Atta colombica: 108692453
Help
Entry
108692453 CDS
T11098
Name
(RefSeq) transcription factor SOX-9-like
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoc03000
]
108692453
Transcription factors [BR:
acoc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108692453
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Sox_N
HMG_WDHD1
PE
ZER1-like_2nd
Motif
Other DBs
NCBI-GeneID:
108692453
NCBI-ProteinID:
XP_018056191
UniProt:
A0A195BW04
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MKMNDVKPESSGASISPAGGNNNNNNINGNGKTSATAAAAAAAAAATVAANGGEGISAAV
AKVLQGYDWTLVPVATKGSGDKRAAHVKRPMNAFMVWAQAARRKLADQYPQLHNAELSKT
LGKLWRLLSDNDKKPFIEEADRLRVIHKREHPDYKYQPRRRKQNGPTSGRESSPTRSQSN
VTFSVTRSLKQEDMSPRGVQGPNSPQSGVSSSPPTTPSQGLSPPTPPTTPRGQHYINQSN
QLPQNNTVYYQDLVNGTPSSESPHQQPAVDLRYIEVGDGLSGEENQLNGLGTLDGLDLNL
PVNFQECESNELDLYLPPQTAPIHQYPPVQVTTASQWLLNRYEEEIERPIKRHCSEQAIA
EVSSWEDRTQEMVRYHELQPPLPPVQYISAHNAHHSHASTQMGHPHVSTPYAQYAHRYVS
GIETWPNYM
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaacgacgtcaaaccggaaagcagcggcgcgtcgatttcgccggcgggcgga
aacaataacaacaataacatcaatggaaatggcaaaacgtcagcaacggccgccgcagca
gccgccgctgccgcggcgacggtggccgccaatggcggcgaagggattagtgctgccgtt
gccaaggttctccaaggatacgactggaccttggtacctgttgccaccaagggctccggc
gacaaaagggcggcccacgtcaagaggcccatgaatgcgtttatggtatgggcccaagct
gcgaggcgaaaactggctgatcagtatccccagcttcacaacgccgagctgtcgaaaaca
ctgggaaaattatggcggctcctgtccgacaatgacaagaaacccttcatcgaggaggct
gaccgcttgcgcgttattcacaaacgcgagcaccccgattacaagtatcaaccacgacgt
cggaagcagaacgggccgacatccggccgagaaagttcgcccacaaggagtcagagcaac
gtaacgttcagtgttaccaggtcgttgaagcaggaggacatgagtcctagaggtgttcaa
ggacccaattcaccgcaaagtggcgtaagctcttcgccacccacgacacccagtcagggt
ctttcaccgccgacacctcctacaacgcccaggggacaacactatatcaatcagagtaat
cagcttccacagaacaacacggtgtattaccaggatttggtcaacggcacaccatcgagt
gaatccccacatcaacaaccagcggttgatcttcgatatatcgaggtcggagatggcctc
tccggcgaagagaaccagttaaatggcctcggaactttggacggactcgatctgaatctt
ccggtgaacttccaggagtgtgagagcaatgagctcgatctatacttaccaccccagact
gcaccaatacatcagtacccgcccgtgcaagtcaccaccgcctcgcaatggttactcaac
agatacgaggaggagatcgagagaccgatcaagcgtcactgttcagagcaggcgatcgcg
gaggtatcgtcatgggaggacaggactcaggagatggtcaggtaccacgagttgcagcct
ccccttccgccagtccagtacatatccgcccataacgcgcaccattcgcacgcgagtacg
cagatgggccatccgcacgtgtccacgccctatgcgcaatacgcacatcgctacgtgtct
ggtattgagacgtggccgaattatatgtag
DBGET
integrated database retrieval system
