Atta colombica: 108690564
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Entry
108690564 CDS
T11098
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
acoc Atta colombica
Pathway
acoc03010
Ribosome
acoc04120
Ubiquitin mediated proteolysis
acoc04137
Mitophagy - animal
acoc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
108690564
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108690564
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108690564
04137 Mitophagy - animal
108690564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
acoc03011
]
108690564
04121 Ubiquitin system [BR:
acoc04121
]
108690564
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acoc04147
]
108690564
Ribosome [BR:
acoc03011
]
Ribosomal proteins
Eukaryotes
Small subunit
108690564
Archaea
108690564
Ubiquitin system [BR:
acoc04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
108690564
Exosome [BR:
acoc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108690564
Exosomal proteins of colorectal cancer cells
108690564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
DUF2604
Plexin_RBD
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
108690564
NCBI-ProteinID:
XP_018053420
LinkDB
All DBs
Position
Unknown
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKNYSTPKKIKHKKKKVKLAVLKYYKVDENGKIHRLRRE
CPMEQCGAGVFMAAMEDRHYCGKCAYTLVFNKPEEK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatctttgtgaaaactcttacggggaagactatcacccttgaggttgaggcatcg
gatacgatagaaaatgttaaaacgaaaattcaagataaggaaggaattccaccagatcag
caaagattgatctttgccggtaagcaattggaagacggcagaactttgtcggattataat
atccagaaggaatctactttacacttagtgctgcgcttgcgaggcggtgccaagaaacga
aagaagaagaactattctactcctaaaaaaatcaagcataagaagaagaaggttaagtta
gctgtgctgaaatattataaggtagatgaaaatggaaaaatccaccgtttgagacgagaa
tgccctatggaacagtgcggcgctggtgtattcatggcagcaatggaagatcgtcattac
tgcggcaaatgcgcatacacgcttgtattcaataaaccagaggaaaaataa
DBGET
integrated database retrieval system
