Atta colombica: 108690108
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Entry
108690108 CDS
T11098
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoc03021
]
108690108
Transcription machinery [BR:
acoc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108690108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_2
ResIII
DEAD
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
108690108
NCBI-ProteinID:
XP_018052722
LinkDB
All DBs
Position
Unknown
AA seq
1964 aa
AA seq
DB search
MGVKPGDKTQVHQQYGCQYKFDACNMSFSPRNLTSVSVVSHYARHDVIFVCPAMRKWQRG
SVEAETRLPKQFLRKQFRLDRLFILLETGTNAVTKRAAAQQLGEAQRLHPHDLHHLLARV
STLLKSSQWDTRISAAHAVQAILAQVPPWNPQPIKKEVSTDESEVKRKPPTTRLNLKSFD
MSRVLARSSHLTGSEGSEYDLTVSEGEQLSLPNQQEKLAAKLGFHPRLMGVDDLFTVEDL
TLVQAPCITQTATIPVDDSEGLLMSRREMNRAKRKARQSVSKQRSREPDDHRANNCDDNS
NSTNVQSPIGEPAIKKIILEDTISSDTGSKCNISNEQVNGVPDSTGCWPDSIVDWPLESF
AESLCQDLFSQKWEVRHGAATALRELIRLHGKGAGKCTDQTPEEMQESHYEWVIDAALRL
LCVLGLDRFGDFVSDQVVAPVRETCAQALGSLFLLVPGGPNTKDTNGVFPGIFSVILKLL
EHNEWEARHGAFLALKYLLAVRDDLLDEVLPQVFPAIMQGLSDPVDDVGAAAASALIPVA
HALPRLLKSTELETIVIRLWELLKEQDDLAAACNTFMGLLAAILSLPAAHACLTPQPLSQ
VLPRLWPFLSHSSSSVRKATLQTLQTLTGNDSNYSGNKKERWGEGGGLVLQETLRHVFQC
VLIEHISTIQDVAERVWENLVVQSDLELLLHAACPHVSTWLCLAMQPEHVPFNPNLLMTV
VSSIKGTKNNQMVAYCDGQLDINSGNSNINANAKSLSELKMYIGGIETVALNVRKANVIQ
ARCRASRMLGLLSHYVVQPAPGVIYPPDVPSPALCYAKVLLAHLNSRSALQRTVVGLTMS
SWATVDPLRIPTIPDILSDRLLACLNECMYYDEIAASFTRLLHESHDYIATLKHYKLMIS
FEIDSSSVMTLDQIAALAKRRLPAICTVGTNAGGTENISSCSISSRLKPKLMDSLEERRR
ALDIGATTMAAQQQSLHVMSMAALAGAATMLHILPQSPQPLNPLVKPLMEAIKREENEEL
QKLAAKHLSHLIELCIDRKPSPNAKISTNLCTFLCSDLEFTPRVCCDTEIYDGILTLNNR
QKHAERIAYNRGASSGLSSGRGPGRPPTTEIPLEELLACEEPEAKAARTRRRGATFALTA
IATLFGAQLPDRLPQLWNLILPNTLKDETKQDNIQEDEGNLLIVGLQVLEIMAPSLDKSL
LPPVLEVLPRLCSLLTHSYKAVRHMTSRCIAILATLDTEKTMVHILRSVIPLLDTTGSEK
RCSSGIVAPNKVDSVRQGAAEALTCIVESLGVHVVPYAVLFMVPLLGRMSDQNQSVRLVC
SATFATLVQLLPLDPGAIADPPDLVQEKAQERKFLDQLLNPHNIPDTELPISVAAELRSY
QRQGLNWLNFLNRYHLHGVLCDDMGLGKTLQTLCILALDHHRNSQAPTSLVVCPPTLTGH
WVYEAEKFFKIKDLSVIQYAGTPQDREKLRLRVPHHRLVVASYDIVRKDIEFFEAHQWNY
CVLDEGHVIKNGKTKSAKAMKRLHANHRLILSGTPVQNDVLELWSLFDFLMPGFLGSEKQ
FAAKYSRPILACREPKAGPKEQEAGALAMEALHRQVLPFLLRRNKEDVLQDLPPKITQDY
YCDLSPLQRILYEDFRTRHSALTNNSSSSNDSQSNVFEALRYLRNVCNHPKLVLSQGHPL
YRTVCDMLKQQQSTLAEIEHGAKLLALKQLLLDCGIGQQQQQQTRNSSVAVNLTAESTHS
QEQQLVSQHRALIFCQLKAMLDIVEEDLLRTHLPTVTYLRLDGSVPAAHRHSIVTRFNAD
PSIDVLLLTTQVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLIT
RSTVEEKIMGLQKFKLLTANTIISTENASLETMATDQLLDLFSLDNGKEKRMDHQEDTIS
SKLPGLSGISRSVLDILPELWEQQQYDDEYDLDSFLSTLKADSQ
NT seq
5895 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaaaaccaggggacaaaactcaggttcaccagcaatatggctgtcagtataaa
tttgatgcttgtaacatgagtttctctccaagaaatttgacaagcgtaagcgtagtttcg
cattacgcgcggcatgatgtgattttcgtatgtccggcaatgcggaaatggcaacgcgga
tcggttgaagccgaaacaagactgccaaaacaatttttgagaaaacagtttagattggat
agattattcatattgttggagactggaacaaacgcagttaccaagagagcagctgcacaa
