Atta colombica: 108689416
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Entry
108689416 CDS
T11098
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
acoc Atta colombica
Pathway
acoc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108689416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acoc03009
]
108689416
Ribosome biogenesis [BR:
acoc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108689416
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_DCAF12
Svf1_C
Motif
Other DBs
NCBI-GeneID:
108689416
NCBI-ProteinID:
XP_018051662
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MTSFKKINTKVFARTGSELTEDNIYWKKYAPPVLIKEFGPIDYIDFSPVEPHYFATTCSV
RVQLYNPITKLATKTYSKFKEAAYGGCFRRDGKLLCVGGEEAVIKLFNISSNSVLRIFSG
HKAAVHRVFFTADDVRVASFSDDKTVALWDIPSEKQLTSFNEHTDYIRAGAVSPVSSDVL
LSGGYDKIVNMYDARTNKKVFSVNHNAPVESLLFLPTGGIFLSAGGSDIKVWDALAGGKL
VAKITQHHKTVTCLKIASNGHRILSGSLDRHVKIYDAGTYKTLHALDYPNAVLSIGISVD
DETVVAGMVDGMISVRRREEDVKDVIKSKRKKVSYRHAGENLHVRSIDVVVHQEVKEVMS
KHDACLRKFQYSKALDCVMMNYVVNKTPHVTVALTQELIRREGLRRALAGRDGKSLVNII
KFLNKYIGNIRFGRVLSHVANVLLDVYEDHLDELSEETRKTFAILSQKLQEEEQLILALT
QLQGSMQMILSGAETSSLPTIKEIQSLEPSNAAQTERDIILNIA
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgtttaagaagataaataccaaagtgtttgcccgaacaggatcggaattaact
gaagacaatatatattggaaaaaatatgcgcctccagttttaataaaagaatttggtccg
atagactacattgacttttcaccagtagagccacattatttcgcaacaacctgctcagta
cgagtacaactgtataatcctatcacaaagttagctacaaaaacttacagcaagttcaaa
gaagctgcatatggaggttgctttcgtagagatggcaagctgttgtgtgtcggtggagaa
gaagcagtgattaaactctttaatatcagttcaaatagcgtgttgcgaatcttttctgga
cacaaggctgcagtgcacagagttttcttcacagcagatgatgttcgtgttgcctcattt
tcagacgataagactgtagctttgtgggacatacctagtgaaaaacaattgacaagcttc
aatgaacatacagattatatcagagccggcgcagtgagtcctgtatcctctgatgtgtta
ctatccggcgggtatgacaaaattgtgaatatgtatgatgccagaacaaataagaaggta
tttagtgttaatcataacgcaccagtagaaagtttactcttcttgccgactggaggaata
tttctgtctgcaggtggttcagatattaaagtatgggatgctcttgcgggtggcaaattg
gtcgcgaaaattacacaacatcataaaactgtaacttgcctgaaaattgcttctaatggt
catagaatactatctggttcgttggacaggcatgttaagatttacgatgctggaacatat
aaaactcttcatgctttggattatcctaatgcggttctcagcataggaatcagtgtagac
gatgaaaccgtcgtagctggtatggtagacggtatgatttctgttagaagacgtgaggaa
gatgtgaaagatgtaataaaatcgaaacggaagaaggtgtcgtataggcatgcaggagaa
aatctgcacgtgcgaagtattgacgtagtcgtgcaccaagaagtgaaagaagtaatgagc
aagcatgatgcctgcttacgaaaatttcaatatagtaaagcgctcgattgtgtcatgatg
aattatgtggttaataaaacgccacatgtcactgtagcgcttacacaggaacttattagg
cgcgaaggtttaaggcgagcattggctggtagagacggcaagtcgctagttaatattatt
aaattcttgaacaagtatatcggcaatatacgttttggaagagtattgtcgcacgtagcg
aacgtattattagacgtttacgaagatcatttggacgaactatcggaggaaacacgaaaa
acgtttgctatactgtcgcaaaaattgcaagaggaagaacaattaattttagctttaact
caattgcaaggttcaatgcaaatgatattgtctggtgctgaaacatcttctttacctact
ataaaagaaattcaaagcttggaaccatcaaatgccgctcaaacagaacgtgatattatt
ttgaatatagcttaa
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