Atta colombica: 108692058
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Entry
108692058 CDS
T11098
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoc04131
]
108692058
04121 Ubiquitin system [BR:
acoc04121
]
108692058
Enzymes [BR:
acoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108692058
Membrane trafficking [BR:
acoc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108692058
Ubiquitin system [BR:
acoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108692058
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
Zn_ribbon_19
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
C1_2
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
108692058
NCBI-ProteinID:
XP_018055652
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MAEAVVDGSPMSRFFCHKCSVKIERLLPNYTCPRCASGFIEELEISSNEGSSGMDMNSEE
LSDGDIDILTLNRSDRDRDIIEMIMGLSNTYTNQQLNTSQQPGGGNRNYVLGSRRRSNWS
RNPQDGRRTSSNRRRQESLQMPIENFIQDFIFNLSGAASLSNSVGQDAQPSVFNVRLFLG
NPGDYVWGRDGLDAIVTQLLNQMDGTGPPPLSRNQIDEIPTTTITQSQVDCKLQCSVCWE
DFKLSEPVRQLPCQHVYHAPCIVPWLELHGTCPICRQNLGDQNQAEANQDAAANIAGSTL
AGSSFAALFRAANEAHRTGQPISRTSSTSSSTSSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggccgttgtggatggaagtccgatgtctcggtttttttgccacaaatgcagc
gtcaaaatcgagcgtctgctgccgaattatacgtgtccacgatgcgcgagcggtttcatt
gaagagctggagatcagcagcaatgagggcagctcgggcatggatatgaacagcgaagaa
ctgagcgatggggatatcgacatcttgaccttgaaccgctccgaccgtgaccgtgatata
atagagatgataatgggtctctcgaatacatataccaatcaacaattgaacaccagtcaa
cagccgggtggaggcaataggaactatgtgctcggaagcagaaggagatccaattggtct
cgtaaccctcaagatggacgtcgtactagcagcaatcgtagaagacaagagagcctacag
atgcctatagagaatttcatacaagattttatcttcaatctttcgggagcagcgagtcta
agcaactctgtgggtcaagatgcacagccatctgtattcaatgttagactgttcttggga
aatcctggagattatgtttggggtcgtgatggattagacgctattgttacccaattattg
aatcaaatggatggtactggaccaccaccattatcacgcaatcagatcgatgagatacct
actactactataacgcaaagtcaagttgactgtaagctacaatgttctgtttgttgggaa
gattttaagctgtccgaacctgttagacaattgccatgccagcacgtttatcacgcacca
tgcattgtaccctggctggaattacacggaacctgtcccatttgcagacagaacttggga
gatcaaaatcaggctgaagcaaaccaggatgctgcagctaacatagctggatctacttta
gccggatctagttttgctgctttgtttagggcagcaaatgaagcacaccgaacaggacag
ccaattagccggacatcatctacttcgtcatctacttcatcagagtag
DBGET
integrated database retrieval system
