Atta colombica: 108691591
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Entry
108691591 CDS
T11098
Name
(RefSeq) syntaxin-5
KO
K08490
syntaxin 5
Organism
acoc Atta colombica
Pathway
acoc04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108691591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoc04131
]
108691591
Membrane trafficking [BR:
acoc04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
108691591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
DUF16
Syntaxin-5_N
TRPM_tetra
DUF2207_C
Nup54_C
Mucin
Motif
Other DBs
NCBI-GeneID:
108691591
NCBI-ProteinID:
XP_018054906
UniProt:
A0A195B0B0
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MSARRRHVVGPVVNRDLASSGGSRHYYDGDEASSRLLSEETVDLDPSEQQPTTTTTTTTT
TTTTTTTTTMTSRDRTNEFANAIRSMQSRTVARTAVNLQNPRRARQIQSYSNFMMIAKNI
SRNIAGTYIKLEKLALLAKKKSIFNDRQMEIEELTNIIKTDLKSLNLQIGKLQELGKSQR
ESFGSSQSHHIASHSSSIVMTLQSKLANMSNHFKSVLEVRSENMREEQSRRQQFTQGSLS
TMLPPSVVSGKQGSLLLQEEISSNSVAIDLEPVMNQQLQQTIIQDDTDAYVQSRAETMQN
IESTIVELGGIFQQLAHMVKEQEEMVERIDSNIEDTELNVEAAHTEILKYFQSVTSNRWL
MIKIFAVLIFFFIFFVVFLA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcacgcagacgtcatgttgtagggcccgtggtgaatcgcgaccttgcgagctcg
ggcggctcgcggcactattacgatggagacgaagcaagcagcagattattgagcgaggag
actgtcgacttggacccaagtgagcaacagccgacgacgacgacgacgacgacgacgacg
acgacgacgacgacgacgacgacgacgatgacatcccgcgacaggaccaatgagttcgct
aacgcgattcgctctatgcagagcaggaccgtggcgcggaccgcagtgaatctgcaaaat
ccgcgtcgcgcacgccagatacagagctactcgaactttatgatgatagctaagaacatt
agcaggaacattgctggcacatatatcaaactggagaaacttgctttgttggctaagaaa
aaatccatatttaatgacagacaaatggagatcgaagagcttacaaatattataaaaacg
gatctaaaaagcttaaatcttcaaatcggaaaactacaagagcttggaaagtcacagaga
gaaagctttggttcttctcagagtcatcacattgcttctcattcttcctcaattgtgatg
acattgcaatcaaagctagctaatatgtctaatcatttcaaaagtgtcttggaagttcgt
tctgagaatatgagagaggaacaaagcaggagacagcagttcactcaaggatctctgtcc
actatgctccctccgagtgttgtttctgggaaacaaggttccttgttactacaagaagaa
atttcaagtaattcagttgcgatagatcttgaacctgtgatgaatcagcagttacaacaa
acaattatacaagatgatactgatgcgtacgtgcaatcgagagccgaaactatgcaaaat
atagaatctactatagttgagttagggggtattttccaacaattggcgcatatggttaaa
gaacaagaagaaatggttgaaaggatagatagtaatatagaagataccgaactaaatgtg
gaagctgcacacaccgaaatactgaaatactttcagtctgtgacaagtaatagatggcta
atgataaagatatttgcagtcttgatatttttctttatattttttgtagtattcttagca
taa
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