Atta colombica: 108689376
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Entry
108689376 CDS
T11098
Name
(RefSeq) cullin-4A
KO
K10609
cullin 4
Organism
acoc Atta colombica
Pathway
acoc03420
Nucleotide excision repair
acoc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108689376
09124 Replication and repair
03420 Nucleotide excision repair
108689376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoc04121
]
108689376
03400 DNA repair and recombination proteins [BR:
acoc03400
]
108689376
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acoc04147
]
108689376
Ubiquitin system [BR:
acoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
108689376
DNA repair and recombination proteins [BR:
acoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
108689376
TCR (transcription coupled repair) factors
Cul4-CSA complex
108689376
Exosome [BR:
acoc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108689376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
AAA_30
Motif
Other DBs
NCBI-GeneID:
108689376
NCBI-ProteinID:
XP_018051604
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MSRHCDIQFLYDRRVKKVAATAAAAATVAAAAATIAATVATVAVAVDHTAVLEYASAAEC
CKLAAAVSIAHPDEIDAIRVDEIIMTDTASAAAAAAAAADTQKRANFSALTVGNPNGVSK
ISPSLTNAKPGSAKKLVIKNFRSKPKLPENYQEETWEKLQEAVVAIQTSKSIRYSLEELY
QAVENMCNHKMASTLYSNLTILTESHVKANIEQFLAESMDRHIFLKKMNECWQSHCRQMI
MIRSIFLYLDRTYVLQNPSISSIWDMGLHLFRLHIVLNSLVQTRTVEGLLMLIEKERQGD
TVDRTLLKSLLRMLSDLQIYQEAFETKFLVATERLYAAEGLRLMNEHDVPEYLAHVDKRL
QEENERLLHYLDTSTKWSLIHTVEKQLLSEHITSILQKGLSGLLDENRISDLSLLYNLYS
RIKNGLVELCLNFNCYIKKKGKTIVIDPEKDKTMVQELLDFKDKMDNIVNTCFHKNEKFA
NSLKEAFEAFINQRANKPAELIAKFVDCKLRAGNKEATEEELERLLDKIMVLFRFIHGKD
VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINIA
FKQYAGNLQSELVANNLDLTVSILTMGYWPTYPVMEVTLPMEMVQYQDVFNKFYLGKHSG
RKLQWQPTLGHCVLKAWFNQGNKELQVSLFQALVLILFNDSDNLSLEDIKTATNIEDGEL
RRTLQSLACGKARVLQKNPRGRDVADNDRFVFNAEFTNKLFRIKINQIQMKETNEEQKAT
EERVYQDRQYQIDAAIVRIMKMRKTLTHNLLISELYNQLKFPVKPADLKKRIESLIDRDY
MERDKDNANQYNYVA
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggcattgcgatatccagtttttgtatgatagacgggtgaagaaggtggctgcc
accgccgctgccgccgccaccgtcgccgctgccgccgccaccatcgctgccaccgtcgct
accgttgctgtcgccgtcgatcacacggcggtgttggagtacgcgagcgcagctgagtgc
tgcaagctggctgcggccgtgagcattgcccatccggacgaaatcgacgcgattagggtt
gacgagatcatcatgacggatacggcgtctgcagctgccgctgccgccgctgcggctgac
acgcaaaaacgggccaacttttcggcgttgacagtcggtaatccgaacggcgtcagcaaa
atatcgccaagccttacgaatgcaaaacccggttccgcaaagaagctcgtcatcaagaac
ttcagaagtaaacctaaattaccagaaaactatcaagaagagacatgggaaaaattgcag
gaggctgtagttgctatacaaaccagcaaaagtatccgctattctctggaagagctttac
caggcagttgaaaatatgtgtaatcataaaatggcatcaacactttattcaaatttaact
attctgacggaatctcatgtaaaagctaatatcgagcagtttctggcggaatctatggac
agacatatatttttgaagaaaatgaacgaatgttggcaatcgcattgtaggcaaatgata
atgatcaggagtatctttctgtatcttgataggacatatgttttacaaaacccgagcatt
tcatcgatatgggatatgggattacatctattcagattacacattgtgctgaatagttta
gtgcaaacgcgtaccgttgagggtcttcttatgcttatagaaaaggaacgacaaggtgat
actgtagatcgaacgcttctcaagtcactgttgagaatgttgtcggatctacaaatctac
caagaggcctttgaaacgaagttcttagtagctacagaaagattgtacgctgccgaaggt
ctacgattaatgaatgaacacgatgttcctgaatatttagctcatgtggataaacgtttg
caagaggagaacgaacgactgttgcattatcttgatacgtcgactaaatggtcactcata
catactgtagaaaaacaattactgtctgaacatattactagtattttacagaaaggctta
agtgggttattggatgaaaatagaattagcgatttatcattactttacaacttatacagt
cggataaaaaatggccttgtggagctgtgtttgaattttaattgttatattaaaaaaaaa
ggcaaaacgatagttatagatccagaaaaagataaaacaatggtacaggaacttttagat
tttaaagataaaatggataatatagttaatacgtgctttcataaaaatgaaaaatttgca
aatagcttaaaagaagctttcgaggcttttattaatcaaagagcaaataaaccagcagaa
ttaatagctaaatttgtcgactgtaagttacgagcaggtaataaagaagcgacggaagaa
gaattagaaagattattagataagattatggtactctttcgatttattcatggaaaggat
gttttcgaagcgttttataagaaggatttagccaaacgtttgttagtgggaaaatcggct
tctgtagacgcggaaaaatcaatgttatctaaattaaaacaagaatgtggtggtggattt
actagtaaattggaaggaatgtttaaagatatggaacttagtaaagatattaatattgca
ttcaaacagtatgcaggaaacttgcagagtgaattagtggcaaataacctagacctaact
gtatctatacttactatgggatattggcctacatatccagtgatggaagtcactctaccg
atggagatggtacaatatcaagatgtgtttaataaattttatttgggaaaacatagcggt
agaaaattgcagtggcaaccaaccttaggacactgtgtattaaaagcatggtttaaccag
ggtaataaagagctacaagtatcattgtttcaagcattggttttaattctattcaatgat
agtgataacctctcgttagaagatattaaaactgctacaaatatcgaggacggtgaactg
agaagaacactgcaatccttggcatgtggaaaggctcgtgttcttcaaaagaatccgcgt
ggtcgagatgtcgctgataacgatagattcgtatttaacgcagaattcacaaacaaactg
ttcaggattaagatcaatcaaattcaaatgaaagaaacgaatgaagaacagaaagcaaca
gaagaaagagtatatcaagacagacaatatcaaatagacgctgctatcgttagaattatg
aaaatgagaaaaactctgacccataatcttctcatcagtgaactgtataatcaattgaag
tttcctgtaaagcctgcggatttgaaaaaacggattgagtctcttatagatagagactat
atggaacgagacaaggacaacgcaaatcaatacaattacgttgcgtaa
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