Atta colombica: 108691326
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Entry
108691326 CDS
T11098
Name
(RefSeq) zinc finger CCCH domain-containing protein 13-like
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108691326
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
108691326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
108691326
NCBI-ProteinID:
XP_018054504
UniProt:
A0A195B0P2
LinkDB
All DBs
Position
Unknown
AA seq
1392 aa
AA seq
DB search
MSKPNIRKITADPTKCNTDSSRRPSVFERLGTKPAIAAAAAAAQNTSDYCRNWALNGSCS
YGKSCKYANTHTLISPSKRAKKDNAIAGTSGLIAEDPFKRLTSKIVKKASHSPDLNIEEW
NQTDLEYEDEKVLERRRQLIQRELKLQMKKDKEVHGKDKVRQKKKAMSSSSSSHTSSTSS
SSSSSSSEDSSSTSTSDSHKKIKKIKTKRHHSISADYSEDKERKKKLKLKRLGTRNDKAV
NKKKRKLDNSTKKDLTTRPVKKYGSSSVTRKHISSLHARSPAIQQGSTSGVTSAVVATLG
SQVSVAHHASSSKIRERNRSDSPKTVKNNREVDKEDGRHYKKMRDMDECLSKDAVKCKSF
DKIKEQQEKEKNRAIDEKTKSDDRLRSKCKEKDVRSRTPPPPPPSSSERSSKYQHVKENA
SSKVQRSRTPSRRRDLTPAKNAEKQSNSSNRVRDAEKKDRDSHKRDKSKERDDARKNEQP
SSGKTKQIITSNQDDNYRRNNTNKDNFDDKTYSGDKSRQKSRERQREKEMRDERPSRLTR
DQRQEPQRDKDKDESQERCRNERQRERDRDRDRDRERERERDRERDRDRERERERDRERE
RDREIRERDRDREREKSMKPRERDVSTVISPAALNLSADKSSRYNSRIKERPLGKDVSFE
KSGGTRERNRSERERERSETKALAERERSSTQSRLDGRYERNTVVEKDVSSSRSKSTVNS
PRDRMDRFRETSLDRASLHDKSGHVAPSSSVQSTATLPPVPSTSSSSSVVAVTPALSSRE
HLIDMVDNHYDRDRHRRFGVRYERGHTSEHSSRKGQARIESSRIPSKINRIVDRRDANSP
RRTMEVDRNFGRNYGRLPEHWDEQEESAPHVEYRDHAHIHEDDRRKTIEGRRFDSPFEER
RVARDERSREARYVIQTTERSSFDDHRHHHHHHRHPLYPGDKLRSGGANIRDETVSNDNW
EGHHRDVEHGRDRSYQTVEWEEREWRSRPLWESRDSLPRSEIHDDEWNSRYDNTISDWKP
NDSRKWDNQNVHVRSHYRNERTKDLEHGESTQHNKRRSYNAPETREEPVIHPSAKQAAIY
GSMKEEPINKKLMELAEGRLCTTTREKSTDNFQKKNQQKDKPEIKEPVAVESKRSVADES
LQTLHTESDLSDISDDPDDILNMEEDTTDMETNKTRTNKKALDAAHRDVQSTVQEPAQSP
KEPAEETIFSSKSKDNIDTASLKNMEDDNMETMDFEEISDGELEEDIKTSGKGLGDALGV
DWESLVKETQARRIVPSNQDSAENRWQCKAIYYRIGISKKYAGEDFMKKLVKKYEKNDHK
EFLLNDIALMHTGLARNRLFQDLGNGAMHAVDDTLYRNNNTSYDEDVDYDWETLKPNTAL
YEEAKCLLQQVR
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaccaaacataaggaaaataacggctgaccctacgaaatgtaatacagactct
tcacgacggccgagtgtgtttgagaggttgggcaccaaaccagcgatcgccgccgccgcc
gccgccgctcaaaatacatcggattattgcagaaattgggccctcaatggtagttgttcc
tacggaaagagttgcaaatacgcaaacacacacacattgataagcccatccaagcgtgct
aagaaagataatgcgatcgcaggtacatctgggctcattgcagaggatcccttcaaacgg
ctcacatcgaagatcgtgaaaaaggcgtcgcatagtccagatttaaacatagaagagtgg
aatcagacagatctcgaatacgaggacgagaaagtattggagagacggcggcaattgata
caacgggaattgaaattacaaatgaagaaggacaaagaagtacatggcaaggataaagta
aggcagaagaaaaaagcgatgagctcctcctctagttcgcatacatccagcacgtctagc
agtagcagcagctctagtagtgaagactcctcttctacatccacatcggactcgcataag
aaaatcaaaaagatcaagactaagagacatcatagtatttctgccgattatagtgaggac
aaagaaagaaagaaaaaattgaaactcaagagactaggaacaagaaatgacaaagccgtc
aataagaagaaacgcaaacttgacaattccacaaaaaaagatcttactacgagaccagtc
aagaagtatggttcgtcgtctgtaaccaggaagcatatcagctcattgcacgctagatca
cctgcgatacagcagggatctacgagtggagtcacatctgcagtagttgcaacgttgggc
tcgcaagtttctgtggcacatcacgcatcatccagcaaaattcgggaaagaaacaggagc
gattcgccgaaaacggtaaagaataatcgagaagtggacaaggaggatggcaggcattac
aagaagatgcgtgatatggatgagtgtctgtccaaggacgctgtcaaatgcaaatcattc
gataaaatcaaagaacaacaggagaaagaaaagaaccgagctattgatgaaaaaactaaa
