Atta colombica: 108691340
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Entry
108691340 CDS
T11098
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108691340
03041 Spliceosome [BR:
acoc03041
]
108691340
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108691340
Spliceosome [BR:
acoc03041
]
Complex C
Other components
EJC/TREX
108691340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4078
DUF4325
Motif
Other DBs
NCBI-GeneID:
108691340
NCBI-ProteinID:
XP_018054526
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MNMTKKINVNYSSLVGLKAELLRKQAEVNEVKLKTESINTQPLSNKKKNKKIVADNMEKN
AKKSMDPEDIIAHKKSKLMLEAKARLYERLKKSKNNNDKFLVDFENKLDESNEEFVDETI
DKEHPIESEENWVEYQDCFGRTRKCLREDLPHMQKKDELIKHEIMKKHIDEDKEEEAKEQ
YPVQEKEPEIEIMRRKWEEQTQKLVDKVDIHYQDILFDEARTHGVGYYAFSQDEEKRTKQ
QENLANLRKETERKQREMKERKELKEKLEQNRLKAARIRQRIRAGLPAEPTEEELAQENK
LINSNNDINTNKVESAEKENSKEKVNDASTSINESTQEEKTNDEDKIKAFGELLRKKNHW
HIMSQEEWVDKCRAQRISEFGPVYDNFKSTGFYNSSQSIDEHLTHKENKELDNTETCDSQ
ESIEESNDNLQNYEGSNESVDNETVSIVKDIDNNSQNNKNDLPEYNATDNSPESFENTIG
ATLTPTMALPNLSQRQATVSYPLSYLSSNYSQNVCGYSEIYMSEQQTTMDIPLPGENNIL
PSASNSVTHTNKQESLSRSINEDNIMAGLKYLRKKFEASHSKWA
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgacaaagaagataaacgtcaattattcatccctagtgggtctaaaggcagaa
ctgttaagaaaacaagctgaagtaaatgaggttaagttgaaaaccgagtctattaataca
caaccactgtcgaataagaaaaagaacaagaagattgttgcagataatatggaaaaaaat
gctaagaaatctatggatccggaggatatcatcgctcacaaaaagtcaaaattaatgctg
gaagccaaagcgagattatacgaaagattgaagaaatccaaaaataataatgataaattt
cttgttgattttgagaataaattagatgaatccaatgaagaatttgtggatgaaacgatt
gataaagaacatcccatagagtcagaggaaaattgggtagagtatcaggattgttttggt
cgtacaaggaaatgtttgcgggaggatttgccacacatgcaaaagaaagatgaattgata
aagcatgaaataatgaagaaacatattgatgaagacaaagaagaagaggctaaagaacaa
tatcctgttcaagagaaagaacctgagatagaaatcatgagaagaaaatgggaggagcaa
acgcaaaagcttgtggataaggtggacatacattatcaagatatattatttgatgaagca
cgaacacatggtgttggttactatgcattttcgcaagatgaagagaagagaacaaagcag
caagaaaacctggcaaacttaagaaaggaaacagagagaaagcagagggaaatgaaagaa
aggaaggaattgaaggagaaattggaacagaatagactaaaggcggcaagaattagacaa
cgtatcagagcaggcttaccagcagaacctacagaagaggaattggctcaagaaaataag
ttaattaattcaaataacgatattaacactaacaaagttgagtctgctgagaaagaaaat
tctaaggagaaagttaatgatgcatctacaagtatcaatgaatctacccaagaagagaag
actaatgatgaagataagataaaagcttttggagaacttttaagaaagaagaatcactgg
catataatgtcacaagaagaatgggtggataaatgtagagcgcaaagaattagtgaattt
gggccagtttatgataactttaaaagtactggattttacaacagttctcaaagcatcgat
gaacatttaacccataaagaaaataaagaactggataacacagagacttgtgattcccag
gaatccattgaagaatctaatgacaatttacagaattatgaaggtagtaatgagtctgtc
gataatgaaacagtctcaattgtgaaagatattgataacaatagccagaataataaaaac
gatttaccagaatataatgcaactgataactctcctgaatcatttgaaaatacaatagga
gcgacattaactcctaccatggctttacctaacttatctcagagacaagcaacagtttca
tatccgttatcttatctatccagcaattattcacaaaatgtatgtgggtactctgagata
tacatgtctgaacaacaaacaactatggatatccctcttcctggtgaaaataacatttta
ccttcagcttccaacagtgtgactcatacgaacaaacaagaatcattatcacgaagtata
aacgaagataatattatggcaggtctcaaatatttaagaaaaaaattcgaagcaagtcat
agtaaatgggcataa
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