Atta colombica: 108689503
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Entry
108689503 CDS
T11098
Name
(RefSeq) notchless protein homolog 1
KO
K14855
ribosome assembly protein 4
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acoc03009
]
108689503
Ribosome biogenesis [BR:
acoc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108689503
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
WDR55
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR75_1st
DSE1_N
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
ASA1
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_DCAF12
NLE
Beta-prop_WDR35_TULP_N
Beta-prop_NOL10_N
Ge1_WD40
Beta-prop_DCAF4
CFAP251_N
Beta-prop_VPS8
RMC1_N
WD40_RFWD3
Beta-prop_HPS5
PAC11
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_SPT8
TRM82_WD
Tricorn_2nd
WDR54
Tricorn_N
eIF2A
Beta-prop_RIG_1st
Beta-prop_IFT80_2nd
Cytochrom_D1
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
108689503
NCBI-ProteinID:
XP_018051772
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MSKRKLDDETGTALADVEVKRVLSRFKSDTGEVLPGGLLDLPVDITVDKLQAICNALLQQ
EEPLPLAFYVNNVEVTDVLEKYVGKDFSISEDVVEIIYQPQAVFKVRAVTRCTGSLEGHK
EAVISVAFSPDGKHLASGSGDTTVRLWDIYTQTPHYTCEGHRHWVLCIAWSSCGTKLASA
CKNGLIYLWDPNTGKQMGKALAGHRMWVTSLCWEPYHKNPECMYLASSSKDCDIRIWDTK
RAQTCRVLSGHTKSVTCVKWGGSGLIYSASQDRTIKVWRAEDGVLCRTLEGHAHWVNTLA
LNVDYVLRTGPFQLGLTANKTDSPLEYAKKQYEIVGEEKLVSGSDDFTLFLWKPEKEKKP
IARMTGHQQLINDVKFSPDGRLIASASFDKSIKLWESNTGIYIASLRGHVQAVYSIAWSA
DSRLLVSGSADSTLKVWSIKTKKLNQDLPGHADEVYAVDWSPDGLRVASGGKDKVLRLWQ
N
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaagaaaactcgatgacgagactggcaccgctctggcggatgttgaggttaaa
agagttctgtctcgttttaaatcggacactggcgaagtcctacctggtggcttgttggac
ctgccagttgatatcactgtggataaattgcaagcaatttgcaatgctctgctgcaacaa
gaagaaccgttgcctctagcattttatgtaaataatgtagaagtcacagatgtattagag
aagtatgttggtaaagatttcagtatcagcgaggacgtagtggagattatatatcaacca
caagcagtatttaaagtcagagctgtcacgagatgtaccggatctttagaaggtcacaag
gaagcagttatatccgttgcgttttcaccggatggcaaacatttagctagtggttctggt
gacacgacagtcagattgtgggatatctatacacaaacgccacattatacatgtgaaggt
catagacattgggtcttgtgcattgcctggtcgtcctgtgggactaagctagcatctgca
tgtaaaaatggcttgatttatttatgggatcccaacactggcaaacaaatgggaaaagcc
ttggcaggacacagaatgtgggttacatctctatgctgggaaccctaccataagaatcca
gagtgcatgtatttagcgagttcgtctaaggactgcgacatacgaatttgggacacaaag
cgagcacaaacctgtcgggttttgtctggacacacgaaaagtgtgacctgcgttaagtgg
ggtgggagtggtcttatttattctgcttctcaagacagaactatcaaagtgtggagagcg
gaggacggtgtattatgtagaaccttagaaggccacgctcattgggtaaacactttagcc
ttgaatgtcgattatgtacttaggactgggccttttcaattgggattaactgcaaacaaa
acagacagtccattagaatatgcaaaaaagcagtatgaaattgtaggtgaagagaagctt
gtatctggatctgatgattttacattgttcctatggaagccagaaaaagagaagaaacct
attgcaagaatgacgggccatcagcagcttatcaacgatgttaaattctcgccagatggt
cgtttaattgcgtctgcatccttcgataagtccattaaactgtgggaatctaataccggc
atatatatcgcttcattaagaggtcatgttcaagcggtttattcgatagcctggagcgct
gactctcgtctgctggtcagtggcagtgcggattcaactttaaaggtttggagtataaaa
actaaaaaattaaatcaagatttacctggtcacgctgatgaagtttatgcagtcgattgg
tcacccgatggtttacgagtcgcttcaggtggaaaagacaaagttttacgactatggcaa
aattga
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integrated database retrieval system