Atta colombica: 108690280
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Entry
108690280 CDS
T11098
Name
(RefSeq) F-box/LRR-repeat protein 7-like isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoc04121
]
108690280
Ubiquitin system [BR:
acoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108690280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF7885
F-box
F-box-like
LRR_At5g56370
LRR_6
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
108690280
NCBI-ProteinID:
XP_018052976
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MMNDTLELDYAEMLRYIGLVVSDDCLSSEMIDGVPIRKLFISNLAERTTFKDLRDYFSMY
GNVESCYLRRNHGKSNYAFVTFTKVADAITAMQDGSRKRIRLHNRDLRVMAADSWHQPDS
MEQRLYNVGKELNKISERKEQYVHKYLQNDTENVSIHMLNDDCLRHIFLFLPIVDRVRIE
IVCKRWRDLSQDSWHMIKTLDLSPSTWGFSHTHMIHTALLRKILLKCGRFLTRIDLDEPL
HYLSQSTLTIIGKFCPNLTCINITALTVCASGIRTLANNCRNIIKFCLGPSTYSCDNELK
YLFKLNQNLECLVITRNNILGKSLLCLPEQTMHTIILDRCDYLQDNHLSMALKKLENLTH
LVINECVGIAKHTLEIISQHCKNLRILELNGNFPSAQTADMLYLVHLVNLHDLKITYNPK
VSDDFLTDLVQHCQQLTNIDITGCCNVSDAGLAAIATLIRLEKLVVSYIHQVTDEGLKNM
CGLKELECRRCPFSDRGITMLIKSSPQLKLLDLSGCRYIKDSTLEVAKDACSNRTNNVML
KMIIGGTAIFDLFGLERLPPLLHIVNVDLSDLSSVSTMYLVDDLESWHDEDSDYTEYSDY
TEYSD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacgatactttagaattggattatgctgaaatgcttcgttacataggtttagtt
gtatcggacgattgcttaagttcggaaatgatagacggtgtaccgatacgaaaattattt
atcagtaatttggctgaaaggacaactttcaaggatttacgtgactacttttctatgtat
ggaaatgttgagagttgctatttacgtagaaaccatgggaaaagcaactatgcgttcgtc
acatttaccaaagtggcagatgcaataacagcgatgcaagatgggagtaggaaacgaata
agattgcataatagagatttaagagtgatggctgcagattcttggcatcaacctgacagt
atggaacagagattgtataatgtaggaaaagagttgaataaaatttctgaaagaaaggaa
caatacgttcacaagtatctgcaaaatgatactgaaaatgtatccatccatatgctgaat
gacgattgcttaagacatatcttcctatttttgccaatagtagacagagttcgtatagag
atagtttgcaaacgctggagagatttaagccaagattcatggcatatgataaaaacattg
gatctctcaccttctacatggggtttctcgcacacccatatgattcatacagctttactt
cgtaaaatattgctgaaatgtggcagattcttaacgcgaatagatctagatgagccactt
cattatttaagtcaaagcacattaactattattggaaaattttgtcctaatcttacgtgt
atcaatattaccgcattaacagtttgtgcatcaggtatacgtacattagcaaataactgt
agaaacataatcaaattttgtttaggaccatccacctacagttgtgataatgaattaaaa
tatctcttcaagttaaatcaaaacttggagtgtcttgtgataaccagaaataatattttg
ggtaaatccttattatgtttgccagagcaaactatgcatacaattatattagaccgctgc
gactatcttcaggacaatcatctttcaatggctctgaagaaacttgaaaatttgacacat
cttgtaataaacgaatgtgtcggcatagctaaacacacgttggaaatcatcagtcaacat
tgtaaaaatcttagaatattggagcttaatgggaactttccctccgcacaaacagcggac
atgttatatttagtccaccttgtcaatctgcatgatttaaaaatcacatataatcctaaa
gtatcggacgatttccttactgatttagtacaacattgtcaacagcttaccaacatagat
attacaggttgctgtaatgtgagcgatgccggattagcggctatcgctacgttaataagg
ctagaaaaattggtcgtcagttatatacatcaagttactgacgaaggtttaaaaaacatg
tgtggcttgaaagaattggagtgtcgaagatgtccatttagcgatcggggtataacaatg
ctcataaagtcctcgccccagttaaaattgttagatctctccggatgtagatatatcaag
gattccaccctcgaggttgctaaagacgcttgtagcaatcgaactaataatgtaatgttg
aagatgataattgggggaacagcaattttcgatctctttggtttagaaagactacctccg
ctattgcatatagttaatgttgatttgtctgatcttagcagtgtgtctactatgtatctc
gtggatgatttggaatcttggcacgatgaagattcagattatacggaatattccgattat
acagaatattccgactag
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