Atta colombica: 108692318
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Entry
108692318 CDS
T11098
Name
(RefSeq) pinin isoform X1
KO
K13114
pinin
Organism
acoc Atta colombica
Pathway
acoc03013
Nucleocytoplasmic transport
acoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108692318
03015 mRNA surveillance pathway
108692318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108692318
03041 Spliceosome [BR:
acoc03041
]
108692318
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108692318
Spliceosome [BR:
acoc03041
]
Complex C
Other components
EJC/TREX
108692318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
RSB_motif
Motif
Other DBs
NCBI-GeneID:
108692318
NCBI-ProteinID:
XP_018056006
UniProt:
A0A151HZJ2
LinkDB
All DBs
Position
Unknown
AA seq
377 aa
AA seq
DB search
MRKLDCQELWGADRLEAQLEVARDGLRGLDRSIRKILGRDLPDGESGPLQSRIPQKRLLQ
EDRRRAITEFMNNELAGGKRRWQSSNAEPKTVFSRLSARVPSTADDSADEDDNITKPAVS
SRVIATPREIPSRQEVIRRERTDERSRQRNKRMFGALLGTLQKFRQEETKLKAKEDKKAE
VEARVEEARRREKEELRRERQQLFLSRKRQLAEVRTLEAKLARSRQFQDWRNAQLPLALF
IKTHAQPSIYYIPKRKHPQTDMLLAQSTKELHEEIEKREKALVEELNLIEIQIGLSKHSQ
NFEASSSLHTVEAPRLLEEGEENRDPNPEHNIEATINDNNDNADISIESVINENCDDHTE
KKEEVQLDQIQHDVNNG
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagttagattgtcaagagttatggggagccgacagattagaagcacagttagaa
gttgcccgcgatggacttcgtggtctcgatcgtagcattcgtaaaattttgggccgtgat
cttcctgatggcgaaagtggtccattgcagtctagaattcctcaaaaacgactattgcaa
gaagatcgtcgaagagctataacagagttcatgaataatgaattagcaggaggcaaacga
cgttggcaaagttctaatgcagaaccaaaaacagtttttagtcgattaagtgcacgtgtt
ccatctactgcagatgatagtgctgatgaagacgataatattaccaagcctgctgtatca
tccagagtaatagctactcctcgagaaattccttcacgtcaagaagttatcagacgagaa
agaacagatgagcgtagtcgacaaagaaataaacgaatgtttggtgcacttttaggtact
ttacaaaaatttagacaagaggaaactaaactcaaagcgaaggaagataaaaaagcagaa
gtggaagctagagtagaagaagctagaagacgagaaaaagaagaattgcgaagagaaaga
caacaattgtttttgtcacgaaaacggcaattggctgaagtgcgaacattggaagcaaaa
cttgcacgtagtcgacaatttcaagattggcgcaatgcacagttacctcttgctttattt
attaaaacacacgcacaaccttctatttattatataccaaaacgtaaacacccacaaaca
gacatgttattagcgcaatccacgaaagaacttcatgaggaaattgaaaaaagagaaaaa
gcattggttgaagaattaaatctaatagagattcagataggattaagcaagcattcacaa
aactttgaagcatcttcatctttacatactgtagaagctccacgtttactagaagagggt
gaagaaaatcgagatcctaatccagaacataatattgaggctacaatcaatgataataat
gataatgctgatatttcaatagagtctgtaataaacgaaaattgtgatgatcatacagag
aaaaaggaagaagtacaattggatcaaattcaacatgatgtaaacaatggctag
DBGET
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