Atta colombica: 108690898
Help
Entry
108690898 CDS
T11098
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
acoc Atta colombica
Pathway
acoc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108690898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoc03000
]
108690898
Transcription factors [BR:
acoc03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
108690898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
108690898
NCBI-ProteinID:
XP_018053922
LinkDB
All DBs
Position
Unknown
AA seq
1009 aa
AA seq
DB search
MGQSDDIEDSMYGRHQDLCQKLNMDAAAASEAWKSYETIRQNYTLEGDQLHWIGCAVYVA
CRKFSIPTVGRPGTNVEGNCVSLTRLLQLCNLPLIQFFTKSKSWADMANMPQDFRARIEK
LEANFSVSMVIFKKYQPIFADIFKDPREDTSKPHRSRRHKAVPCTPTRVFEFCWTLFICI
KGAIHDISDDLVNSYHLLLVCCDLIYSNALLSNRKDLLNPNFPGLPTNFDDDNYTPPQAA
NCIVNLLCERHDAIAVEAKAIKEYCMKNYINKLFNEKILRGDQSNFSGMLESLNFDGNNK
AINKSYEQRMLSVGDFDERIFLGHNANENIGSPTQMMNIDDFHERLQMQREQHAGQIQYL
APPTPLTGRKYLRSKDMSNITPVTTATQSVIKLQALIAGQSAPSESLLQILNNCSQDVKS
SLEAKVKQIGEQFCANYNNNANITNVNDGSTSDFGKKRLLMGQTLFYKLLEMILNDEKRK
KPNDDITNLLLNAVFIQCLFACCLEIVIYSYKSNDKVFPWILKALNLDAYYFYKVIEIIV
RAEDQLSRDVVKHLNHIEEKILESLAWQSDSPLWQTIESLLDGVPSCEEVSLPGTLETAD
PNAPGQPVLRRIALDRERTQHDVQQSPISSASERFQSPVPASGVAKKRLFSETRVTGQSV
LRVGQSVLSTNRMLVDNGHRILLLPEQIVVSKPSSTQALNNSTQATNKDAAKPKRTGSVA
LFFRKFYNLACVRMQDLCNSLEISDNDKKKIWTIFEYSVKERTKLMKDRHLDQILMCAIY
VICKLVRIERNSFTEIMRCYRLQPQAESHIYRSVLIEKVSNDGDSKTSSNERSEDNSMSV
TENVTPPTPTNMAGTSQNFDGEIRGDLIKFYNTMYVPQVKEFANKFGSARGSVMNLSLSP
LPKGKAPANSPVRRVTGSIMTRTLDPKAISASPAPQLSYCFSRSPAKDLEAINKMMICVD
AKKKSVGKRLLSDDTDVEMTESTSPPKKTTTFVARKLENIIGERRTQNQ
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggggcagtcggatgatattgaggattcgatgtacggccggcaccaagatctttgccaa
aagctgaatatggacgcggccgccgcgtccgaggcttggaaatcctacgagactattcgg
cagaattatactctcgagggtgatcagttgcattggatagggtgtgcagtatatgtcgct
tgtagaaaattctctatacccactgtaggaagaccaggtactaatgtggaaggcaattgt
gtgtcattgactaggctcctgcaactgtgtaatcttccattgatacaattctttacaaag
agtaaatcatgggcagatatggcaaatatgcctcaggatttccgagccaggatagaaaag
ctagaggctaatttctcggtatctatggttatctttaaaaaatatcagccaatatttgcg
gatatctttaaagatccacgagaagatacctcgaaaccacatagatccagaaggcataaa
gcagtgccctgtacacccaccagggtctttgaattttgctggacgctgtttatatgcata
aaaggtgcaattcatgatatctcggacgatcttgttaactcttatcatctcttactagtc
tgctgcgatcttatatatagtaatgctctgttatctaacagaaaagatttgttgaatcct
aattttcccggcttaccaacaaattttgacgatgataattatactccgccacaagcagca