tcagacgatcggttgaggtccaagtgcaaggagaaggatgtgcgttcacgtacaccgccg
ccgccgccgccgtcgtcatcagaacgatcatctaagtaccagcacgttaaagagaatgcg
tcatcaaaagtacaacgtagtcgaacgccatcgaggagacgcgatcttaccccagcgaag
aatgcggaaaagcaaagcaactcgtcgaatcgcgtgagagatgcagagaagaaagatcgc
gattcgcacaaaagagataaaagcaaagaacgagatgatgcgagaaaaaacgagcagccg
tcttccggtaaaacaaaacaaataataacttcgaatcaagacgacaactatcgaagaaac
aacacaaataaggacaactttgatgataagacctacagcggtgataagtcgcgacagaaa
agccgtgagcgtcagcgtgaaaaggagatgagagacgaacgcccttcgagactgactcgt
gatcagcgccaagaacctcagcgcgataaggataaggatgaatctcaggaacgttgtcgg
aatgaaagacagcgcgagcgtgatcgcgatcgggatagggatcgagaaagagaacgagaa
cgtgacagagagagagatagagatcgtgaacgagaacgagaacgtgatcgtgagcgagaa
agagatcgtgaaatacgagaacgagatcgggaccgagaaagagagaagtctatgaaacca
cgcgaaagagatgtgtctacggtaatttcacccgcggcattgaacctatcggcggataag
agttcacgttacaatagtagaatcaaggaacgacctttaggtaaggatgtgtcatttgag
aagagcggcgggactcgtgagcgaaacagaagcgaacgcgaacgggaacgatctgaaacg
aaagctctcgccgagcgtgaacggagctccactcagtcacgactggatggaagatacgaa
agaaataccgttgtcgaaaaggatgtatcatcaagtcgcagcaagtcgacagtcaattca
ccccgggatcgtatggatcgttttcgagaaacgtctttagatcgtgcatccttacatgac
aaaagtgggcatgtcgcgccgtcatcgagcgttcaatcaacagcgacattaccacccgta
ccttcgacttcatcttcctcatcagtagtggctgtgacacctgctctatcatctcgcgag
catcttatagacatggtggacaatcactacgacagggacaggcacagaaggtttggcgtg
agatatgaacggggtcacacgtcagagcacagcagcaggaagggtcaggcacgaatagaa
tcgagtcgcattccgagtaaaattaaccgaatagtggatcgtcgagatgcaaacagtccg
cgacgcaccatggaagtggacaggaattttggtaggaactacggcagattgccggagcac
tgggacgagcaggaagaatcagctccacacgttgaatatcgggatcatgctcacatccat
gaggatgacaggagaaagactatcgaaggtagaaggtttgacagtccttttgaagagaga
cgcgttgctcgtgacgagagatccagagaggcaagatatgtgatccaaactacagagcga
tcatccttcgatgatcatcgtcatcatcatcatcatcatcgacatcctctgtatcctggc
gataagttgagaagtggtggagccaatatcagagatgaaactgtttctaatgataattgg
gagggacatcaccgtgatgtagaacatggtcgagatcgtagttatcagacagtagaatgg
gaagaaagggaatggcgtagtagaccattatgggaaagcagagatagtcttcctcgttca
gaaatacatgacgacgagtggaattccagatatgataatactataagcgactggaagcct
aatgattcacgaaaatgggataatcagaacgttcacgtgcgatcacattacagaaacgag
cgtacgaaggacttggagcacggagaatctacgcaacataacaaaagacgatcgtataat
gcgccagaaacaagagaagagccagtgattcatccttctgctaagcaagctgctatttat
ggcagcatgaaagaagaacctatcaacaagaagttgatggaacttgctgaaggtagatta
tgcacaactactagagaaaagtccacggataacttccaaaagaagaatcagcaaaaggat
aaacctgaaattaaggaacctgtcgcagtggaatcaaagcggtccgttgccgatgagtct
ttacagactcttcatactgagagtgatttgagtgatattagcgatgatcctgatgatata
ttgaacatggaagaagatactacagatatggaaactaataaaacacggacaaataagaaa
gcattagatgctgctcaccgtgatgtacagtcaacagtacaagagccagctcaatctccg
aaagaacctgcagaagaaactattttcagttcaaaatctaaggataatatcgatacagcg
tcattgaagaatatggaagacgataatatggaaactatggactttgaagaaatttctgat
ggtgaattggaggaggacatcaaaacgagcggaaaaggattaggtgatgccttaggagtt
gattgggaatctcttgtgaaggaaacgcaagcgaggagaattgttccgtccaatcaagac
tctgcggagaatcgatggcagtgtaaagctatttactatagaatcggtatatctaagaaa
tatgcgggcgaagatttcatgaaaaagttggtaaaaaagtatgagaagaatgatcataaa
gaatttttgctgaatgatattgcgctaatgcatacaggacttgcacgaaatcggttattt
caagatttaggtaatggtgcaatgcatgctgtagatgatactttgtatagaaataataat
acaagttacgatgaagatgtggactatgattgggaaacattgaagccaaatactgctttg
tacgaagaagcgaaatgtttattacagcaagtgcgatga
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