Atta colombica: 108692354
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Entry
108692354 CDS
T11098
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
acoc Atta colombica
Pathway
acoc04140
Autophagy - animal
acoc04142
Lysosome biogenesis
acoc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
108692354
04140 Autophagy - animal
108692354
04148 Efferocytosis
108692354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoc04131
]
108692354
Membrane trafficking [BR:
acoc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108692354
Hops complex
108692354
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
VPS18_solenoid_2nd
zf-C3HC4_2
zf-rbx1
zf-RING_2
zf-C3H2C3
Beta-prop_pof12
zf-C3HC4
zf-RING-like
TPR_11
zf-RING_5
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
108692354
NCBI-ProteinID:
XP_018056060
LinkDB
All DBs
Position
Unknown
AA seq
1092 aa
AA seq
DB search
MAFLEWRRFNFFDLKKEVDAGKIATAFGDAQVAAATSGNGNLVFGDNIGNVHLINRLYEI
TTFRAYEITLILAQQVQHSTFLFTIGEDEPGCNPTIKVWNLAKLDKQGNPTCVRISRAIP
SYRAVPPTALCVHTSLTLMAIGFGDGSIMLYRGDLTRERKNKIKVLKDANLSITGLAIRA
TGKQTYLFVAMQNSVFLYNITIKDKEFKSTLDTMGCARKCSVLAESMQDSHFMIGRNDAI
YCYTPDGRGPCYAVEGQKIMLEWFRTYLVIVAKEAANVPRTTTTISAKPNTIEPIPPGVD
KHIITVLDIQNKFIVFSAPMVSVQAVLSEWGGFFILSGDNKLYHLDEKDLQSKLALLFKK
NLYDVSIRIAKNQQYDAEGLIDIFRQYGDHLYSKGDHNGAIEQYIKTIGKLEPSYVIRKF
LDSQHIDNLTTYLQALHKNGQATEDHTTLLLNCYTKLNHTDKLKEFIMTKDREVDFDVEI
AIKVCRQASPEDALLLAQKHGKHEWYLRIQIEDKQEYKKALEYMATLEFEEAEANMKKYG
NILIENVPNESTQFLKALCTNYKPSNKPLVDQEALNGYTEQRVDKASPEDFIHLFLNNSE
RLVEFLEHLVKSDTRWSTLIYNTLVEHYLHVWSALDNDVAKLQYEQKVVRLLQNSEARYD
KDQILILCHQHNFRKGLLFLYEESKLYQEILRFHLCEGDSEQVLATCKRFGHQDPNLWVQ
ALWSVAKNKDAPTKLLADILAYIAQERLLSPLMVIDAISTSLTCTLGDVRSYLCSVLRTE
NEQTQADTELTEKYRADTLKLREQIEAIKNNTIIFQGSRCSACHHQLELPSVHFMCQHSY
HQHCFQSFSENENECPACLPNNKKLLDIIRAQEQSRDLHETFHSLLDRAEDPFSLVADYF
GRGVFKKLTVITDTDKSLPTPTKLEEPKLNYGPGAEARLRLNEGKSSISGKIEPRRAGYD
VPTLITEERFRNFVKPDVYSSSLEANISGTGSGLSTPRGNSAKASPVPIREARILNSTTP
KSSPIDKSFVSKTPIVSSNPFETDDYDESKNPFANDDDDDDANNPFKDDDNDNDRVGNDD
DDYNKNLNPFGR
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttctggagtggagacgctttaatttcttcgatttgaagaaggaagttgacgcg
gggaagatcgcgacagcgtttggggacgcgcaagttgcggcagctaccagtggcaatggc
aatctggtattcggggataacataggcaatgtacatttaataaataggttgtacgaaatc
acaacctttcgagcttatgaaatcactctgatattggcacagcaagtccaacactccact
tttctgtttactattggtgaggacgagcctggatgcaatcctactataaaggtttggaac
ttggccaaacttgataaacaaggtaatccaacatgcgttcgaataagcagagccatacct
agttacagagcagttccaccaacagctttgtgtgtacatactagtcttacattaatggct
attggattcggggatggctctataatgttgtacagaggcgatctcactcgagaaagaaag
aacaaaataaaagtcttgaaagacgccaatctgtctattactggcctcgcgatacgagca
actggtaagcaaacgtatctgtttgttgctatgcaaaacagtgtgttcctgtataatatt
accattaaggataaggaatttaaatctactttggatactatgggttgcgcgcgaaaatgc
