Atta colombica: 108691475
Help
Entry
108691475 CDS
T11098
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acoc03041
]
108691475
Enzymes [BR:
acoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108691475
Spliceosome [BR:
acoc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108691475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
108691475
NCBI-ProteinID:
XP_018054720
UniProt:
A0A195B0M1
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MLRRKQQRHRPIGEDTRIAVNLTIKKLLSSPDQKELEFPSSYTAEERAYIHELARELGLK
SKSRGKGTNRFLTVYKREGSTIVQADAVIKLQKHSKQGIYNLMQTFPLNHKECQDLLPPI
ERERPLNNDVNTNTKAMGRLNNSIPQVPQLKTNFDVLQFRKSLPIFNAREEILSALNNHQ
VIIIAGETGCGKTTQVPQYILEHYQQKHQPCRIICTQPRRLSAVSVAERVAFERDEKIGQ
TFGYQIRLESRVAPKTLLTYCTNGVLLRTLMGGDSALTTLTHIIVDEVHERDRFCDFLLI
ALKDALVKYRSLKLILMSATMDTSIFAKYFNKCVVINVPGRSYDVDVYFLEDILKMTGYM
TKEMLVKKKEFLKWKDKQKTLESWKQYKPQHSNKSTKSEKSLLPAPILAQQSDPIPEKIK
LEPWLIEEMDKSIFDAWVNGREDNFAQLLHFILSENVSVDYQHSETFITPLMAAAARGCI
NTTEQLLNLGANLNLRSANDWTALDWAKSRNHTECAELIEAYMKTYDCAVPNNELAQVTE
TSLSEEDKLLLDIYHHTFNDDNIDYDLLLELVFYIHLKMPTGSILIFLPGYDDIVTMKEK
INSEDKKMNQGLRYNLFVLHSNMQTCDQKKVFKPSPQGTRKIILSTNISETSITIDDVVY
VIDSGKVKEKSFDAISSVCTLTSNWISQACAKQRKGRAGRCRRGICYRLFSSIRYSNMQA
YQTPEILRLPLQELCLYTKHLTSGNTPIAEFLDKALEPPSNVVTRNAVQLLKTIDALDPW
EDLTELGSHLLDLPIEPRLGKMLLYAVVLKCLDPILTIVCSLAYKDPFILPSQPSQKRAL
TAARKKFATATYSDHMVVLRAFQGWQNARATGKERAFCEKNFISAPVMEMVVGMRTQLLG
QLRASGFVRARSPGDIRDLNSNSENWAVVKAALTAGLYPNLIRVDREHMQLRTQKEVKVF
FHPSSTLRDYPKSSRMTSAQTHCTNVQSLPCDWLLYEEMSRTGRFCHVKIVTAVNPLTVA
LFSGPARLPMDVIYEAEAVPESESDSEVDEFHEGTIFKLDDWVVFKLDPEAAQLFLHLRQ
KWNALFLRRMKAPNKAMSALDEKVINTLVTVITNEEQACGLQQPAGIGQRPRPLIVDYYP
ANVRRDDYSERYF
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgaaggaaacagcaaaggcatcgccccatcggggaagatactcgaatcgcagtg
aacttgactataaaaaaattgttgagcagcccggatcagaaggagctggagtttccatcg
tcgtatacagcagaggagcgggcgtacatccatgaattggctagagagctgggcttgaag
tcaaaaagtcgagggaaaggtacaaatcgcttcttgacagtatacaagagagaaggttca
acaatagttcaagctgatgctgtgataaaattgcaaaaacattcgaagcagggtatatat
aatttaatgcagacttttccattaaatcacaaagaatgccaagacttgcttcctccaatt
gaaagagaacgtcctcttaataatgatgtaaatacaaatactaaggctatgggaaggtta
aacaacagcataccacaagttcctcaattaaaaactaattttgatgtgctgcagttccgc
aaatctctgccaatttttaacgcgagggaagaaattcttagtgcattaaacaatcatcaa
gtgatcataatagcaggtgaaaccggatgtggtaaaaccacacaggtgccacaatatatc
ttggaacactatcaacagaagcatcaaccttgtagaattatttgcacacagcccaggcgc
ttgtcggcagtatccgtggccgagagagtagcgtttgaaagagatgaaaaaatcggccag
acttttggatatcaaataagattggaaagtagagttgctcctaaaactcttctaacatac
tgcacgaatggagtattgcttaggactttaatgggcggcgattccgccttaactacgctc
acgcacatcattgttgacgaggttcacgaacgtgacagattctgtgacttccttttgata