caattgggagaagcacagagattacatcctcatgatctacatcacttattagcaagagtt
tctaccttattaaaatcttcacaatgggatactcgaatatcggctgcccatgctgtacaa
gctatacttgctcaagttcctccttggaacccacaaccaattaaaaaggaagtctctaca
gatgaatctgaagtgaaacgcaagcctcccactactagattgaatttaaagtcttttgat
atgagcagagttctagctcgtagttcacatcttactggatctgagggcagtgagtatgat
ttgactgtatcagagggagaacaattgtcacttcccaatcagcaagaaaaattagctgca
aagctaggttttcatccacgtttgatgggcgttgatgatttatttactgttgaagatttg
actctagtacaggcaccatgtataacacaaactgctactatacctgttgatgactctgaa
ggattgttgatgagcagaagagaaatgaatagagcgaaacgcaaagctcgtcaatcagta
tcaaaacaacgatcgcgcgaaccggatgatcatcgcgctaacaattgcgatgacaattca
aattcaacgaatgttcaatctccaattggtgaaccagcaattaaaaaaattatactagaa
gacacaatctcatcagatactggatcaaaatgcaacatatctaacgaacaagtaaatgga
gtaccagatagcactggatgctggccagattcaatcgtagattggcctttagaatctttt
gcagaaagtctttgtcaggatttatttagtcaaaagtgggaagtgcgacatggagcagca
acagctttgcgagaacttataagacttcatggtaaaggagcaggcaagtgtacagatcaa
actccagaagaaatgcaagaaagtcattatgaatgggtgatcgatgccgctttacgatta
ttgtgtgtattaggacttgatcgatttggagattttgtatctgatcaagttgttgctcca
gtacgagaaacatgtgctcaagcattaggatcgctcttcttattagtacccggtggtcca
aataccaaagatacaaatggtgtttttcctggaatattttctgtaattctcaaactgttg
gaacataatgaatgggaagcgagacacggtgcatttcttgctttaaaatatttattggcc
gtacgagacgatctgttagacgaagtattgccacaagtgtttcctgctatcatgcaagga
ttatccgatcctgtcgatgacgtaggtgcagctgccgcaagtgcacttataccagtagca
cacgctcttccgcgattattaaaatcaacagaattagaaactattgtaatacgtctttgg
gaattattaaaagaacaagatgacttggctgcagcttgtaacacttttatgggtctgttg
gctgcgatactttcattgccagcggcacatgcttgtttaacgccccagccattatcacag
gtattaccacgtttatggccatttctcagccattcaagttcaagtgtacgtaaagccacg
ctacaaacactgcaaactttaactggaaacgatagcaattatagcggaaacaagaaggaa
cgatggggtgaaggtggtggattagttttacaggaaacattgaggcatgtatttcagtgt
gtgttaattgagcacattagcacgatacaagatgtggccgaacgtgtctgggaaaatcta
gtcgtgcagagtgatctcgaattattgctacatgcggcgtgccctcatgtcagtacatgg
ctatgccttgccatgcaaccagaacatgtgccattcaatccaaatttgttgatgacagtt
gttagttctattaagggcacaaagaataatcaaatggtcgcctactgtgacggacaattg
gatattaatagcggaaacagtaatattaatgcaaatgcgaaatcgttatctgaattgaaa
atgtacattggtgggattgaaacagtagcgctgaatgtacgaaaagcaaacgtgatacag
gctcgttgtagagcgtctcgtatgttaggattattgtcgcactatgttgtgcaacctgca
ccaggtgtcatttatccaccagatgtgcctagtccagcgctttgttatgctaaagtgcta
ttggcacatcttaattcgcgatcggcgctgcaacgtactgttgtggggcttacaatgtct
agttgggcgactgtagatccattgagaatacccacaataccagatatactcagtgacaga
ttattggcttgtttaaatgaatgcatgtattacgatgagattgcagcttccttcactcga
ctgctgcacgaaagtcacgattacattgcaaccttaaaacattataaattaatgatatca
tttgaaatagattcatccagcgtgatgactcttgatcagatcgctgcactggctaagaga
agacttcccgccatttgcactgttggaacaaacgcaggaggaactgaaaatattagtagt
tgttcaatatcttctagattgaaacctaaattaatggatagcttagaagaaaggaggcga
gcattagacatcggagcgactacgatggcggcacaacaacaatcgttgcatgttatgtca
atggctgcgctcgctggtgctgctacgatgttacatatccttcctcaatctcctcaacca
cttaatccattagtaaaaccgttaatggaagctataaaacgtgaggaaaatgaggaactg
caaaaactggctgcaaaacatttgtctcatctaatcgagctttgtatcgatagaaaacca
