Atta colombica: 108690419
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Entry
108690419 CDS
T11098
Name
(RefSeq) transcription factor Sox-2-like isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoc03000
]
108690419
Transcription factors [BR:
acoc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108690419
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
TFIIA
CSRNP_N
DDHD
Motif
Other DBs
NCBI-GeneID:
108690419
NCBI-ProteinID:
XP_018053194
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MHTMETDMKGGSLHAQMPPHPHQGVSPMGHHTGMSPYGSLGSIVHSSALSGSPPSAGGLG
LGLQHHHQTSQHHYAMSAAAVAAAAVQQQQQQQQQSMHAMAVQQSAQQQQHHAHQQSQQQ
QSQSQQHHQANNHSNPNNPNNPNNSSNAKNNNMDRVKRPMNAFMVWSRGQRRKMAQENPK
MHNSEISKRLGAEWKLLSEGEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLIKKDKF
QLGGAVAGVGGMLGVDQRQVGTSGGPQQPQLPRDVYQMPNGYMPNGYMMPDPTTYQQHVA
YSSHMSGAATAASTVAYPRYDSMGHHIGGSSPSPINMNGYGGYGGYGATVPGGSPSPYHQ
AQTGSQISSSHSPSGSSIKSEPTSPASGGIHTPTPTGGPTTTGAAGPAGQVKREYMGQQQ
ASQQASQGDLRQMISMYLPQGIEQGVAQHGGSVYPPGPSPDSLTQHHTMQPISHMSDSDR
KMLNPETGCYSESVRAWDWNATGNVRVQESWPT
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcacacgatggagacggacatgaagggcggcagtctgcatgctcagatgccaccgcat
ccacaccaaggtgtatcgccgatgggtcatcatacagggatgtctccttatggatcttta
ggctcgatagttcatagctctgcactgtcgggaagtccacccagcgcgggtggcttgggt
cttggtcttcaacatcatcaccaaacttctcaacatcattacgcaatgtcagctgccgcc
gttgccgccgcggccgtacaacagcaacaacaacagcagcaacagagcatgcacgcaatg
gcggtccagcagagcgctcagcaacagcaacatcatgctcatcagcaatcgcaacagcaa
caatcgcaatcacagcagcatcatcaggctaataatcatagcaatccgaataatccgaac
aaccccaacaattcttctaacgctaagaataataacatggatcgtgtaaagaggccgatg
aatgccttcatggtatggtcgcgtgggcaacgacgcaagatggctcaagaaaatcctaaa
atgcacaattctgaaatatcgaaacgtcttggtgctgaatggaaacttctcagtgaagga
gaaaagcgtccgtttatcgatgaggcgaaacggctgcgcgctgttcatatgaaggagcat
cctgattacaagtatcggccgcgccgcaagacaaagacgctcataaagaaagacaagttc
cagctcggcggagcagttgctggagtcggcggaatgctcggagtggatcaacgacaagta
ggcaccagcggaggaccacagcaaccgcaattgccgcgtgatgtatatcagatgcccaat
ggatacatgcccaacggttacatgatgcctgatccgacaacgtatcaacaacacgtcgca
tatagcagtcacatgagtggcgccgcaaccgctgcctcgactgtggcctaccccaggtac
gattccatgggacatcacatcggtgggagcagtcccagccctatcaacatgaacggttat
ggcggatacggcggatacggtgctactgtacctggcggatcaccatcaccttaccatcag
gctcaaacgggttctcagatatccagtagtcatagtcctagtggcagcagcataaagtcc
gagccgacgagcccggcgagtggtggcatacacacgccgacgccgacgggcggcccaacg
acgacgggcgcggctggtcctgccggccaggtcaagagagaatacatggggcaacagcaa
gcgagccaacaggcatcgcaaggcgatctccgacagatgatctcaatgtatctgccacaa
ggcatcgagcagggagtcgcgcaacacggtggaagcgtctatccgccgggtccatcacct
gattctttgacgcagcaccataccatgcagccgatttcacacatgtcagatagcgatcgt
aaaatgttgaacccagagactggctgctactccgaatccgtacgagcatgggattggaac
gcgacgggcaacgtacgcgtgcaggaatcctggccgacgtga
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integrated database retrieval system
