Atta colombica: 108692091
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Entry
108692091 CDS
T11098
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
acoc Atta colombica
Pathway
acoc04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108692091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoc04131
]
108692091
Membrane trafficking [BR:
acoc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
108692091
Protein recycling
Other Rab GTPase associated proteins
108692091
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
PRANC
DExH14_plug
Motif
Other DBs
NCBI-GeneID:
108692091
NCBI-ProteinID:
XP_018055702
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MYSTKTPTLRIDEADLKCRNGCGFYGNAEWEGYCSKCHREHLQKRRAQAERVSHAQSSDI
DNVTRSTNAGSYKGYEEKKVQQEKKYKLLNISFRKPVAKVQGYQELYHELLKDNPDLEKV
KAENRDLLLYIAKTPVEKDVRKCIHSFIVDILQNKDVKRIEELSEITQNFYHVFGKRLEN
STKYSDIPPDIKEKLLDYVERYAMTLLYRILFCPPFTTDEEKDLAIQKRIRQLNWVSGKN
LECRIHETSSEVRELVYTSITDLLNMDSAKAPQEKLACVIHCCRNIFLLLQQSVDGPASA
DEFLPALIFIVLKANPARLKSNINFITRFCNASRLMTGEGGYYFTNLCCAVSFIENLTAE
SLNMAEKDFNAYMSGECVPANTWESALMICESLHFMCEDITLLDDLQTKNTDIIKQAEEL
KNKMIDFKEKIREDVDKVIERTPLLISHSQRVPTNLDSEDIESYQLPPPIIPQIYPHSVD
NMNGGVMMDLSSDLMRTSLVEDSVTPSPTFDFPSFIGDDSLEVSKGEDETSLISLDTQSD
LASGDTQLFKKHMTDSLLDECPTPEANLPPVLKPISSEDYHGFTIQGSNIPTIPCSTGDS
SLTPAELNSGYYQNM
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtattcaacgaaaacgccgactttgcgaatcgacgaagctgatttgaagtgcagaaat
ggctgtggattctatggtaacgcggaatgggagggctactgcagcaaatgtcaccgagaa
cacttgcagaaacgacgggctcaagctgaacgtgtgtctcacgcacagagttcggatata
gacaatgtcactcgttcaacgaatgctggaagttacaagggatatgaggagaagaaagta
cagcaggagaagaagtataaattgttgaatatttcattcaggaaacctgttgctaaagtt
caaggatatcaggaattatatcatgaattattgaaggataatccagatcttgagaaagtt
aaggcggagaatcgagatttgctgttgtatatagctaagacaccagtggaaaaggatgta
agaaaatgcatacattcatttatagtagatatacttcagaacaaagatgtgaagaggata
gaagaattatctgaaataacgcaaaacttttatcatgtgtttggaaagcgtctggaaaac
agcaccaaatattcagatatacctccagatattaaagagaagttattagattatgtcgaa
aggtatgcaatgactttgttatacagaatccttttttgtcctccattcacgacagatgaa
gaaaaagacttagctatacagaaaagaatacgacaattaaattgggttagtggcaagaat
ttggaatgtaggattcacgagacaagctcggaagttagagaacttgtttatacatctatc
acagatcttttaaatatggattccgctaaagcgccccaagagaaactggcctgtgtaatt
cattgttgtagaaatatatttttgttgttgcaacagtctgttgatggacctgcatctgct
gatgaattccttccagcgcttatatttatcgttttaaaggctaatcctgcacgcctcaaa
agcaatataaattttattacaagattttgcaatgccagcagattaatgactggagaagga
ggctattacttcacaaatctgtgttgcgcagtgtcatttatcgaaaacttaaccgcggaa
tccttgaatatggctgagaaggactttaatgcatacatgtcaggagaatgtgttccagct
aacacatgggaatcggctcttatgatatgcgaaagtttacacttcatgtgcgaagatata
actttattagatgacttgcaaactaaaaatactgacattataaaacaagcagaagaacta
aaaaataaaatgatagatttcaaagagaagatcagagaagatgtagataaagtaattgag
agaacaccgctactaatatcgcatagtcagagggtacctactaatttagatagcgaggat
attgagagctatcagctacccccgccaattattccacagatatatccacattctgtcgat
aatatgaatggtggcgtaatgatggatttgtcgagtgatttaatgagaacgtcactagta
gaagattctgtaacgccatctccaacatttgactttccatccttcattggcgatgatagt
ctggaagttagcaaaggcgaggacgagactagtcttattagtttagatactcagtccgat
cttgcatctggcgatacccaactctttaagaaacatatgacagacagcttattagatgag
tgccctacacccgaagcaaatctaccacccgttttaaaaccaattagctcggaagattat
catggctttacgattcaaggatcaaatattccgacaatcccatgcagcacaggtgattca
tctttaactccggctgaattgaattccggttactatcagaacatgtag
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