Atta colombica: 108690096
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Entry
108690096 CDS
T11098
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acoc03016
]
108690096
Enzymes [BR:
acoc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
108690096
Transfer RNA biogenesis [BR:
acoc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108690096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
Methyltransf_32
zf-U11-48K
Motif
Other DBs
NCBI-GeneID:
108690096
NCBI-ProteinID:
XP_018052705
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MMDSNHCMHFVERKKRFCRMTVQKGHQYCGEHQRDLAGSNIGNERVPCPLDPTHTCYRSK
LTKHLGVCNVKRRLDAQPTFVVEGTNLDDESIETPPRVPLSQLDVSIIRMVIRKIHAAYG
MIKLSAFKPQGLHVKYKLNDETSGNKVRKHLLQNASLLGHLEQANLVQDDTCFIEFGAGK
AQLTYWLGQIIKDKSNSCILLIDRSSHRHKSDNKLKREESHFAVKRIRADIADLQLNQIS
EIQPIKYKVGIAKHLCGTATDLAIRCLVKSMNSEPKVNVRGLILAFCCHHKCEYSSYVGR
KYLQQCGFTADEFPVLCSIVSWATCGCRLKSNINLPSDATSDTANKISSKLDEREVIGRK
AKTLLNWGRLVFLKSVGFQAELLYYISTDISLENMCVVATRECSS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgatggatagcaatcactgcatgcactttgttgagcgcaagaagcgattctgccgcatg
acagtgcaaaaaggtcatcaatactgcggcgagcatcaacgggatctcgctggctccaac
atcgggaatgagagagtaccatgtccgctggatcccacacatacatgctacagatccaag
ctgactaagcacttgggcgtgtgcaatgtcaaacgaagactggatgcacagccgacgttc
gtggttgaaggaacaaacttggatgatgagtctattgagacgccgccgcgcgtgccactg
tcgcagctcgacgtatccatcataagaatggtgataaggaagattcatgctgcctatggt
atgattaaattatctgcattcaagcctcagggtttacatgtaaaatacaaattaaatgat
gaaactagcggcaataaagttagaaagcatttgctccaaaatgcatctctgctcgggcat
ctggagcaagctaatcttgtgcaagacgacacttgtttcatcgaatttggagctggaaaa
gctcagttaacatattggttgggacagattataaaggataagtcaaactcttgcatatta
ctaatcgatcgttctagtcatcggcacaaaagcgacaataagcttaagagagaggaaagt
cacttcgcagtaaaaaggatacgcgccgatattgctgatctgcagctgaatcaaatctct
gagatccagccgatcaaatacaaggtcggcatagcaaagcatctctgcggaacagccact
gacttggcaattcgttgtttagtaaagtcgatgaatagcgaacccaaggtcaatgtacgc
ggtctaatcctcgcgttttgttgtcatcataagtgcgagtactcgtcatacgtgggcagg
aagtacttgcaacaatgtggcttcaccgcggacgagtttcctgttctatgcagcatagtc
agttgggcgacttgtggctgtcgtttaaagagcaatattaatttgccaagtgatgcaact
tcagacactgctaacaaaatttcctcgaaattagacgaacgtgaagttatcgggcgcaaa
gctaaaacactgctgaattggggtcgtttggtctttttgaagagcgttggatttcaggct
gagctgctttattatatttccaccgatatctcgttagaaaatatgtgtgttgtggctact
cgagaatgttcgtcataa
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