNQSNQKKVATISVTNKEVYNDSKTSRETNIDDNESLDDAEA
LAKKALLADSDTSETSNKNVAKLTENSTDDETTNRIKKKNELEGNDSDVNSISTIKFSTF
KNANTDAEKDVITEAEIKVKKKSDEQSDERSLQEMSSSEEENIKSEKAAKKALLESDDSI
FTLKESGESADSFKKLEKSDSSKKNAEAKLSLLASSSEDSSSELILSEMINVSKNIKRNR
EPETNEHNVSRLKKRRFKLNENYYYKNDKKLRMSCKVHLERLSMEILKRYSHALKKSREY
LEHKELKSLVNLDKLERNYCKKNTKKDCDSLIDNDSSSKNSKRSNKRENTKIREESLMDH
LKKIENGDSVATIETDLDTEDQLLYQKQNVDDNITVSNDALISEADRLAKENLLNSSDSD
EKEMLLDSDSSIKNDDTNEKKENKKKQYQKKSEEKTSKNDNKKDKSDWRRDKILRMKLSD
SDSDAEKEKWEKKQEKLANKSKNNNSDSDEEKSFKSKRKKKKTRRRIIDSDSDIKITDVD
SDNSSNTSSPFMTLNSNDSDDTRKEKEKSNRNKRRKRGDSSGTDSSLSEKKPKPKRKRIK
KMASDSDSTDVEMINSQESSPGKSGRKNIRKVLKDKQVAEDTKQAAKEEEERLKRIAERQ
ALYNEMFEMRLAGEEKVDKLVLDFDTETKQELVTVHKELIKQLKPHQAQGIKFMWDACFE
SLERAKTTSGSGCIIAHCMGLGKTLQVITLTHTLLTHEATNVKTILVVCPLSTVLNWRNE
YNAWLKDLDDFEVYELTKFKKNFERKYQLQRWQKTGGVMIIGYEMFRNLTGPNKNIRKAM
KEIILECLVDPGADLVVCDEGHLLKNEDTALSKCMRNVKTLRRIVLTGTPLQNNLIEYHC
MVQFAKPNLLGTKKEFLNRFVNPITNGQFHDSTAYDVKLMKKRAHVLHKMLEGSVQRFDY
SVLTPFLPPKQEYVIFVRLTDVQVKLYQYYLENVAKLLIGQRRTLFADFQALQRIWTHPL
VLRLNAEKIEKANEKKDLSDSEGSLKDFIDDDTTDTESSSSRSSSNDSNSDSDVQAINEK
DNANIPKRNTRNNPVEEESTEQIKETSESEVTTEWWLQFVQHEHFEDMRESTKLLLLFAI
LKESEQIGDKVLVFSQSLYSLTLIEEFLRKIDDQTQKDESCDTLDNHTGSWSLGLDYFRL
DGQTSPENRNLWCKIFNRPTNVRARLFLISTRAGGLGINLTAANRVIIFDASWNPSHDVQ
SIFRIYRFGQKKPCYVYRFLAAGTMEEKIYNRQVTKLSLSCRVVDEQQIERHYSNHNLNE
LYTFEGYDKEKPTLNLPKDRLLAEIFLKFKDIVENYHEHDSLLENKAEEELDEEERKQAW
LEYEEEKKGRPLINPQMTNTALMMNQNNAFLQQCMMMRNSMQPNMMSQNIFEYENLQQLI
RKDYPNATPEQQKMMTNRAIVEMYNYWEKQATLYNKQPVQSVPFSPNFQQRPQAPNFQQR
PQVSVTNNMHSQVTQLGQLLSGQSMNYVNANKPAQLNEGDLIPNLFAKQNTSSNNNVGVT
VDQDIIEVVPTTSTGITRQSGMSSVQIAAQPIDNSKIQEE
NT seq
7143 nt
NT seq
+upstream
nt +downstream
nt
atgttttttctttttcttttttttttatatcgactaattactatcggttcacattgcgac
tatgtcgtggaagatattagaattatcaaagatagacaaataaagtgtactgcctgtggt
aatgaattaaatattcagacaaatcgaatcttttctcatcctttcattggaatacttcag
tgtgagatatgctggaatgagttgaagaatatacagaccagatttgatgaggataaagtt
aggcactattgtcatatatgcggtatatataacaacaggaaattatatgagtgttgtaac
aaaaattgtttctcagcattttgtaagggatgtataaagagaaatgtgagtctatcgcta
ttggatgtggaaaaggatgattgggaatgttttatgtgtaattctaaaccactttggaat
ctaagagccatatgtgctactgtaatagactctcttcccaaaaagagtaacaagggaaga
agcaacaagattgaaaaaaaagttttaccatcacaaatacaacgaataaacgaaacaaaa
tacatacaaaatctcttggatagtatgtgtgacaaagatgattcttccgaaaaatcattc
