Atta colombica: 108691011
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Entry
108691011 CDS
T11098
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
acoc Atta colombica
Pathway
acoc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108691011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoc04131
]
108691011
Membrane trafficking [BR:
acoc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
108691011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
DUF3896
FerA
Motif
Other DBs
NCBI-GeneID:
108691011
NCBI-ProteinID:
XP_018054103
UniProt:
A0A195B1Z9
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MVSLFFSQPMTPAITGMEEQEKLLEDAIGVVKVQAFQMKHCLDKSKLMDALKHASTMLGE
LRTSLLSPKSYYELYMAITDELRHLELYLLDEFQKGRKVTDLYELVQYVGNIVPRLYLLI
TVGLVYIKTTPGLKRDLLRDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDVTEGDDEDG
TVRDSIDFVLMNFAEMNKLWVRMQHQGHSRDRERREREREELRILVGTNLVRLSQLESVI
LDKYKKLVLPGILEQVVSCRDAIAQEYLMECIIQVFPDEFHLQTLNAFLKSCAELQNGVN
VKNIIISLIDRLAAFSQRSDGVGGPGSPNQVPGIPQDVKLFDVFSDQIATIIQTRQDMPP
EDIVSLQVALINLAHKCYPDRVDYVDKVLFTTVQIFQKQNVDKLEYNSAVSRELVRLMKI
PVDNYKNILTVLKLEHYAPLLDYFDYEGRKSLAIYIITNILENETLIPMQEQVDAVLFMV
SSLVQDQSDQPNIEEDPEDFAEEQGLLGRLIHHFRSETPDQQYMILSAARKHFSAGGNKR
IKFTLPPIVFQSYQLAFTYKALKDQDDMWQKKCQKIFQFCHTTITALMKAELAELPLRLF
LQGAIAIGEIRFDNFEMVAYEFMSQAFSIYEDEISDSKAQLAAITLIIATFEQMSCFGEE
NAEPVRNQCALYASKLLRKPDQCRGVATCSHIFWSGKSLATGGKEMQEGGKVLDCLKKGI
RIASQCMDTSVQVQLYVELLNHYIYFYEKGNTAVTVQILNQVIAKIREELPNLEASEETD
QIQKHLANTLEHLRNRMESPDSDGLSYQGLVL
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggtatctttgtttttctcgcagccaatgacacctgctataacagggatggaggaacag
gagaaattgttagaagatgcaattggagtggtaaaagtccaagcttttcagatgaaacac
tgtctagacaaatccaaactaatggatgcgctaaaacatgcctctaccatgttgggagaa
cttaggacttcccttttaagtccaaaaagctattatgaattatatatggcaatcacagat
gaattacggcacttggaactttatttattggatgaatttcaaaaaggaagaaaagttaca
gatctctatgaattggtacaatatgttggcaatatcgtacctagactatatttacttatc
actgttggcctggtttatatcaagacaacgcctggtttgaaaagagatcttctgagagac
cttgtagaaatgtgtagaggcgtgcaacatccactgcgtggtctattcttaaggaattat
ttgttacaatgcacaaggaatattttgccagatgtcaccgagggtgatgatgaagatgga
actgttcgtgacagcatagatttcgttctgatgaattttgcagaaatgaataaattgtgg
gtacgtatgcaacatcaaggtcatagtagggacagagaaagaagagagagggaaagagaa
gagcttcggattctagttggaacaaatcttgtacgacttagtcaattggaatctgtaata
ttggataaatacaaaaagcttgtattgccaggaatcttagagcaagtcgttagttgtaga
gatgcaatagcacaggaatatcttatggagtgtataattcaagtctttcctgatgaattc
catttacaaacgttaaatgcatttctgaagtcgtgtgcagaattgcaaaatggagtaaat
gttaaaaacataattatatcattgattgatcgacttgcagcctttagtcaacgatctgat
ggtgtaggaggaccgggaagtccaaatcaagtgccaggaattccacaagacgtcaaactg
tttgacgtatttagtgatcaaattgcgactatcatacagacaagacaagatatgcctcct
gaagatattgtgtccctccaagtggctcttataaacttagcacataaatgctatcccgat
cgtgtggattacgtagataaagttttgtttacaacagttcaaatatttcagaaacaaaac
gtcgataaattggagtacaatagtgctgtttcaagagaactagttagattaatgaaaatt
cccgtagacaattataaaaatatattaacagtgcttaagcttgaacattatgcgcctctt
ttggattatttcgattatgagggcagaaaatcactagctatatatataataacgaatatt
ttggagaatgaaacattgattccaatgcaagagcaagtagatgcagtgctcttcatggta
tcttccttggtgcaagatcaatcagatcaacctaatatagaagaagatcctgaagatttt
gccgaagaacagggattgctcggaagattaatacatcattttagatcagaaacaccagat
cagcaatatatgatactgagtgctgcaaggaagcatttcagtgctggtggtaacaaaaga
ataaaattcaccctacctcccatagttttccaaagttatcaattagcatttacttacaaa
gcactgaaagatcaggatgacatgtggcaaaaaaagtgtcaaaaaatttttcagttctgc
cacacgactatcacagcattaatgaaggctgaattagccgaactacccttaagacttttt
ctacaaggcgcaatagcgattggtgaaatccgttttgataattttgaaatggttgcttat
gaattcatgagtcaagcattttcgatatatgaagacgaaataagtgattcaaaagctcag
ctcgcagctattaccttgatcattgctacatttgagcaaatgagttgttttggcgaagaa
aacgcagagcctgtacgcaatcagtgcgctttatatgctagcaaattattgagaaagcct
gatcagtgtagaggagtcgctacttgttcacatatattttggtctggaaaatctttggct
acgggcggaaaagagatgcaagaaggtggcaaagtgttggactgcttaaaaaaaggtatt
aggatagcaagtcagtgcatggatacatctgtgcaagtacaactgtacgtggagctgctg
aatcattacatttacttctacgaaaaaggaaatacagctgtaaccgtgcaaatattaaat
caagtgattgctaaaattagagaggaacttcccaatttggaagcgagcgaagaaaccgat
caaatacaaaaacatttagcaaatacgttagaacatttaagaaataggatggaatcgcca
gattccgatggactttcttatcaaggtcttgtcctttaa
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