Atta colombica: 108691234
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Entry
108691234 CDS
T11098
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoc03036
]
108691234
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
acoc00535
]
108691234
Chromosome and associated proteins [BR:
acoc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108691234
Meiosis-specific proteins
Cohesin complex and associated proteins
108691234
Proteoglycans [BR:
acoc00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
108691234
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
108691234
NCBI-ProteinID:
XP_018054398
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
MYIKQVIIQGFKSYREQTVVEPFDPRHNVVVGRNGSGKSNFFYAIQFVLSDEFSHLRPDQ
RQGLLHEGTGPRVISAHVEIIFDNSDGRLPIDKDEVYLRRVIGSKKDQYFLNKKIVTRND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSHRLKLLREVAGTRVYDDRREESKSILK
ETEGKLEKIEDFLRTIEERLQTLEEEKEELKEYQRWDKQRRCLEYTIHERELKENKRKLE
ELEESRANSGAEQARLGAEAKTAQEMVRAATKRLKEAKKEVQTAKEERDTLSAEQQQLLK
EKNKLTFTINDLLEEVKGDNDSKKRAQQELEKLKSNIAARETELKSLKPEYERMKRVEEE
CTRELQLKEQKRKELYAKQGRGSQFTTKDERDKWIQNELKQLTKQIKDKEEHQKKISEDL
KRDAEKQIALEKKIGDHTREMEQQRASIDDHNKQYYELTKSKDQCQATRKEHCSGRKDMA
NEVSSYYGPVIENFNCDKSVYMAVEVTAGNRLFHHIVETDKFGTKILKEMNNQRLPGEVT
FMPLNRLHVKDIDYPQTSDAIPMISKLNYDPKFDKALRYIFGKTLICRNLEAATTLARDS
GLDCVTLEGDQVSSKGSLTGGYFNTLRSRLEIQKTRSELMSQISTLETQLTTLKEEIRKA
DQNISSYVSEMQRTETKNSKAKDIYDKMKAEIRLMKEELSAIERYRTPKEKSLAQCTSSL
EAMRATKDGLESELHQELMAQLSVADQHQVDTLNDDIRRLTKENKEAFAKRMQLEAEKNK
LENLLTNNLVRRKDELVQALQEISVEDRQRQLDSSKIQLADIEKRLVKVNEDFKAQNEKV
TNAMKKQKSESAEVEKWKLKEKEAQEKIEADAKDLEKLASKLNILQQKIVECTQKITELG
ALPSHEAYSKFSTMSTKQLFKEMEKANNHLKKYSXLLKTILKYTIEXIEXINTSESKIYY
IMYTHGKKQKYIYIYSVYIVYLNFXSSEGLMFXKSVMIIYFKFHVTIFFSFFKVSKYFSE
VFKKLVPSGHAQLVMKTADGDEGDDGTAEPSDSDRFIGVGIKVSFTGHRGEMREMNQLSG
GQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVADMIHELSSDAQFITTTFRP
ELLHHANKFYGVKFRNKVSHVECVTREEAADFVEDDTTHG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgtacattaaacaggtaattatccaaggatttaagtcatatcgtgaacagacagttgtt
gagccttttgatccaagacacaatgtagtggttggcagaaacggttctggaaagagtaac
ttcttttacgcgattcaatttgtccttagtgatgaattctctcatctcagaccagatcag
agacagggactgttgcatgaaggaacaggacctcgtgttatatctgcccatgtagaaatc
atatttgataattctgatggaagattaccgatcgataaagatgaagtttatttaagaaga
gtaatcggctccaagaaagaccaatattttctcaacaaaaagattgtaacaaggaatgat
gtaatgaatttattagagtcggcaggattttctaggtctaatccgtattatattgtgaag
caaggaaagataaaccaaatggcaacagcaccagattcccacagattgaaattattaaga
gaggtagcaggtactagagtatatgatgatagaagagaagaatcaaaatctattttgaaa
gaaacagaaggaaaactagaaaaaatcgaggattttctgcgaacaatagaagagcgtttg
caaacacttgaagaagagaaggaagaactgaaagaatatcaacgttgggacaaacaacgt
cgttgtttagaatatacgatccatgaacgtgaacttaaagaaaataaaagaaaattagaa
gagctcgaggagtctagagcaaatagtggagccgaacaggcgagattaggtgccgaagct
aaaacagcgcaagaaatggtacgtgcagctacgaagaggctaaaggaagcaaaaaaggaa