aattgcattgttaacttgttgtgtgagcgtcatgatgcaatagctgttgaagctaaagct
ataaaagaatactgcatgaaaaattacattaacaaactatttaatgagaaaatcttacgt
ggtgatcagtcaaatttctctggtatgctagagtcattgaattttgatggtaacaacaag
gccattaacaagtcttatgaacagcgtatgctaagtgttggagactttgatgaaagaatt
ttcttaggccacaacgctaatgaaaatattggttcccctacacaaatgatgaacattgat
gattttcatgaaagattgcaaatgcaaagagaacagcatgctgggcagatacaatatctg
gcacctcctaccccattaactggacgtaaatatcttcgatcgaaggatatgtctaatata
acaccagtgactacagccactcaaagcgtcattaaattacaagctttgatagctggacaa
tctgctcccagtgaaagtctattacaaatattgaacaattgttctcaagatgttaagtcc
tcactcgaggcaaaagttaaacaaattggtgagcaattttgcgcaaactataataataat
gcaaatatcaccaatgtaaatgatggttcaacatccgactttggaaaaaagcgtcttctc
atgggacaaactctgttttacaagcttttagaaatgattctaaatgacgagaaacgtaaa
aagccgaatgacgatataactaatctccttttgaatgcagtttttatccaatgcctgttt
gcttgctgtctggaaatagttatatattcatataaaagtaacgacaaggtattcccttgg
atactgaaggctctgaatctggatgcttactatttctataaggttatagaaattatagta
agagctgaggatcagttgtcacgggatgttgttaagcacttgaatcatatcgaggagaag
attttagagtctctggcgtggcaaagtgacagtcctttgtggcaaactatcgagtctttg
ctggatggtgtgccaagctgcgaagaagtttctttgcctggtacattggaaactgctgat
ccaaatgcgcctggacaacctgtgttaagacgaattgctttagatcgagaacgtactcaa
catgatgttcaacaaagtccgatttcatccgcttcggaaagatttcagtctcctgtccca
gcatctggtgtagcaaagaagcgattattttccgaaactagggtcaccggtcaaagtgtc
cttcgtgtcggacagagtgtgttatctactaacagaatgttagtggacaatggtcatagg
atacttctgcttcctgaacaaattgtcgtttctaaaccatctagcacgcaagcgttaaat
aattccacacaagcgacgaacaaagacgcggctaaaccgaagagaacaggctctgtcgcg
ctgttctttcgaaagttctacaatcttgcgtgcgtacgcatgcaggatttgtgcaattca
ttggaaatatcggacaacgataagaaaaagatctggacgattttcgaatactccgtcaag
gaacgtaccaaattgatgaaggatcgacatcttgatcagatcttaatgtgtgcaatttat
gtaatatgtaaattggtcaggatagaaagaaactcattcactgaaatcatgcggtgttat
cgtctacagccacaggctgaatcgcatatatatagatcggtgcttatcgaaaaagtttct
aatgacggagattcgaagacgagtagtaacgaaagatcggaagacaatagtatgtcagta
acagaaaatgtaactccaccgacaccaacaaatatggccgggacgtcacaaaacttcgat
ggggagatacgcggcgatctaatcaagttctataacacgatgtatgtcccgcaagtcaag
gaatttgcaaataaatttggatcggctcgcggtagcgtcatgaatctctcgctgagtcct
ttaccgaaaggaaaagcacctgctaattctccagtaagacgtgttactggtagtattatg
acacgcactctagatccgaaggctataagtgcgtcaccggcgccgcaattaagttattgc
ttcagtcgtagtcctgccaaggatttagaagctatcaataagatgatgatatgcgtagac
gcaaaaaagaagagtgtaggaaaacgattactttctgatgatacggatgtagaaatgaca
gaaagtacatctcctcctaaaaaaactacaacttttgttgcacggaaattagaaaatatc
attggagaacgacgaacgcaaaatcaataa
DBGET
integrated database retrieval system
