Atta colombica: 108689999
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Entry
108689999 CDS
T11098
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
acoc Atta colombica
Pathway
acoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108689999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108689999
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108689999
mRNA degradation factors
5'-3' decay
Decapping complex
108689999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
DUF759
Motif
Other DBs
NCBI-GeneID:
108689999
NCBI-ProteinID:
XP_018052517
UniProt:
A0A195B614
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MTDRTELRMNVAALKRVDPYVKDILETATHVALYTFNADENEWEKTDIEGALFLYSRNGE
PYNSILIMNRLNTNNLVEPVAPGLDLQLQEPFLLYRNSRCNIYGIWFYEKEECVRIANML
NKLLKECEENRKITNKPLLKAKKTSGPNVNNVDIFSMLSKAQEDFNTSRGSGGGGEGDGG
NTIVGSKSPSITPMIDNISGPLAAPLGPDVTSQSVMDFFAKAKVNTGHFKAGDQPTPGST
VVVESKPLLARLMSHPAAHTLEHIEKQQRSVTPQPSHQSQSTTIPSTNKSKKRSKATLQQ
ESIISTSAPISQDLLPLPVTQNVNDSNASTGFLRIQSPTNVTSSTLRNHQVSNITNTNNA
NPLASLFAHASGSTSSDDIIPAASTLSGRGSAPALIPPVMFAAPSPPESLNRPLEPLTRN
QLLQAFNYLLKSDPDFINKLHEAYVKSFGEILS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgacggatcgaaccgagctgagaatgaacgtggctgctttgaaacgagttgatccctac
gtgaaggatattttggaaactgcgacccacgtcgctctgtatacatttaacgcggatgaa
aatgaatgggaaaagaccgacatcgagggtgctctgtttttgtactcgaggaatggcgag
ccatacaacagtattctcataatgaacagattgaatacaaacaatctagtggaaccagtt
gctccaggtttagatttacaactgcaggaaccatttctgctctatagaaattctagatgc
aacatctatggtatttggttttatgaaaaagaagaatgtgtacgcatcgcaaatatgtta
aataaacttctgaaagaatgtgaagaaaatcgcaaaatcactaacaaaccgttactgaaa
gctaaaaagacctctggacccaatgtaaataacgtggacatattcagcatgcttagcaag
gcacaagaggactttaacacgagcagaggtagcggcggaggtggcgaaggcgatggcggt
aacacaatagtaggatcaaagtctccatcgattacacccatgatcgacaatatttctgga
cctttagctgctcccttaggacctgatgtcacttcccaaagtgtaatggacttctttgct
aaagccaaggtgaatactggacatttcaaagcaggcgaccaaccgactccaggaagtacg
gttgtggtcgaaagtaaacctttacttgcacgtttaatgtctcatccggcagcgcatact
ttagaacatattgagaaacagcagagatctgtgacaccccaaccatctcatcaatcacaa
tcgacaacgattccatccacaaacaagtctaaaaaacgaagtaaagcaactttgcaacag
gaatcgataatatccacatcagcgccgatttcccaagatttgctgccactacctgttact
caaaatgttaacgattcaaatgcgtcgactggattcctcaggatacagtcgccaaccaac
gtaacgtcttctactttaagaaatcatcaagtttccaacattactaataccaataatgcc
aatccacttgcgtcattattcgctcatgcttccggaagtacgtcatcagacgatattatc
ccggcagcgtctacattgtcaggaagaggttcggcaccagcattgataccacctgtgatg
tttgccgctcctagtccacctgaatccttaaatcgaccgttagagccactaacgaggaat
caacttttacaagcattcaattatttgttgaaaagcgatccggatttcatcaacaaactt
cacgaggcctatgtcaaatcgtttggagagatactttcttaa
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