gtgcaaactgccaaagaagaaagagatactcttagtgcagagcaacagcaattgctgaaa
gaaaaaaacaaattaactttcactattaacgacttgctagaagaagtaaaaggtgataat
gacagcaagaaacgagctcaacaagagttggaaaagttgaagtctaatatcgctgctcga
gaaaccgagttaaagtctcttaagccagagtatgaacgaatgaaacgtgttgaagaggag
tgtacacgagaattacagttaaaagagcagaaacgaaaagaattatatgctaaacaaggt
cgtggtagtcaatttactactaaggatgaaagagataagtggatacaaaatgagcttaag
cagcttacgaaacagataaaggataaagaagagcatcaaaaaaaaattagcgaagattta
aaacgtgatgcagagaaacaaattgctttggagaaaaaaataggagatcatacacgcgag
atggaacagcaacgtgcatcaatagacgatcataacaagcaatattatgagcttacgaaa
tcgaaagatcagtgtcaagcaactcgaaaagaacattgtagtggacgaaaagatatggct
aatgaagtgagcagctattatgggcctgtaattgaaaatttcaactgtgacaagagcgtc
tatatggcagttgaagtaaccgctgggaatagattgtttcatcacattgtggagaccgac
aagtttggcacaaaaattttaaaagaaatgaacaatcaacggttgccaggagaagtaact
tttatgccactgaatagacttcacgtaaaggatattgattatccacagacttctgatgct
atacccatgatatccaagttgaattatgatcccaaatttgataaagcgttaagatatata
tttggaaagactttgatctgtcgtaatttggaagcagcaacgactttggcgcgggattct
ggcttagattgcgttacattagaaggagaccaagtttcatccaaaggctctttaactggt
ggatatttcaatacactcagatcacggcttgagatacaaaaaactagatcggaattaatg
tcacaaatttctactcttgaaactcaattaacgacgcttaaagaagaaatcagaaaggcg
gatcaaaatattagttcttacgttagcgaaatgcagagaactgaaactaaaaatagtaaa
gctaaagatatatacgacaaaatgaaagcagaaatacgtcttatgaaggaagaattaagt
gctatagaaagatatcgaacaccaaaagaaaaaagtcttgcacaatgtacttcaagtttg
gaagctatgcgtgcgactaaagacggcctggagagtgaattacatcaagaacttatggca
cagttatccgttgcagatcagcatcaggtcgatactttaaatgacgatatcagacgttta
acaaaggagaacaaagaagcattcgcgaaacgaatgcaattagaagcagaaaaaaataaa
ttagagaacttattaacgaacaacttagtgagaaggaaggatgagctagttcaagcttta
caagagatatcggtcgaagatcggcagcgtcagcttgattcatcaaagatccagttagcg
gatattgaaaagagattagtgaaagtaaacgaggatttcaaagcacaaaatgaaaaagta
accaatgccatgaagaaacaaaaatcggagtctgcggaagttgagaaatggaaattaaaa
gaaaaagaagcgcaagagaagattgaagcggatgcgaaagacttggaaaaattagcaagc
aagttaaatatcttgcaacagaaaatagttgagtgtacacaaaaaattactgaacttggc
gcattgcctagtcacgaagcttattctaagtttagtacaatgtccacgaaacagcttttt
aaggaaatggaaaaggcaaataaccatttaaaaaaatatagttaattacttaaaactatt
ttgaaatatactatagaatgaatcgagtgaatcaatactagtgaatcgaaaatttattat
ataatgtatacacacggaaaaaaacagaaatatatatatatatatagtgtatatatagtg
tatctaaacttttaaagtagtgaaggattaatgttttaaaaatctgtcatgataatatat
tttaaatttcatgtgacaatatttttttctttttttaaggtgagcaagtattttagtgag
gtattcaaaaaacttgtaccttcaggccatgcacaattggttatgaagactgcggacggc
gatgaaggggatgatggaacagcggaaccatcagattctgatagatttataggcgtaggt
ataaaggtgtcattcacaggacatagaggcgaaatgcgagagatgaatcaattatctggt
ggacaaaaatcactcgtagcattggccctgatattcgcgatacaaaaatgcgatcctgca
ccgttttacttgttcgacgaaatcgatcaggcactagatgcacaacacagaaaagcagta
gcagatatgatccacgagcttagttctgacgctcagttcattaccacgacatttagaccg
gaattactgcatcatgcaaacaaattctatggagtgaagttcaggaataaggtttcgcat
gtcgaatgcgtgacgcgggaagaagcggctgatttcgtcgaggacgatacaacacacggt
taa
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