Atta colombica: 108691490
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Entry
108691490 CDS
T11098
Name
(RefSeq) putative ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
acoc Atta colombica
Pathway
acoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108691490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108691490
03036 Chromosome and associated proteins [BR:
acoc03036
]
108691490
Enzymes [BR:
acoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108691490
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108691490
mRNA degradation factors
5'-3' decay
Decapping complex
108691490
Chromosome and associated proteins [BR:
acoc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108691490
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA
Motif
Other DBs
NCBI-GeneID:
108691490
NCBI-ProteinID:
XP_018054740
UniProt:
A0A195B0L1
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MMTETHMNSNHMLNSGLSNKSEIDKMDDVGWKAKLKIPPKDKRIKTSDVTDTRGNEFEEF
CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDILARAKNGTGKTGAYSIPVLEQVDPR
KDVIQALVIVPTRELALQTSQICIELAKHMDIKVMVTTGGTNLRDDIMRIYQKVQVIIAT
PGRILDLMEKNVANMEHCKILVLDEADKLLSQDFKGMLDHVISRLPHERQILLYSATFPL
TVKQFMEKHLRDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQITQSIIFCN
STQRVELLAKKITDLGYCCYYIHAKMAQAHRNRVFHDFRAGLCRNLVSSDLFTRGIDVQA
VNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYEDRFNLHRIEQELGTEIKPIPK
VIDPSLYVARPEDNNSMEEGNVSK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgaaacgcatatgaactctaatcatatgttaaactctggtttgtctaacaaa
tcagaaatagataaaatggatgatgtaggttggaaagcgaaattaaagattccaccaaag
gataaaagaattaaaacaagtgatgttaccgacacacgtggtaacgagtttgaagaattt
tgcctaaaacgtgaattattgatgggaatttttgagaagggatgggagaagccatcaccg
atccaagaagctagtattcccattgcactttctggtaaggacatcttggcacgcgcgaaa
aatggaactggtaaaactggagcatattcaattccagtgctggaacaggttgacccaagg
aaagacgtaatccaagcactggtaattgtacctacaagagaattagcgctacaaacatca
cagatttgtattgagctcgcaaaacacatggatataaaagttatggttactactggagga
accaacttacgagacgacattatgaggatttatcaaaaagtacaagtgataatcgcaacg
ccaggaaggatccttgatctgatggaaaagaatgtagcaaatatggaacattgtaaaatt
ctagttttggacgaagcagacaaactgctgtcacaagactttaaaggaatgttggatcat
gtaatatcgagattaccacacgaacgtcagattctcctgtattcagcaacgtttccttta
actgtgaaacaatttatggaaaaacacttgagagatccatatgagattaatttaatggaa
gagttgactttaaaaggcgtaacacaatactacgcttttgtacaggaacgacaaaaagtt
cactgccttaacacgctattctccaagttgcaaataacgcaaagcataatcttctgtaat
tcaacacaacgtgtcgaattgttggctaagaaaataacagatcttggatattgctgttat
tatatacacgcgaaaatggcgcaggcacaccgaaatcgcgtattccatgatttccgtgca
ggattatgccgaaatctcgtgagcagtgatctatttactcgtggtattgatgttcaagct
gtgaacgtcgtaatcaactttgactttccgaagatggcagagacatatctgcatcgaatc
ggccgatctggaagatttggccacttaggtatagcaattaacctaatcacgtatgaagat
cgcttcaatctacaccgtatcgaacaagagcttggaacagaaattaaacctatcccaaag
gtgatagaccccagtttgtacgtggcgagaccagaagacaataatagtatggaagagggt
aatgtgtccaagtag
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integrated database retrieval system