gctttgaaggatgcattagttaaatatcgttccttgaagctgatacttatgagtgccacg
atggatacttctatctttgccaagtatttcaataagtgcgtagttattaacgttcctggt
cgatcatacgacgtggatgtatactttttggaagatattttgaaaatgactggttacatg
acgaaggaaatgcttgtaaagaagaaggagtttttaaagtggaaagataaacagaagact
ttggaatcttggaaacaatacaaacctcagcattcaaataaaagtaccaaaagcgagaag
agtttattgcctgctccaattttagcccagcagagcgatcctataccggagaaaattaag
ctagaaccctggctgatagaagaaatggacaaaagtattttcgatgcatgggtaaatggt
agagaggataattttgcgcagcttttacattttatattatcggaaaacgtttctgtagat
tatcagcattcagagacttttataacaccgttgatggctgccgcagctagaggttgcata
aacacaactgagcaacttctaaatctaggtgcgaatctcaatttgaggtctgctaatgat
tggaccgcgttagactgggcaaagagtaggaatcataccgaatgcgctgaattaatcgaa
gcttatatgaaaacttatgattgtgcggtaccaaataacgaactagcgcaggtcacggag
acgtcactctctgaagaagataaattattacttgatatatatcatcatacattcaatgat
gataatatcgattatgatctattgttagaattggtcttttacatccatttaaaaatgcct
accggctctattttgatatttttaccgggatacgacgacatagttacaatgaaagaaaag
ataaattcggaagacaagaagatgaatcaaggtttacgctacaatttatttgttcttcac
tcaaatatgcagacttgcgatcagaagaaggtgtttaaacctagtcctcagggcacgcga
aagattatcctttccacgaatatatcagagactagtattacgattgacgatgtcgtgtac
gtcattgattctggaaaagttaaagaaaagtctttcgatgccatatcaagtgtttgtaca
ttgacttcaaactggatatctcaagcttgtgcaaagcaacggaaaggtcgagcaggtaga
tgcaggagaggaatctgctatcgtttgttctcttcgatccgatacagtaatatgcaggct
tatcaaacacctgaaattctacgattaccgctgcaagaactctgtttatacacgaaacat
ttaacatcgggaaatacacctatagctgaatttctggataaagctttggagccgccatct
aacgtagtgaccaggaatgcagtacaattattaaagacaattgatgcattagatccgtgg
gaagatttaactgaattaggcagtcatttattagatttgccaattgaaccaagactcggg
aagatgctgttatatgctgttgtcctcaaatgtttggatcccattttaacgattgtttgt
agtttagcatacaaagatccttttatattaccatcacaaccgtcgcaaaagagagctttg
accgcggcacgaaaaaaatttgccaccgcaacgtattcggatcatatggtagtccttcga
gcgttccaaggctggcagaacgccagagcaaccggcaaggaacgtgctttttgcgagaaa
aatttcatctccgctcccgtaatggagatggtagttggaatgcgtactcaacttctcggt
cagttgcgcgcgtctggctttgtcagagccagaagtcccggggatattcgagacttaaat
tcaaattcggaaaattgggctgtcgtgaaagcggctctgaccgcgggcttgtatcccaac
ttaattcgagttgatcgggagcacatgcagctacggacacagaaagaggtcaaagtattc
tttcatccctcgtcaacgttaagagattatccaaagtcttcgagaatgacgtccgcgcaa
acgcattgcaccaatgtgcaatccttaccgtgcgactggctgctttatgaggaaatgagt
cgtacaggacgtttctgtcatgtgaaaatcgttacagccgtaaatccattaactgtagca
ttatttagtggaccagctagattaccaatggatgtaatctacgaagctgaagctgtaccg
gaaagcgaatcggattcagaggttgatgaatttcatgaaggaactatttttaaacttgat
gattgggtggtgtttaaacttgatcctgaagcagctcaactgtttttacatttgcgacag
aagtggaacgccttgttcctcagacgtatgaaagcaccaaacaaggcaatgtcggcattg
gatgaaaaagttattaacactttggtaactgtaatcacgaatgaggaacaagcgtgtggc
ctccagcagcccgctggcatcggccaacgtccgcgtccgttaattgtcgattattaccct
gcaaatgttagaagagatgattattcggaaagatatttctaa
DBGET
integrated database retrieval system
