Atta colombica: 108689468
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Entry
108689468 CDS
T11098
Name
(RefSeq) transient receptor potential channel pyrexia-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acoc04040
]
108689468
Ion channels [BR:
acoc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108689468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Spo7
Motif
Other DBs
NCBI-GeneID:
108689468
NCBI-ProteinID:
XP_018051721
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MQEYDPDHIRLILAIENGEFDKANEILTSDSENKYVRPVGTLQVTALQIAAWQGNIDLLN
RLYKKGADINSIDKIGRCALYYAAYNGNTDVTKWLLQHGGYIDVKVGIYLCTKDIPYSSL
TKSYLMGKKLPLPVCWGRTPLHEAIKNNHADVVRVLVEGGADVNVKDERLITPLLLAGSA
VNRDDLNEMTKFVEIVRILVAAKVLVNIIHPDTGTTALHHAAMLGSADATKILLLNGAWP
TYKCKSSGSTPLHIVASTGSIETLMVLLEAMQCHNIDIDTRDQINRTALHKASYQGHREC
IQALISHGANLAAVTKTGVTAVDAIFAHISRPLTFLTDILDSCVRTINNSSLEKYENITV
DFGILTPKHQMQMAVVTAIIAAASDIRQLAILQHPLVETFLRLKWARLRILFFLLILVHF
LFVISLSVYAIIFVHNDADHMVTRRILAICSCILLFHNMIQVILEPKHYLKQLETWLSFI
CAMLSLVTSIAGEFVKCSKEEIKFQHCMHWVLHSISIAILLSWMQMMLLIGRVPMWGYYA
LMFSTVLKNILKVLLAFGYLIVGFALSFAVLFHGNNQFDDFWRAIVKTVVMMMGEYEYNE
LFESNFLSVTSRIVFVVFIMLASIVLINLMIGLAVNDIQGLEKEGHIRRLLKQAEFVAHL
ERVTSHRIFRSNWLHPRLRMLLHSRRDIPTKITLVSRENHFHHFTEVPPKISADLIEALF
LLATKNNNLMDKNIETDDMKLTSILTNLEEQIRELKTYCVYNCRNLTDRRFSKRRGLKRK
PVLKKKCINT
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaatacgatccggatcatatcaggctcatattagcgatcgagaatggggaattt
gataaggcgaatgaaattttaacgagtgatagcgaaaataaatatgtgcgtcctgtgggt
actcttcaagtgacagccctgcagatagctgcgtggcagggcaatatagatttattgaat
cgactctacaagaaaggcgctgacataaacagcatagataaaattggcagatgtgccctt
tattacgccgcatacaatggtaatactgacgtgacaaagtggctccttcaacacggaggt
tacatcgatgtcaaagtcggtatctatttgtgtactaaggacatcccatattcttcactg
acaaaatcctatctgatgggaaagaaattgccgttacccgtatgctggggaagaacgcca
ttgcacgaggcgataaaaaataatcacgcagacgtcgtgcgcgttttggtggaaggcggt
gcggatgtaaacgttaaagacgaacgtctgattaccccattgctcttagcaggaagcgcg
gtgaatcgcgatgatctcaatgagatgactaagttcgtcgagatcgttaggatcctggtt
gccgcaaaggtgttggttaacattattcatccggacacaggtactactgctttgcaccac
gcggcgatgttaggcagtgcagacgcgacgaagatattactgttaaatggtgcatggcca
acatacaaatgcaagagctccggaagcacgcctcttcatatcgtcgcgagtacagggagt
attgaaacactaatggttctacttgaagcaatgcaatgtcataatattgatattgatacg
cgcgatcagatcaatcgtacagctcttcataaagcatcttatcagggccatcgtgaatgc
atacaagctttaatcagtcatggagctaatttagctgcggtgacgaagactggtgtcacc
gctgttgatgctatattcgctcatatttcgcgaccattgacctttttaacagatatcttg
gattcttgcgtacgaacgatcaataattcttctttggaaaaatatgagaatatcacggtt
gacttcggtatattgactccaaagcaccagatgcaaatggcagtggtcacggccattata
gctgcagcttcggatataagacaactggcaatattacagcatccacttgtggagacattt
ctcagactaaagtgggcgagattaagaatacttttctttcttctcatacttgtacacttt
ctcttcgttatttctctctcagtctacgccataatatttgtacataatgacgccgaccac
atggtgactcgaagaatcctagcgatttgttcttgcattcttttgttccacaatatgatt
caagttatattagaacccaagcattatttgaaacaacttgagacgtggctgtcgtttata
tgcgccatgctatccttagtgacatcgatagcgggcgagtttgtaaagtgttcaaaggaa
gaaataaagtttcagcattgcatgcattgggtactacattccatcagtatcgcaattttg
ttgagttggatgcaaatgatgttattaattggcagagttccaatgtggggatattacgca
ctcatgttttctaccgtgttgaagaatattttaaaggttcttctggcgtttggttacttg
attgttggatttgcgctgagttttgctgtgttatttcacggaaacaatcaattcgacgat
ttctggagagctatagtaaaaactgtggtaatgatgatgggcgaatacgagtataatgag
ctattcgagagcaattttctatcggtaacaagcagaatcgtgtttgtcgtcttcatcatg
cttgctagtatcgttctgattaatctcatgatcggtctggcagttaacgatattcaagga
cttgaaaaggagggccacatacgtcgattattgaaacaagcggagtttgtcgcacattta
gaaagggtaacatcacatcgaatttttcgtagcaattggctacatccccgtttaagaatg
ctgttgcactccagacgcgatattcccacaaaaattacgctggtctctcgtgaaaatcat
tttcatcattttacggaggtgcctcctaagatttccgccgatctaatagaagccttattt
ttgttagccaccaagaacaataatttaatggataaaaacatagaaactgatgatatgaag
ctgacttctatactaaccaatttagaggaacaaatccgggaattgaaaacctattgtgtg
tacaattgtcgtaatttgacagatcgaagattctcaaaacgacgtggactcaaaagaaaa
cctgtcctgaaaaaaaaatgtataaatacttaa
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