gtttctacaagattcgcgggaaaaaatcgtcgtacaaattatgatgtaaactcccttcag
aagaaaaagaaaaatgcagtagatctaacagattcgtccagcgaggattcgttttgtaaa
cgtaaaaatttatctattctttctaaaagaaataatcaaagtaagaacgagagtgatcca
aaagcgaaatatgtaggagatttttccgcgcaaaaagtttcagttgtaaaagaaaaaaaa
atatcaaaggaaaataaaatatctagtgattcaagtgataattctagcgatatatcgtca
aataaaataagaaaaaaacatataattaaacataataaatctgaaaaaataaaatctaaa
acaaatgatatatattcttctgacagcgaaagtgatgagaacgatacagatatagcgtcg
aatgtatcaaagaggatttcaaaagatacaagacagcagaataaaaaaatggataattct
tataatgtaagatcgaggaacaaggtaaaaaaatataattcgactagtgaatctgaagat
gaaaaatatataaaacgaaatataacgaggaaacgttcagaaacgagtcagctgatgtcg
cataataatgacgaacaaaaacgtgacaagtcatcgaagcagcgactttctaatatccaa
gaagataattcggataatagttctagtaaagaatttcagaaaataaaacttcaaaaggtg
aatcgcaataaatactctatgaggcaattggcaaatttggaaatagatcatactaagaca
cctaagaattctacgaataacagtgataaagaaatcaatgaacaatcaaataaaaaaaat
cttacagatatgaaaaaaattgtaatggactgtaagaaggtatgttcagattttcagatg
tatattgaaagtatagaacagttatatggtaaaaaagacgaagagaaacttgtgttgaaa
tctacagaaaaaattgatcgcttgaggatgatattgaagaaaaaagagaaaaatttatta
acttcttatcaggtgtggtctaggaatagaaaaatatctgttacgaaaaaatcaaacaaa
gtagttacagatagtgaatcagaagaaaaacgtgaaaactatatagagaatgatgatgaa
cacgtttttgatgataaacaggatgaaaataaagatgtatccgaatgtgatagcgaagaa
atattttcagcagatgaaacaagatcaccgcagaagatgcaagcgactcggcgtaaacag
gatctagcaagaatggaaaagagcctatataataatgaaactgactccgatgatgaagat
agaatgtcaataaataaatcgaaaataaatataatcgaagataaaaataatgtggaagat
gattcgaccatttctcccatattaaaattaaaagaaaagaagattagtaaagaacgatca
agtaaaaaacaattatcttcggaatgcaataagagcaacagcgaaacacaatcgtctgat
aaaaatgaaactgagattgaagattctccttcaaaaagtaatagcaacgaaatggcatta
gaaaatgatgaaacaaatcgattgaaaaggaatataatcgacgagtcgatggatatgttc
gacacacctcccgaagatacagaaaagagcagaacggaagtcgaaacaaattgtgataaa
gaagagcttttacagatgtctaaagataaactttcagatccttgcaaaaattccttacaa
aataaaatttcagaccaaaaagagagaacaatttttgaagaagaggaagatttatcaaat
caaagtaatcagaaaaaagtggcaactatatctgtaaccaataaggaagtttacaacgac
tcgaaaacatccagagaaacgaatatagatgataatgaatctcttgatgatgctgaagca
ttggcaaagaaagctctgttggctgattctgacacatcggagacatccaataaaaatgta
gctaagttaactgaaaattcaacagacgatgaaactactaatcgaatcaaaaagaaaaac
gaattggaaggtaatgattctgatgtcaatagcattagtacaataaagttttcaactttt
aaaaatgcgaataccgacgctgaaaaagatgttatcactgaagcggaaattaaagttaag
aaaaaaagcgatgaacaatcagatgaaagatctcttcaagaaatgagctcttcggaggag