tctccaaatgcaaagatttctaccaatctatgtacattcctatgttctgaccttgaattt
acaccacgagtatgttgcgacactgaaatttatgatggaatactcactttgaataataga
caaaaacatgctgagagaatagcatataatcgtggtgcaagtagtggactcagcagcggt
agaggtcctggtagaccaccaacaactgagattccccttgaggaattactcgcttgtgaa
gaaccagaagccaaagctgctagaacacgtcgtcgcggagctacatttgcattaacagct
atagctactctcttcggtgctcaattacctgatcgcttacctcaactatggaatttgatt
ttaccgaacacactaaaagatgaaaccaaacaagataatatacaagaggatgaaggaaat
ttattaattgtcggtctacaagtattagaaatcatggcaccaagtttggataagtctttg
ttaccgcctgtgttagaggttttaccacgattatgcagtctactaacgcattcatacaaa
gctgttagacacatgacctcgcgatgtatagctatattagctactctagatacagagaaa
acaatggtacacatattacgcagtgttataccactcttggacacaactggcagtgagaag
agatgttcttcaggcatagtggcaccgaacaaagtcgattccgtacgccaaggagctgcg
gaagctctaacttgtatcgtcgaaagcttaggcgtacatgtggtgccatatgcagtactc
tttatggtacctttattgggacgtatgagcgatcaaaatcaatctgtaagactagtttgt
agcgcaacttttgctacgctcgtacagttgttaccgctagatcctggcgcaattgcagat
ccaccagatctagtacaagaaaaggcacaagagagaaagtttttggatcaacttttaaat
cctcataatattcctgatacggagctaccgatttctgtagccgcagaattacgttcgtat
caacgacagggtttaaattggctcaattttctgaatcgttatcatcttcacggagtgttg
tgtgatgatatgggacttggaaaaacactacaaacgctctgtatcttagcattggatcac
catcgcaattcacaggcaccgactagtctagttgtatgcccaccaactctaaccggtcat
tgggtatatgaggctgagaaattcttcaaaataaaggatttgtcagttattcaatatgct
ggcacgccacaagatcgcgagaaattgcggcttcgagtgccacatcacaggctcgtagtt
gcgagttatgatattgtacgaaaagacattgaattcttcgaagcgcatcaatggaattat
tgtgtgctcgatgaaggccatgtaataaaaaacggcaaaacgaaaagcgctaaagctatg
aagcgattgcatgctaatcacaggcttatattatccggcacacctgtacagaatgatgta
ctcgaattgtggtctcttttcgattttttgatgccaggtttcctcggcagcgagaaacaa
tttgccgctaaatattcccgtcctattttggcctgcagagagccaaaagcaggaccaaaa
gaacaagaggctggtgctttagctatggaggctcttcacagacaagtattgccgttctta
ctgagacgaaacaaagaagacgtgctgcaagatttaccacccaaaatcacgcaagattat
tactgcgatttatcgcctttgcaacgcatactttatgaggattttcgcactcgtcattcc
gctctcactaacaattcctcgtcttctaacgattctcaaagtaacgtgttcgaagcgcta
cgatatttgcgtaacgtgtgcaatcatccaaaattggtgttaagtcaagggcatccatta
tatcgaacagtgtgtgatatgttgaagcagcaacaaagcactttggcagaaattgagcac
ggcgccaagttacttgcattgaaacaattgctattagattgtggtattgggcaacagcaa
cagcagcaaactcgcaattcctccgtcgctgtgaatcttaccgcagaaagcactcattcc
caggaacaacaactagtgagccagcatcgtgctctaattttctgccaattgaaggcaatg
ttggacattgtggaggaagatctacttcgcacgcatctgccgacagtaacatatctccgt
ctagatggcagtgtgccggcggcgcacagacattctatcgtaacacgtttcaatgctgat
ccatcgatagatgttcttctgttaaccactcaagtcggtggtcttggattaaacttgacg
ggagcagatacggtcatattcgtggagcacgattggaaccctatgaaagatctccaagca
atggaccgcgcgcaccgtataggacagaagaaagtagtcaacgtataccggttaattact
agatcgacagtagaggaaaagatcatggggctccaaaaattcaaacttctcactgcaaat
acaataatatcgacagagaatgcttctttggaaaccatggctactgaccaattgttggat
ctgttctcgttggataacggaaaggaaaaaaggatggatcatcaagaagatactatttcg
tcgaaacttcctggcctatcaggtattagccgttctgtgctagatatcctacctgaactc
tgggaacagcagcaatatgacgacgaatatgatctcgactcatttttgtctactctgaag
gctgatagccagtaa
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integrated database retrieval system
