KEGG   Atta colombica: 108692318
Entry
108692318         CDS       T11098                                 
Name
(RefSeq) pinin isoform X1
  KO
K13114  pinin
Organism
acoc  Atta colombica
Pathway
acoc03013  Nucleocytoplasmic transport
acoc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:acoc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108692318
   03015 mRNA surveillance pathway
    108692318
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acoc03019]
    108692318
   03041 Spliceosome [BR:acoc03041]
    108692318
Messenger RNA biogenesis [BR:acoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     108692318
Spliceosome [BR:acoc03041]
 Complex C
  Other components
   EJC/TREX
    108692318
SSDB
Motif
Pfam: Pinin_SDK_memA Pinin_SDK_N RSB_motif
Other DBs
NCBI-GeneID: 108692318
NCBI-ProteinID: XP_018056006
UniProt: A0A151HZJ2
LinkDB
Position
Unknown
AA seq 377 aa
MRKLDCQELWGADRLEAQLEVARDGLRGLDRSIRKILGRDLPDGESGPLQSRIPQKRLLQ
EDRRRAITEFMNNELAGGKRRWQSSNAEPKTVFSRLSARVPSTADDSADEDDNITKPAVS
SRVIATPREIPSRQEVIRRERTDERSRQRNKRMFGALLGTLQKFRQEETKLKAKEDKKAE
VEARVEEARRREKEELRRERQQLFLSRKRQLAEVRTLEAKLARSRQFQDWRNAQLPLALF
IKTHAQPSIYYIPKRKHPQTDMLLAQSTKELHEEIEKREKALVEELNLIEIQIGLSKHSQ
NFEASSSLHTVEAPRLLEEGEENRDPNPEHNIEATINDNNDNADISIESVINENCDDHTE
KKEEVQLDQIQHDVNNG
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgaggaagttagattgtcaagagttatggggagccgacagattagaagcacagttagaa
gttgcccgcgatggacttcgtggtctcgatcgtagcattcgtaaaattttgggccgtgat
cttcctgatggcgaaagtggtccattgcagtctagaattcctcaaaaacgactattgcaa
gaagatcgtcgaagagctataacagagttcatgaataatgaattagcaggaggcaaacga
cgttggcaaagttctaatgcagaaccaaaaacagtttttagtcgattaagtgcacgtgtt
ccatctactgcagatgatagtgctgatgaagacgataatattaccaagcctgctgtatca
tccagagtaatagctactcctcgagaaattccttcacgtcaagaagttatcagacgagaa
agaacagatgagcgtagtcgacaaagaaataaacgaatgtttggtgcacttttaggtact
ttacaaaaatttagacaagaggaaactaaactcaaagcgaaggaagataaaaaagcagaa
gtggaagctagagtagaagaagctagaagacgagaaaaagaagaattgcgaagagaaaga
caacaattgtttttgtcacgaaaacggcaattggctgaagtgcgaacattggaagcaaaa
cttgcacgtagtcgacaatttcaagattggcgcaatgcacagttacctcttgctttattt
attaaaacacacgcacaaccttctatttattatataccaaaacgtaaacacccacaaaca
gacatgttattagcgcaatccacgaaagaacttcatgaggaaattgaaaaaagagaaaaa
gcattggttgaagaattaaatctaatagagattcagataggattaagcaagcattcacaa
aactttgaagcatcttcatctttacatactgtagaagctccacgtttactagaagagggt
gaagaaaatcgagatcctaatccagaacataatattgaggctacaatcaatgataataat
gataatgctgatatttcaatagagtctgtaataaacgaaaattgtgatgatcatacagag
aaaaaggaagaagtacaattggatcaaattcaacatgatgtaaacaatggctag

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