gaaaatatcaagtcagaaaaagctgccaaaaaagctcttttagaatcggatgattctata
tttactttaaaggaatcgggagaatccgccgattcctttaagaaattagaaaagtcggat
tcttctaagaaaaatgccgaagcgaaactgtcgcttttagcatcttccagtgaagattct
agttctgaactgattctgtctgaaatgataaatgtttcaaagaatattaaacgtaatcgt
gagcctgagactaatgaacataatgtctccagattaaagaagagaagattcaaacttaat
gaaaattactactacaaaaatgataagaaattgagaatgtcctgcaaagttcatttagaa
cgattaagcatggaaattcttaaacgctattcacatgcattgaaaaagtcaagagaatat
ttggaacataaggaattaaaaagtctcgttaatctggataaactcgaaaggaattattgc
aagaaaaatacaaagaaagattgtgattcgttgatagacaacgattcgtcctcaaaaaat
tcgaaaaggtcaaataaaagggaaaatacaaagatcagagaagaatctttgatggatcat
ttgaaaaaaatagagaacggcgattccgtggcaactatagaaacagatcttgatactgaa
gatcaattactttatcaaaaacaaaatgtagacgataatataactgtctctaatgacgct
ctaatatcagaggcagatagactcgcaaaagagaatctgttaaattcctctgattcagac
gagaaagaaatgttactggacagtgattctagcataaagaatgatgatacaaatgaaaaa
aaagagaacaagaaaaagcaatatcagaagaaatctgaagagaaaacttcaaaaaatgat
aacaagaaagataaaagcgattggaggagagacaagatattaagaatgaaattatctgat
tctgattctgatgctgaaaaagaaaaatgggagaaaaaacaagaaaaacttgcaaataaa
tccaaaaataataacagtgattctgatgaagaaaaatcttttaagtctaaaaggaagaaa
aagaagactaggcgaagaatcattgattcagattcagacattaaaataacagatgtagat
tctgataactcttctaatacttcaagcccttttatgacactaaattcaaatgattcagat
gacacgagaaaagaaaaagagaaatcgaatcgaaataagagacgtaaacgtggtgattcg
tcaggtacagattcttcgctttcagagaagaaaccaaaaccaaaacgaaagcgtattaaa
aaaatggcatccgacagcgatagtactgacgtagaaatgataaactcgcaagaatcttca
cccggtaaaagtggtcgaaaaaatatacgaaaagttttaaaagacaagcaagtagcagaa
gatacgaaacaagctgctaaagaagaagaggagaggcttaaacgtatcgctgaacgtcaa
gctctgtataacgaaatgtttgagatgagacttgccggtgaagagaaagtagacaaactc
gttttagacttcgatacagaaacgaagcaggagcttgttactgtgcataaggaattgata
aaacagctgaagccgcatcaagcacaaggcatcaaatttatgtgggacgcttgttttgag
tctctagaaagggcgaaaactacatccggatctggatgtataatcgcgcactgcatgggt
ttgggcaaaacgctacaggtgattactctgacgcatacccttctcactcacgaagcaaca
aacgttaagacaatattggtagtttgtccattaagcacagtactcaattggcgaaatgag
tacaatgcatggttgaaggatttggatgatttcgaagtgtatgaactgacaaaatttaag
aagaattttgaaaggaaatatcaactgcagagatggcaaaaaaccggcggtgtgatgatt
attggctatgaaatgttccgtaatcttacgggtccaaataaaaatattcggaaggctatg
aaggaaattatattggaatgcctagttgatccgggtgctgatcttgttgtttgtgatgaa
ggccatttattaaaaaatgaagatactgcattaagtaaatgcatgagaaatgtgaaaaca
ttgagacgtatagtacttactgggacacctttacagaacaatttaatagagtatcattgt