agcgtgcttgccgagtctatgcaagacagtcactttatgatcggacgtaatgacgctatt
tattgttacaccccagatggtagaggtccgtgttatgcagtggaaggtcaaaagataatg
ctagaatggttcaggacttatttggtgatagtggcgaaagaagctgcgaatgttccaaga
acgacaacaactatatctgccaaacccaacacgatagaaccgatacctcctggtgtcgat
aagcatattattactgtgcttgatattcaaaacaagtttatcgtattctctgcgccgatg
gtgtctgtccaagcagtcttgtccgagtggggtggattttttatacttagtggagataat
aaattgtatcatttagatgagaaagatttacaatctaaattagcgttgctttttaaaaag
aatttgtacgatgtttctataagaatagctaaaaatcagcaatatgatgcagaaggtctt
atagacattttccgtcaatacggagatcatttatattccaagggggatcataatggcgct
atagagcaatatataaagactataggcaaattggaaccgtcttacgtgataagaaaattt
ttggattctcaacatatcgataatttgacgacatatttgcaagcgctgcataaaaacgga
caagcaacagaagatcataccactttgttattaaattgttacactaaacttaatcatact
gataagttaaaagaatttattatgactaaagatcgtgaagttgactttgacgtagaaata
gcgataaaagtttgccgacaagcatcaccggaggatgctctactacttgcacagaaacac
ggtaaacacgaatggtatcttcgtattcaaatcgaagacaaacaagaatataaaaaggct
ttagaatacatggcaactttagaattcgaagaggcggaagctaatatgaagaaatatgga
aatatcttaatagaaaatgtgccaaatgaatccacacaatttttgaaagccttgtgcaca
aattataaaccatccaacaaacctcttgtagatcaggaagctttgaatggttatacagaa
cagcgtgttgataaagctagtccagaagattttattcatttatttctaaataattctgaa
cgactcgtagaattcttggagcatttagttaaatcagatacaaggtggagtacacttatt
tacaacaccttagtggaacattatttacatgtttggtcggcattagataacgatgtagct
aaattacaatatgaacagaaagttgtacgacttctgcagaattccgaggcccgttatgat
aaagaccaaatattaatactttgtcaccaacataatttcagaaaaggattacttttcctt
tacgaagaaagcaagctatatcaagaaatattaagatttcatttatgcgagggagatagc
gaacaagttctcgctacctgcaaaagattcggtcatcaggatcctaatctatgggtacaa
gctttatggagtgtggctaaaaacaaggatgcaccaacaaaacttctcgcggatatatta
gcttatatcgctcaagaaagactattatctcctttaatggtcattgacgcaatttctaca
tcattgacctgcacactgggagacgttagaagttatttgtgcagtgtattacgaacagaa
aatgagcaaactcaagctgacacggaattaacagagaaatatagagctgatactcttaaa
ttgcgagaacaaatagaagcaataaagaataatacgataatttttcaaggatcacgatgt
agcgcatgccatcatcaattggaattgccatctgtgcatttcatgtgtcaacattcttat
catcaacattgttttcaaagcttttcggaaaatgaaaatgaatgcccagcttgcttgcca
aataacaagaaattattggatattataagagcgcaagaacagtcaagagatttacatgaa
actttccacagtcttctcgatcgagcagaagatccattttccttagtagccgattatttt
ggtagaggcgtttttaaaaaattaacagtaatcactgatacagacaaatcactacctaca
ccgaccaagttggaggaacctaagttaaattatggaccaggtgcagaagcgagactcaga
ttgaatgaaggaaagagttctatctcaggaaaaatagagcctcgacgagctggatatgac
gttcctacattaataacggaagaacgtttccgtaattttgtcaagccagatgtgtattct
tcatcgttggaggcgaatatatcaggaacgggaagcggtttatcgacgccacgcggtaac
tctgctaaagcttcgccggtgccgattagagaagcccgcattttaaacagtactacacca
aagtcatcgccaatcgataagtcttttgtttcgaaaacccctattgtgtcatcaaatccc
tttgaaactgacgattatgatgaatctaaaaatccctttgctaacgatgacgatgatgat
gacgcgaataatccttttaaagacgatgataatgataatgatcgggttggcaacgatgac
gatgattacaataaaaatctaaatccattcggtaggtaa
DBGET
integrated database retrieval system