atggtgcagtttgcgaaacccaatctattgggtacaaagaaagaatttttaaatagattt
gtaaatccgataacaaatggtcaattccatgattctactgcttatgatgttaaattaatg
aaaaaacgtgcgcacgtattgcacaaaatgttagagggtagcgtgcaaagattcgattat
tctgtgcttacgccattcctaccaccgaaacaggaatacgttattttcgtcagattgaca
gatgttcaagttaaactatatcaatattacttggagaatgttgccaaacttctaattggt
caaagaagaactctcttcgctgattttcaggcgttacaaagaatctggacgcatccctta
gttctacgtctaaatgcagagaaaatagaaaaagcaaatgagaaaaaggatctttctgat
tcagaaggttcgttaaaagatttcattgatgatgatactaccgatacagagagtagcagc
agccgcagcagcagcaacgattcaaacagtgacagtgatgttcaggcgatcaatgaaaaa
gataatgcaaacattcctaaacgtaatacaagaaataatcctgtcgaagaggaatcaacg
gaacagatcaaagagacctcagaatcagaagtgaccacagaatggtggttgcagtttgta
caacacgagcattttgaagatatgagagagtcaactaaactattactcctgtttgcaatt
ctaaaagaaagtgaacagatcggtgataaagtgctcgtattctctcaatctttatattct
ctcaccttaatcgaggagtttttaagaaaaatagatgatcagactcagaaagacgaatcc
tgtgacactcttgataatcatactggaagttggtctttaggactcgattacttccgattg
gatggtcagacttcgcctgaaaatcgaaatttatggtgtaagatatttaatagacccacc
aatgtgagagcgagattgttcctcatatctacacgcgctggaggattaggaataaaccta
actgcagcgaacagagtgattatatttgatgccagttggaatccatctcacgacgtacaa
agtatatttcggatatatagattcggacaaaaaaagccgtgttatgtatatcgatttctt
gctgcgggaacaatggaagaaaagatttacaaccgtcaagttacgaaactgtcgctttcg
tgccgtgtcgttgacgaacaacaaatcgaacggcattacagcaatcacaatttaaatgaa
ttgtatacgtttgagggatacgataaagaaaaacctacattaaatttacctaaagataga
ctgctagcagagatattcttgaagttcaaggatattgtggaaaattatcacgaacatgac
tctctattggaaaacaaggcggaagaggaattagatgaagaggaacgtaaacaggcttgg
ttagaatatgaagaagaaaaaaaaggaagaccgctaataaatccacaaatgacaaataca
gctttaatgatgaatcagaataatgcgtttctacaacagtgtatgatgatgaggaactcc
atgcagcctaacatgatgtctcaaaatatatttgaatacgaaaatctccaacagcttatt
cgtaaagattatccgaatgcaacaccggaacaacagaaaatgatgacgaatcgagctata
gtggaaatgtataattattgggaaaaacaagctacgctatacaataagcaacctgtacaa
tcagtaccgttttcgccgaattttcaacaaagaccacaagcgccgaattttcaacaaaga
ccacaagtttcagtaacgaacaatatgcattcgcaagttacgcagttgggccaattgctt
tcggggcaatcgatgaattatgtgaacgcgaataaacccgcgcaactaaacgaaggagat
ttaattccaaatttatttgcaaaacagaatacctcgtcgaataacaatgtaggcgtaact
gtggaccaggatataatagaggtagttcctactacaagtactggaataacacgtcaaagc
ggaatgagtagcgtgcaaatagctgcgcaaccaattgataacagtaagatccaagaggag
taa
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integrated database retrieval system
